RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 TTLL5Q6EMB2 1281 aa17.12■□□□□ 0.33
HDAC6-215ENST00000465457 CDAN1Q8IWY9 1227 aa17.12■□□□□ 0.33
HDAC6-215ENST00000465457 CCDC191Q8NCU4 936 aa17.12■□□□□ 0.33
HDAC6-215ENST00000465457 SH3TC2Q8TF17 1288 aa17.12■□□□□ 0.33
HDAC6-215ENST00000465457 CWC25Q9NXE8 425 aaPredicted RBP17.12■□□□□ 0.33
HDAC6-215ENST00000465457 ARAP2Q8WZ64 1704 aa17.12■□□□□ 0.33
HDAC6-215ENST00000465457 FKBP5Q13451 457 aaPredicted RBP17.11■□□□□ 0.33
HDAC6-215ENST00000465457 SLC4A8Q2Y0W8 1093 aa17.11■□□□□ 0.33
HDAC6-215ENST00000465457 TTLL11Q8NHH1 800 aa17.11■□□□□ 0.33
HDAC6-215ENST00000465457 ARHGAP39Q9C0H5 1083 aa17.11■□□□□ 0.33
HDAC6-215ENST00000465457 ELP3Q9H9T3 547 aa17.11■□□□□ 0.33
HDAC6-215ENST00000465457 BSDC1Q9NW68 430 aaPredicted RBP17.11■□□□□ 0.33
HDAC6-215ENST00000465457 F8W031 263 aaPredicted RBP17.1■□□□□ 0.33
HDAC6-215ENST00000465457 SNAP23O00161 211 aa17.1■□□□□ 0.33
HDAC6-215ENST00000465457 SHISA4Q96DD7 197 aa17.1■□□□□ 0.33
HDAC6-215ENST00000465457 CDC5LQ99459 802 aaKnown RBP17.1■□□□□ 0.33
HDAC6-215ENST00000465457 ZNF804BA4D1E1 1349 aa17.1■□□□□ 0.33
HDAC6-215ENST00000465457 TESPA1A2RU30 521 aaPredicted RBP17.09■□□□□ 0.33
HDAC6-215ENST00000465457 PPP1R12BO60237 982 aaPredicted RBP17.09■□□□□ 0.33
HDAC6-215ENST00000465457 USP2O75604 605 aaPredicted RBP17.09■□□□□ 0.33
HDAC6-215ENST00000465457 DLGAP5Q15398 846 aa17.09■□□□□ 0.33
HDAC6-215ENST00000465457 RPAP2Q8IXW5 612 aaPredicted RBP17.09■□□□□ 0.33
HDAC6-215ENST00000465457 BRI3BPQ8WY22 251 aa17.09■□□□□ 0.33
HDAC6-215ENST00000465457 MS4A4AQ96JQ5 239 aa17.09■□□□□ 0.33
HDAC6-215ENST00000465457 JAG2Q9Y219 1238 aa17.09■□□□□ 0.33
HDAC6-215ENST00000465457 ECM2O94769 699 aaPredicted RBP17.08■□□□□ 0.32
HDAC6-215ENST00000465457 GNAI3P08754 354 aa17.08■□□□□ 0.32
HDAC6-215ENST00000465457 PDE4AP27815 886 aa17.08■□□□□ 0.32
HDAC6-215ENST00000465457 OPTNQ96CV9 577 aa17.08■□□□□ 0.32
HDAC6-215ENST00000465457 BACH2Q9BYV9 841 aa17.08■□□□□ 0.32
HDAC6-215ENST00000465457 VEZTQ9HBM0 779 aa17.08■□□□□ 0.32
HDAC6-215ENST00000465457 IRS2Q9Y4H2 1338 aa17.07■□□□□ 0.32
HDAC6-215ENST00000465457 IGKV5-2P06315 115 aa17.07■□□□□ 0.32
HDAC6-215ENST00000465457 HSP90B1P14625 803 aaKnown RBP17.07■□□□□ 0.32
HDAC6-215ENST00000465457 CFAP100Q494V2 611 aa17.07■□□□□ 0.32
HDAC6-215ENST00000465457 OTUD7BQ6GQQ9 843 aa17.07■□□□□ 0.32
HDAC6-215ENST00000465457 G2E3Q7L622 706 aa17.07■□□□□ 0.32
HDAC6-215ENST00000465457 FAM43AQ8N2R8 423 aa17.07■□□□□ 0.32
HDAC6-215ENST00000465457 PRMT6Q96LA8 375 aaPredicted RBP17.07■□□□□ 0.32
HDAC6-215ENST00000465457 METTL22Q9BUU2 404 aaPredicted RBP17.07■□□□□ 0.32
HDAC6-215ENST00000465457 ALPK3Q96L96 1907 aa17.06■□□□□ 0.32
HDAC6-215ENST00000465457 SPDYE2BA6NHP3 402 aa17.06■□□□□ 0.32
HDAC6-215ENST00000465457 SPDYE6P0CI01 402 aa17.06■□□□□ 0.32
HDAC6-215ENST00000465457 RGS3P49796 1198 aa17.06■□□□□ 0.32
HDAC6-215ENST00000465457 TAF1CQ15572 869 aaPredicted RBP17.06■□□□□ 0.32
HDAC6-215ENST00000465457 SLC17A8Q8NDX2 589 aa17.06■□□□□ 0.32
HDAC6-215ENST00000465457 PPP2R3BQ9Y5P8 575 aa17.06■□□□□ 0.32
HDAC6-215ENST00000465457 HMMRO75330 724 aa17.05■□□□□ 0.32
HDAC6-215ENST00000465457 IREB2P48200 963 aaKnown RBP17.05■□□□□ 0.32
HDAC6-215ENST00000465457 RASA3Q14644 834 aa17.05■□□□□ 0.32
HDAC6-215ENST00000465457 MTFR1Q15390 333 aa17.05■□□□□ 0.32
HDAC6-215ENST00000465457 CWF19L2Q2TBE0 894 aaKnown RBP17.05■□□□□ 0.32
HDAC6-215ENST00000465457 ANKRD13AQ8IZ07 590 aa17.05■□□□□ 0.32
HDAC6-215ENST00000465457 ANKRD44Q8N8A2 993 aa17.05■□□□□ 0.32
HDAC6-215ENST00000465457 MTMR14Q8NCE2 650 aa17.05■□□□□ 0.32
HDAC6-215ENST00000465457 PRO3102Q9H379 93 aa17.05■□□□□ 0.32
HDAC6-215ENST00000465457 CD209Q9NNX6 404 aa17.05■□□□□ 0.32
HDAC6-215ENST00000465457 MAP3K2Q9Y2U5 619 aa17.05■□□□□ 0.32
HDAC6-215ENST00000465457 LEMD3Q9Y2U8 911 aa17.05■□□□□ 0.32
HDAC6-215ENST00000465457 CCL15-CCL14A0A0B4J2E2 113 aa17.04■□□□□ 0.32
HDAC6-215ENST00000465457 SOX1O00570 391 aaPredicted RBP17.04■□□□□ 0.32
HDAC6-215ENST00000465457 DDX58O95786 925 aaKnown RBP17.04■□□□□ 0.32
HDAC6-215ENST00000465457 NUCB1Q02818 461 aa17.04■□□□□ 0.32
HDAC6-215ENST00000465457 CCL15Q16663 113 aa17.04■□□□□ 0.32
HDAC6-215ENST00000465457 SLC4A10Q6U841 1118 aa17.04■□□□□ 0.32
HDAC6-215ENST00000465457 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.04■□□□□ 0.32
HDAC6-215ENST00000465457 NBPF11Q86T75 865 aa17.04■□□□□ 0.32
HDAC6-215ENST00000465457 HDAC5Q9UQL6 1122 aa17.04■□□□□ 0.32
HDAC6-215ENST00000465457 CTGFP29279 349 aa17.03■□□□□ 0.32
HDAC6-215ENST00000465457 MMP14P50281 582 aa17.03■□□□□ 0.32
HDAC6-215ENST00000465457 SUPT20HL1Q3ZLR7 823 aa17.03■□□□□ 0.32
HDAC6-215ENST00000465457 UNCXA6NJT0 531 aa17.02■□□□□ 0.32
HDAC6-215ENST00000465457 GNAI2P04899 355 aa17.02■□□□□ 0.32
HDAC6-215ENST00000465457 CHRNDQ07001 517 aa17.02■□□□□ 0.32
HDAC6-215ENST00000465457 VGLL4Q14135 290 aa17.02■□□□□ 0.32
HDAC6-215ENST00000465457 UBE3BQ7Z3V4 1068 aa17.02■□□□□ 0.32
HDAC6-215ENST00000465457 DPF3Q92784 378 aa17.02■□□□□ 0.32
HDAC6-215ENST00000465457 TEPSINQ96N21 525 aa17.02■□□□□ 0.32
HDAC6-215ENST00000465457 SRCIN1Q9C0H9 1055 aa17.02■□□□□ 0.32
HDAC6-215ENST00000465457 UNC80Q8N2C7 3258 aa17.02■□□□□ 0.31
HDAC6-215ENST00000465457 MGAMO43451 1857 aa17.01■□□□□ 0.31
HDAC6-215ENST00000465457 F6X3S4 739 aa17.01■□□□□ 0.31
HDAC6-215ENST00000465457 TAF5LO75529 589 aa17.01■□□□□ 0.31
HDAC6-215ENST00000465457 ITGA6P23229 1130 aa17.01■□□□□ 0.31
HDAC6-215ENST00000465457 IGHMBP2P38935 993 aaKnown RBP17.01■□□□□ 0.31
HDAC6-215ENST00000465457 CEP85Q6P2H3 762 aa17.01■□□□□ 0.31
HDAC6-215ENST00000465457 HELBQ8NG08 1087 aaPredicted RBP17.01■□□□□ 0.31
HDAC6-215ENST00000465457 DNAAF4Q8WXU2 420 aa17.01■□□□□ 0.31
HDAC6-215ENST00000465457 MEIS3Q99687 375 aa17.01■□□□□ 0.31
HDAC6-215ENST00000465457 ZFYVE28Q9HCC9 887 aa17.01■□□□□ 0.31
HDAC6-215ENST00000465457 PI4KAP2A4QPH2 592 aa17■□□□□ 0.31
HDAC6-215ENST00000465457 ANP32AP39687 249 aaKnown RBP17■□□□□ 0.31
HDAC6-215ENST00000465457 KCNJ4P48050 445 aa17■□□□□ 0.31
HDAC6-215ENST00000465457 LACTBP83111 547 aaPredicted RBP17■□□□□ 0.31
HDAC6-215ENST00000465457 UBE2Q1Q7Z7E8 422 aa17■□□□□ 0.31
HDAC6-215ENST00000465457 CHD1LQ86WJ1 897 aa17■□□□□ 0.31
HDAC6-215ENST00000465457 PI4KAP1Q8N8J0 262 aa17■□□□□ 0.31
HDAC6-215ENST00000465457 LRCH3Q96II8 777 aa17■□□□□ 0.31
HDAC6-215ENST00000465457 C1orf115Q9H7X2 142 aa17■□□□□ 0.31
HDAC6-215ENST00000465457 ZBTB47Q9UFB7 747 aaPredicted RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms