RNA–Protein interactions for RNA: ENST00000464451.5

SEC61A1-203, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 1,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-203ENST00000464451 CCDC173Q0VFZ6 552 aa14.37□□□□□ -0.11
SEC61A1-203ENST00000464451 ME3Q16798 604 aa14.37□□□□□ -0.11
SEC61A1-203ENST00000464451 LRRC24Q50LG9 513 aa14.37□□□□□ -0.11
SEC61A1-203ENST00000464451 KBTBD3Q8NAB2 608 aa14.37□□□□□ -0.11
SEC61A1-203ENST00000464451 ZNF526Q8TF50 670 aaPredicted RBP14.37□□□□□ -0.11
SEC61A1-203ENST00000464451 PSMD1Q99460 953 aa14.37□□□□□ -0.11
SEC61A1-203ENST00000464451 LRRC37AA6NMS7 1700 aa14.36□□□□□ -0.11
SEC61A1-203ENST00000464451 LTBP3Q9NS15 1303 aa14.36□□□□□ -0.11
SEC61A1-203ENST00000464451 UFL1O94874 794 aa14.36□□□□□ -0.11
SEC61A1-203ENST00000464451 RPS6KB1P23443 525 aa14.36□□□□□ -0.11
SEC61A1-203ENST00000464451 GJB2P29033 226 aa14.36□□□□□ -0.11
SEC61A1-203ENST00000464451 CHRNDQ07001 517 aa14.36□□□□□ -0.11
SEC61A1-203ENST00000464451 MCMDC2Q4G0Z9 681 aa14.36□□□□□ -0.11
SEC61A1-203ENST00000464451 TBC1D16Q8TBP0 767 aa14.36□□□□□ -0.11
SEC61A1-203ENST00000464451 NEUROD6Q96NK8 337 aa14.36□□□□□ -0.11
SEC61A1-203ENST00000464451 SBF1O95248 1867 aa14.36□□□□□ -0.11
SEC61A1-203ENST00000464451 CCDC88AQ3V6T2 1871 aa14.36□□□□□ -0.11
SEC61A1-203ENST00000464451 DUOX1Q9NRD9 1551 aa14.36□□□□□ -0.11
SEC61A1-203ENST00000464451 PPIP5K2O43314 1243 aa14.35□□□□□ -0.11
SEC61A1-203ENST00000464451 F13A1P00488 732 aa14.35□□□□□ -0.11
SEC61A1-203ENST00000464451 LRSAM1Q6UWE0 723 aa14.35□□□□□ -0.11
SEC61A1-203ENST00000464451 USP48Q86UV5 1035 aa14.35□□□□□ -0.11
SEC61A1-203ENST00000464451 LARGE2Q8N3Y3 721 aa14.35□□□□□ -0.11
SEC61A1-203ENST00000464451 FBXO3Q9UK99 471 aa14.35□□□□□ -0.11
SEC61A1-203ENST00000464451 TPCN1Q9ULQ1 816 aa14.35□□□□□ -0.11
SEC61A1-203ENST00000464451 U3KPZ7 1027 aaPredicted RBP14.35□□□□□ -0.11
SEC61A1-203ENST00000464451 CHD4Q14839 1912 aa14.35□□□□□ -0.11
SEC61A1-203ENST00000464451 TRIM44Q96DX7 344 aaPredicted RBP14.35□□□□□ -0.11
SEC61A1-203ENST00000464451 PPP1R9BQ96SB3 815 aa14.35□□□□□ -0.11
SEC61A1-203ENST00000464451 RTFDC1Q9BY42 306 aaPredicted RBP14.35□□□□□ -0.11
SEC61A1-203ENST00000464451 GGA1Q9UJY5 639 aa14.35□□□□□ -0.11
SEC61A1-203ENST00000464451 XDHP47989 1333 aa14.34□□□□□ -0.11
SEC61A1-203ENST00000464451 COL4A5P29400 1685 aa14.34□□□□□ -0.11
SEC61A1-203ENST00000464451 WASHC4Q2M389 1173 aa14.34□□□□□ -0.11
SEC61A1-203ENST00000464451 FOXD4L6Q3SYB3 417 aaPredicted RBP14.34□□□□□ -0.11
SEC61A1-203ENST00000464451 GRIPAP1Q4V328 841 aa14.34□□□□□ -0.11
SEC61A1-203ENST00000464451 FOXD4L3Q6VB84 417 aaPredicted RBP14.34□□□□□ -0.11
SEC61A1-203ENST00000464451 RRAGDQ9NQL2 400 aaPredicted RBP14.34□□□□□ -0.11
SEC61A1-203ENST00000464451 PAG1Q9NWQ8 432 aa14.34□□□□□ -0.11
SEC61A1-203ENST00000464451 NDUFB9Q9Y6M9 179 aa14.34□□□□□ -0.11
SEC61A1-203ENST00000464451 ZNF609O15014 1411 aa14.34□□□□□ -0.11
SEC61A1-203ENST00000464451 SYCE3A1L190 88 aa14.33□□□□□ -0.11
SEC61A1-203ENST00000464451 TIMM10P62072 90 aa14.33□□□□□ -0.11
SEC61A1-203ENST00000464451 ST3GAL1Q11201 340 aa14.33□□□□□ -0.11
SEC61A1-203ENST00000464451 DOK7Q18PE1 504 aa14.33□□□□□ -0.11
SEC61A1-203ENST00000464451 CSPP1Q1MSJ5 1256 aa14.33□□□□□ -0.11
SEC61A1-203ENST00000464451 SUPT20HQ8NEM7 779 aa14.33□□□□□ -0.11
SEC61A1-203ENST00000464451 HELLSQ9NRZ9 838 aa14.33□□□□□ -0.11
SEC61A1-203ENST00000464451 PODXL2Q9NZ53 605 aa14.33□□□□□ -0.11
SEC61A1-203ENST00000464451 PDCP20941 246 aa14.33□□□□□ -0.12
SEC61A1-203ENST00000464451 KLRK1P26718 216 aa14.33□□□□□ -0.12
SEC61A1-203ENST00000464451 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.33□□□□□ -0.12
SEC61A1-203ENST00000464451 RBSNQ9H1K0 784 aa14.33□□□□□ -0.12
SEC61A1-203ENST00000464451 GDPD2Q9HCC8 539 aa14.33□□□□□ -0.12
SEC61A1-203ENST00000464451 CEP126Q9P2H0 1117 aa14.33□□□□□ -0.12
SEC61A1-203ENST00000464451 MTMR6Q9Y217 621 aa14.33□□□□□ -0.12
SEC61A1-203ENST00000464451 RIPOR2Q9Y4F9 1068 aa14.33□□□□□ -0.12
SEC61A1-203ENST00000464451 A0A1B0GUL7 405 aa14.32□□□□□ -0.12
SEC61A1-203ENST00000464451 GOLIM4O00461 696 aa14.32□□□□□ -0.12
SEC61A1-203ENST00000464451 GADD45BO75293 160 aaPredicted RBP14.32□□□□□ -0.12
SEC61A1-203ENST00000464451 NECAB1Q8N987 351 aa14.32□□□□□ -0.12
SEC61A1-203ENST00000464451 JDP2Q8WYK2 163 aa14.32□□□□□ -0.12
SEC61A1-203ENST00000464451 NEK1Q96PY6 1258 aa14.32□□□□□ -0.12
SEC61A1-203ENST00000464451 ANKRD2Q9GZV1 360 aa14.32□□□□□ -0.12
SEC61A1-203ENST00000464451 DBNDD1Q9H9R9 158 aa14.32□□□□□ -0.12
SEC61A1-203ENST00000464451 CNPY2Q9Y2B0 182 aa14.32□□□□□ -0.12
SEC61A1-203ENST00000464451 AKAP2Q9Y2D5 859 aa14.32□□□□□ -0.12
SEC61A1-203ENST00000464451 TAF6LQ9Y6J9 622 aa14.32□□□□□ -0.12
SEC61A1-203ENST00000464451 LTBP1Q14766 1721 aa14.32□□□□□ -0.12
SEC61A1-203ENST00000464451 ZNF804BA4D1E1 1349 aa14.32□□□□□ -0.12
SEC61A1-203ENST00000464451 TIAM2Q8IVF5 1701 aa14.31□□□□□ -0.12
SEC61A1-203ENST00000464451 ATP2B4P23634 1241 aa14.31□□□□□ -0.12
SEC61A1-203ENST00000464451 KIAA2012Q0VF49 1180 aa14.31□□□□□ -0.12
SEC61A1-203ENST00000464451 TOB2Q14106 344 aaPredicted RBP14.31□□□□□ -0.12
SEC61A1-203ENST00000464451 METTL24Q5JXM2 366 aa14.31□□□□□ -0.12
SEC61A1-203ENST00000464451 CCDC129Q6ZRS4 1044 aa14.31□□□□□ -0.12
SEC61A1-203ENST00000464451 TXNRD3Q86VQ6 643 aa14.31□□□□□ -0.12
SEC61A1-203ENST00000464451 SEC62Q99442 399 aaKnown RBP14.31□□□□□ -0.12
SEC61A1-203ENST00000464451 ZC3H12CQ9C0D7 883 aaKnown RBP14.31□□□□□ -0.12
SEC61A1-203ENST00000464451 IFIT1P09914 478 aaKnown RBP14.31□□□□□ -0.12
SEC61A1-203ENST00000464451 UBE2HP62256 183 aa14.31□□□□□ -0.12
SEC61A1-203ENST00000464451 LARP1BQ659C4 914 aaKnown RBP14.31□□□□□ -0.12
SEC61A1-203ENST00000464451 NIM1KQ8IY84 436 aa14.31□□□□□ -0.12
SEC61A1-203ENST00000464451 EYA3Q99504 573 aa14.31□□□□□ -0.12
SEC61A1-203ENST00000464451 ZNF541Q9H0D2 1346 aa14.3□□□□□ -0.12
SEC61A1-203ENST00000464451 G3V3G9 751 aa14.3□□□□□ -0.12
SEC61A1-203ENST00000464451 HMGB1P09429 215 aaKnown RBP14.3□□□□□ -0.12
SEC61A1-203ENST00000464451 COL9A3Q14050 684 aaPredicted RBP14.3□□□□□ -0.12
SEC61A1-203ENST00000464451 LRRFIP1Q32MZ4 808 aaKnown RBP14.3□□□□□ -0.12
SEC61A1-203ENST00000464451 ZMYM1Q5SVZ6 1142 aa14.3□□□□□ -0.12
SEC61A1-203ENST00000464451 DCAF8Q5TAQ9 597 aa14.3□□□□□ -0.12
SEC61A1-203ENST00000464451 DSCC1Q9BVC3 393 aa14.3□□□□□ -0.12
SEC61A1-203ENST00000464451 KCNQ5Q9NR82 932 aa14.3□□□□□ -0.12
SEC61A1-203ENST00000464451 MROH5Q6ZUA9 1318 aa14.3□□□□□ -0.12
SEC61A1-203ENST00000464451 ESPNB1AK53 854 aa14.29□□□□□ -0.12
SEC61A1-203ENST00000464451 DDNO94850 711 aaPredicted RBP14.29□□□□□ -0.12
SEC61A1-203ENST00000464451 CHGBP05060 677 aa14.29□□□□□ -0.12
SEC61A1-203ENST00000464451 CYP21A2P08686 494 aa14.29□□□□□ -0.12
SEC61A1-203ENST00000464451 CLCN1P35523 988 aa14.29□□□□□ -0.12
SEC61A1-203ENST00000464451 CCDC158Q5M9N0 1113 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 156.2 ms