RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 ECM29Q5VYK3 1845 aa16.63■□□□□ 0.25
UBR4-210ENST00000466969 PDHXO00330 501 aa16.62■□□□□ 0.25
UBR4-210ENST00000466969 IRF6O14896 467 aa16.62■□□□□ 0.25
UBR4-210ENST00000466969 GTF2IP78347 998 aa16.62■□□□□ 0.25
UBR4-210ENST00000466969 PROSER3Q2NL68 480 aa16.62■□□□□ 0.25
UBR4-210ENST00000466969 ERO1BQ86YB8 467 aa16.62■□□□□ 0.25
UBR4-210ENST00000466969 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.62■□□□□ 0.25
UBR4-210ENST00000466969 TTYH1Q9H313 450 aaPredicted RBP16.62■□□□□ 0.25
UBR4-210ENST00000466969 TAOK2Q9UL54 1235 aa16.62■□□□□ 0.25
UBR4-210ENST00000466969 BDP1A6H8Y1 2624 aa16.61■□□□□ 0.25
UBR4-210ENST00000466969 SPDYE2BA6NHP3 402 aa16.61■□□□□ 0.25
UBR4-210ENST00000466969 SPDYE6P0CI01 402 aa16.61■□□□□ 0.25
UBR4-210ENST00000466969 HSP90B1P14625 803 aaKnown RBP16.61■□□□□ 0.25
UBR4-210ENST00000466969 IRF5Q13568 498 aa16.61■□□□□ 0.25
UBR4-210ENST00000466969 CFAP100Q494V2 611 aa16.61■□□□□ 0.25
UBR4-210ENST00000466969 ANKRD23Q86SG2 305 aa16.61■□□□□ 0.25
UBR4-210ENST00000466969 ANKRD18AQ8IVF6 992 aa16.61■□□□□ 0.25
UBR4-210ENST00000466969 ASB2Q96Q27 587 aa16.61■□□□□ 0.25
UBR4-210ENST00000466969 P2RX7Q99572 595 aaKnown RBP16.61■□□□□ 0.25
UBR4-210ENST00000466969 PCDHAC2Q9Y5I4 1007 aa16.61■□□□□ 0.25
UBR4-210ENST00000466969 COL3A1P02461 1466 aaPredicted RBP16.61■□□□□ 0.25
UBR4-210ENST00000466969 EIF4G2P78344 907 aaKnown RBP eCLIP16.6■□□□□ 0.25
UBR4-210ENST00000466969 CCDC152Q4G0S7 254 aa16.6■□□□□ 0.25
UBR4-210ENST00000466969 PRMT6Q96LA8 375 aaPredicted RBP16.6■□□□□ 0.25
UBR4-210ENST00000466969 RBM5P52756 815 aaKnown RBP eCLIP16.59■□□□□ 0.25
UBR4-210ENST00000466969 LRFN3Q9BTN0 628 aa16.59■□□□□ 0.25
UBR4-210ENST00000466969 DDX60LQ5H9U9 1706 aaKnown RBP16.59■□□□□ 0.25
UBR4-210ENST00000466969 MGAMO43451 1857 aa16.59■□□□□ 0.25
UBR4-210ENST00000466969 MUC6Q6W4X9 2439 aa16.58■□□□□ 0.25
UBR4-210ENST00000466969 F8W031 263 aaPredicted RBP16.58■□□□□ 0.24
UBR4-210ENST00000466969 TNPO2O14787 897 aaKnown RBP16.58■□□□□ 0.24
UBR4-210ENST00000466969 SMAD3P84022 425 aaKnown RBP16.58■□□□□ 0.24
UBR4-210ENST00000466969 PPIL2Q13356 520 aa16.58■□□□□ 0.24
UBR4-210ENST00000466969 PARK7Q99497 189 aaKnown RBP16.58■□□□□ 0.24
UBR4-210ENST00000466969 THEGQ9P2T0 379 aa16.58■□□□□ 0.24
UBR4-210ENST00000466969 ATP5J2-PTCD1G3V325 749 aa16.57■□□□□ 0.24
UBR4-210ENST00000466969 CCT4P50991 539 aaKnown RBP16.57■□□□□ 0.24
UBR4-210ENST00000466969 MRPS5P82675 430 aaKnown RBP16.57■□□□□ 0.24
UBR4-210ENST00000466969 HMX1Q9NP08 348 aaPredicted RBP16.57■□□□□ 0.24
UBR4-210ENST00000466969 SNCAIPQ9Y6H5 919 aa16.57■□□□□ 0.24
UBR4-210ENST00000466969 PFASO15067 1338 aa16.56■□□□□ 0.24
UBR4-210ENST00000466969 BCRP11274 1271 aa16.56■□□□□ 0.24
UBR4-210ENST00000466969 CCDC85AQ96PX6 553 aaPredicted RBP16.56■□□□□ 0.24
UBR4-210ENST00000466969 ISCA1Q9BUE6 129 aa16.56■□□□□ 0.24
UBR4-210ENST00000466969 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.55■□□□□ 0.24
UBR4-210ENST00000466969 PPM1EQ8WY54 764 aa16.55■□□□□ 0.24
UBR4-210ENST00000466969 OGDHLQ9ULD0 1010 aa16.55■□□□□ 0.24
UBR4-210ENST00000466969 MRE11P49959 708 aa16.54■□□□□ 0.24
UBR4-210ENST00000466969 LRRC26Q2I0M4 334 aa16.54■□□□□ 0.24
UBR4-210ENST00000466969 TXNRD3Q86VQ6 643 aa16.54■□□□□ 0.24
UBR4-210ENST00000466969 TEPSINQ96N21 525 aa16.54■□□□□ 0.24
UBR4-210ENST00000466969 WRNIP1Q96S55 665 aa16.54■□□□□ 0.24
UBR4-210ENST00000466969 PRKAG2Q9UGJ0 569 aa16.54■□□□□ 0.24
UBR4-210ENST00000466969 NUDCQ9Y266 331 aa16.54■□□□□ 0.24
UBR4-210ENST00000466969 AOX1Q06278 1338 aa16.53■□□□□ 0.24
UBR4-210ENST00000466969 TNNI2P48788 182 aa16.53■□□□□ 0.24
UBR4-210ENST00000466969 PPATQ06203 517 aa16.53■□□□□ 0.24
UBR4-210ENST00000466969 SHHQ15465 462 aa16.53■□□□□ 0.24
UBR4-210ENST00000466969 TMEM31Q5JXX7 168 aa16.53■□□□□ 0.24
UBR4-210ENST00000466969 CC2D1BQ5T0F9 858 aaKnown RBP16.53■□□□□ 0.24
UBR4-210ENST00000466969 CDAN1Q8IWY9 1227 aa16.53■□□□□ 0.24
UBR4-210ENST00000466969 PLBD2Q8NHP8 589 aa16.53■□□□□ 0.24
UBR4-210ENST00000466969 ZKSCAN4Q969J2 545 aaPredicted RBP16.53■□□□□ 0.24
UBR4-210ENST00000466969 COA7Q96BR5 231 aa16.53■□□□□ 0.24
UBR4-210ENST00000466969 CDC5LQ99459 802 aaKnown RBP16.53■□□□□ 0.24
UBR4-210ENST00000466969 MINPP1Q9UNW1 487 aa16.53■□□□□ 0.24
UBR4-210ENST00000466969 HMGCRP04035 888 aa16.52■□□□□ 0.24
UBR4-210ENST00000466969 U2AF1L5P0DN76 240 aaPredicted RBP16.52■□□□□ 0.24
UBR4-210ENST00000466969 CYP2C8P10632 490 aa16.52■□□□□ 0.24
UBR4-210ENST00000466969 U2AF1Q01081 240 aaKnown RBP eCLIP16.52■□□□□ 0.242e-22■■■■■ 36.6
UBR4-210ENST00000466969 CERS5Q8N5B7 392 aa16.52■□□□□ 0.24
UBR4-210ENST00000466969 TMEM39BQ9GZU3 492 aa16.52■□□□□ 0.24
UBR4-210ENST00000466969 ZNF70Q9UC06 446 aaPredicted RBP16.52■□□□□ 0.24
UBR4-210ENST00000466969 LEMD3Q9Y2U8 911 aa16.52■□□□□ 0.24
UBR4-210ENST00000466969 SPDYE2Q495Y8 402 aa16.51■□□□□ 0.23
UBR4-210ENST00000466969 ZBTB38Q8NAP3 1195 aaPredicted RBP16.51■□□□□ 0.23
UBR4-210ENST00000466969 TCP10L2B9ZVM9 353 aa16.5■□□□□ 0.23
UBR4-210ENST00000466969 PDE8AO60658 829 aa16.5■□□□□ 0.23
UBR4-210ENST00000466969 GRIN2CQ14957 1233 aa16.5■□□□□ 0.23
UBR4-210ENST00000466969 CFAP53Q96M91 514 aa16.5■□□□□ 0.23
UBR4-210ENST00000466969 BSDC1Q9NW68 430 aaPredicted RBP16.5■□□□□ 0.23
UBR4-210ENST00000466969 COL6A1P12109 1028 aa16.49■□□□□ 0.23
UBR4-210ENST00000466969 C9orf50Q5SZB4 431 aa16.49■□□□□ 0.23
UBR4-210ENST00000466969 TDRD3Q9H7E2 651 aaKnown RBP16.49■□□□□ 0.23
UBR4-210ENST00000466969 CD209Q9NNX6 404 aa16.49■□□□□ 0.23
UBR4-210ENST00000466969 TSPYL4Q9UJ04 414 aa16.49■□□□□ 0.23
UBR4-210ENST00000466969 KCNH4Q9UQ05 1017 aa16.49■□□□□ 0.23
UBR4-210ENST00000466969 TRIM28Q13263 835 aaKnown RBP16.48■□□□□ 0.23
UBR4-210ENST00000466969 NECAB3Q96P71 396 aaPredicted RBP16.48■□□□□ 0.23
UBR4-210ENST00000466969 GAS2L1Q99501 681 aaPredicted RBP16.48■□□□□ 0.23
UBR4-210ENST00000466969 NEFMP07197 916 aa16.47■□□□□ 0.23
UBR4-210ENST00000466969 PDE3AQ14432 1141 aa16.47■□□□□ 0.23
UBR4-210ENST00000466969 HOOK2Q96ED9 719 aa16.47■□□□□ 0.23
UBR4-210ENST00000466969 EPHX3Q9H6B9 360 aa16.47■□□□□ 0.23
UBR4-210ENST00000466969 KLRK1P26718 216 aa16.46■□□□□ 0.23
UBR4-210ENST00000466969 RIC3Q7Z5B4 369 aa16.46■□□□□ 0.23
UBR4-210ENST00000466969 DNAH12Q6ZR08 3092 aa16.45■□□□□ 0.22
UBR4-210ENST00000466969 KCNJ4P48050 445 aa16.45■□□□□ 0.22
UBR4-210ENST00000466969 FKBP1AP62942 108 aaKnown RBP16.45■□□□□ 0.22
UBR4-210ENST00000466969 TRIM32Q13049 653 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms