RNA–Protein interactions for RNA: ENST00000462715.1

TRAPPC3-205, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 2,428 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-205ENST00000462715 SLX4Q8IY92 1834 aa13.44□□□□□ -0.26
TRAPPC3-205ENST00000462715 DHX16O60231 1041 aaKnown RBP13.44□□□□□ -0.26
TRAPPC3-205ENST00000462715 USP48Q86UV5 1035 aa13.44□□□□□ -0.26
TRAPPC3-205ENST00000462715 CELF1Q92879 486 aaKnown RBP13.44□□□□□ -0.26
TRAPPC3-205ENST00000462715 C21orf2O43822 256 aa13.43□□□□□ -0.26
TRAPPC3-205ENST00000462715 YBX3P16989 372 aaKnown RBP eCLIP13.43□□□□□ -0.269e-6■■■□□ 18.1
TRAPPC3-205ENST00000462715 GRIPAP1Q4V328 841 aa13.43□□□□□ -0.26
TRAPPC3-205ENST00000462715 TMX3Q96JJ7 454 aa13.43□□□□□ -0.26
TRAPPC3-205ENST00000462715 RSPH14Q9UHP6 348 aa13.43□□□□□ -0.26
TRAPPC3-205ENST00000462715 RPAP1Q9BWH6 1393 aaPredicted RBP13.43□□□□□ -0.26
TRAPPC3-205ENST00000462715 ERICH4A6NGS2 130 aa13.43□□□□□ -0.26
TRAPPC3-205ENST00000462715 GUCY2CP25092 1073 aa13.43□□□□□ -0.26
TRAPPC3-205ENST00000462715 CDC25BP30305 580 aa13.43□□□□□ -0.26
TRAPPC3-205ENST00000462715 CCDC93Q567U6 631 aa13.43□□□□□ -0.26
TRAPPC3-205ENST00000462715 CEP135Q66GS9 1140 aa13.43□□□□□ -0.26
TRAPPC3-205ENST00000462715 PLEKHM2Q8IWE5 1019 aa13.43□□□□□ -0.26
TRAPPC3-205ENST00000462715 MPHOSPH8Q99549 860 aa13.43□□□□□ -0.26
TRAPPC3-205ENST00000462715 ZNF219Q9P2Y4 722 aaPredicted RBP13.43□□□□□ -0.26
TRAPPC3-205ENST00000462715 ATP6V0A2Q9Y487 856 aa13.43□□□□□ -0.26
TRAPPC3-205ENST00000462715 ATP6V1DQ9Y5K8 247 aa13.43□□□□□ -0.26
TRAPPC3-205ENST00000462715 ELP1O95163 1332 aa13.43□□□□□ -0.26
TRAPPC3-205ENST00000462715 GSPT1P15170 499 aaKnown RBP13.42□□□□□ -0.26
TRAPPC3-205ENST00000462715 H2AFXP16104 143 aaPredicted RBP13.42□□□□□ -0.26
TRAPPC3-205ENST00000462715 SP8Q8IXZ3 490 aa13.42□□□□□ -0.26
TRAPPC3-205ENST00000462715 IQUBQ8NA54 791 aa13.42□□□□□ -0.26
TRAPPC3-205ENST00000462715 C7orf43Q8WVR3 580 aa13.42□□□□□ -0.26
TRAPPC3-205ENST00000462715 PSD3Q9NYI0 1048 aa13.42□□□□□ -0.26
TRAPPC3-205ENST00000462715 MTX1Q13505 466 aa13.42□□□□□ -0.26
TRAPPC3-205ENST00000462715 NOM1Q5C9Z4 860 aaKnown RBP13.42□□□□□ -0.26
TRAPPC3-205ENST00000462715 CCDC192P0DO97 292 aa13.41□□□□□ -0.26
TRAPPC3-205ENST00000462715 RTKN2Q8IZC4 609 aa13.41□□□□□ -0.26
TRAPPC3-205ENST00000462715 BSDC1Q9NW68 430 aaPredicted RBP13.41□□□□□ -0.26
TRAPPC3-205ENST00000462715 TAF1P21675 1872 aa13.41□□□□□ -0.26
TRAPPC3-205ENST00000462715 ERC2O15083 957 aa13.41□□□□□ -0.26
TRAPPC3-205ENST00000462715 SRGAP3O43295 1099 aa13.41□□□□□ -0.26
TRAPPC3-205ENST00000462715 SLU7O95391 586 aaKnown RBP13.41□□□□□ -0.26
TRAPPC3-205ENST00000462715 CEP120Q8N960 986 aa13.41□□□□□ -0.26
TRAPPC3-205ENST00000462715 C1orf115Q9H7X2 142 aa13.41□□□□□ -0.26
TRAPPC3-205ENST00000462715 FBXO38Q6PIJ6 1188 aa13.4□□□□□ -0.26
TRAPPC3-205ENST00000462715 ARHGAP27Q6ZUM4 889 aa13.4□□□□□ -0.26
TRAPPC3-205ENST00000462715 FAM200AQ8TCP9 573 aa13.4□□□□□ -0.26
TRAPPC3-205ENST00000462715 CAVIN2O95810 425 aa13.4□□□□□ -0.26
TRAPPC3-205ENST00000462715 LDHAL6AQ6ZMR3 332 aa13.4□□□□□ -0.26
TRAPPC3-205ENST00000462715 LRRC37AA6NMS7 1700 aa13.4□□□□□ -0.27
TRAPPC3-205ENST00000462715 UTRNP46939 3433 aa13.39□□□□□ -0.27
TRAPPC3-205ENST00000462715 GADD45BO75293 160 aaPredicted RBP13.39□□□□□ -0.27
TRAPPC3-205ENST00000462715 MCCP23508 829 aa13.39□□□□□ -0.27
TRAPPC3-205ENST00000462715 TPD52L1Q16890 204 aaPredicted RBP13.39□□□□□ -0.27
TRAPPC3-205ENST00000462715 CNNM1Q9NRU3 951 aa13.39□□□□□ -0.27
TRAPPC3-205ENST00000462715 COL4A1P02462 1669 aa13.39□□□□□ -0.27
TRAPPC3-205ENST00000462715 SPEF2Q9C093 1822 aa13.39□□□□□ -0.27
TRAPPC3-205ENST00000462715 ATP8B2P98198 1209 aa13.39□□□□□ -0.27
TRAPPC3-205ENST00000462715 NYAP1Q6ZVC0 841 aa13.39□□□□□ -0.27
TRAPPC3-205ENST00000462715 ZNF594Q96JF6 807 aaPredicted RBP13.39□□□□□ -0.27
TRAPPC3-205ENST00000462715 DCTPP1Q9H773 170 aa13.39□□□□□ -0.27
TRAPPC3-205ENST00000462715 APPP05067 770 aa13.38□□□□□ -0.27
TRAPPC3-205ENST00000462715 ZSCAN25Q6NSZ9 544 aa13.38□□□□□ -0.27
TRAPPC3-205ENST00000462715 CEP85Q6P2H3 762 aa13.38□□□□□ -0.27
TRAPPC3-205ENST00000462715 OLFM4Q6UX06 510 aa13.38□□□□□ -0.27
TRAPPC3-205ENST00000462715 DPP8Q6V1X1 898 aaPredicted RBP13.38□□□□□ -0.27
TRAPPC3-205ENST00000462715 RPAP2Q8IXW5 612 aaPredicted RBP13.38□□□□□ -0.27
TRAPPC3-205ENST00000462715 MPNDQ8N594 471 aa13.38□□□□□ -0.27
TRAPPC3-205ENST00000462715 C16orf45Q96MC5 204 aaPredicted RBP13.38□□□□□ -0.27
TRAPPC3-205ENST00000462715 UBXN6Q9BZV1 441 aa13.38□□□□□ -0.27
TRAPPC3-205ENST00000462715 ANKRD2Q9GZV1 360 aa13.38□□□□□ -0.27
TRAPPC3-205ENST00000462715 TAOK3Q9H2K8 898 aa13.38□□□□□ -0.27
TRAPPC3-205ENST00000462715 ANKIB1Q9P2G1 1089 aa13.38□□□□□ -0.27
TRAPPC3-205ENST00000462715 FBXO3Q9UK99 471 aa13.38□□□□□ -0.27
TRAPPC3-205ENST00000462715 LTBP3Q9NS15 1303 aa13.38□□□□□ -0.27
TRAPPC3-205ENST00000462715 A0A1B0GUL7 405 aa13.38□□□□□ -0.27
TRAPPC3-205ENST00000462715 MYO1CO00159 1063 aa13.38□□□□□ -0.27
TRAPPC3-205ENST00000462715 PTGS1P23219 599 aa13.38□□□□□ -0.27
TRAPPC3-205ENST00000462715 RFX5P48382 616 aaPredicted RBP13.38□□□□□ -0.27
TRAPPC3-205ENST00000462715 PLA2G4DQ86XP0 818 aa13.38□□□□□ -0.27
TRAPPC3-205ENST00000462715 GOLGA5Q8TBA6 731 aa13.38□□□□□ -0.27
TRAPPC3-205ENST00000462715 PSMD1Q99460 953 aa13.38□□□□□ -0.27
TRAPPC3-205ENST00000462715 ARGLU1Q9NWB6 273 aaPredicted RBP13.38□□□□□ -0.27
TRAPPC3-205ENST00000462715 MINPP1Q9UNW1 487 aa13.38□□□□□ -0.27
TRAPPC3-205ENST00000462715 FHOD1Q9Y613 1164 aa13.38□□□□□ -0.27
TRAPPC3-205ENST00000462715 XDHP47989 1333 aa13.37□□□□□ -0.27
TRAPPC3-205ENST00000462715 AP5Z1O43299 807 aa13.37□□□□□ -0.27
TRAPPC3-205ENST00000462715 HMMRO75330 724 aa13.37□□□□□ -0.27
TRAPPC3-205ENST00000462715 TPM1P09493 284 aa13.37□□□□□ -0.27
TRAPPC3-205ENST00000462715 FKBP4Q02790 459 aaKnown RBP eCLIP13.37□□□□□ -0.27
TRAPPC3-205ENST00000462715 PTPN12Q05209 780 aaKnown RBP13.37□□□□□ -0.27
TRAPPC3-205ENST00000462715 DHX8Q14562 1220 aaKnown RBP13.37□□□□□ -0.27
TRAPPC3-205ENST00000462715 RPAINQ86UA6 219 aa13.37□□□□□ -0.27
TRAPPC3-205ENST00000462715 SUPT20HQ8NEM7 779 aa13.37□□□□□ -0.27
TRAPPC3-205ENST00000462715 COPRSQ9NQ92 184 aa13.37□□□□□ -0.27
TRAPPC3-205ENST00000462715 FER1L6Q2WGJ9 1857 aa13.37□□□□□ -0.27
TRAPPC3-205ENST00000462715 PNMA6EA0A0J9YXQ4 647 aa13.37□□□□□ -0.27
TRAPPC3-205ENST00000462715 CCDC186Q7Z3E2 898 aa13.37□□□□□ -0.27
TRAPPC3-205ENST00000462715 SSH3Q8TE77 659 aa13.37□□□□□ -0.27
TRAPPC3-205ENST00000462715 ZNF215Q9UL58 517 aaPredicted RBP13.37□□□□□ -0.27
TRAPPC3-205ENST00000462715 SNED1Q8TER0 1413 aa13.36□□□□□ -0.27
TRAPPC3-205ENST00000462715 MROH5Q6ZUA9 1318 aa13.36□□□□□ -0.27
TRAPPC3-205ENST00000462715 NFKBIEO00221 500 aa13.36□□□□□ -0.27
TRAPPC3-205ENST00000462715 CIAO1O76071 339 aa13.36□□□□□ -0.27
TRAPPC3-205ENST00000462715 GPSM2P81274 684 aa13.36□□□□□ -0.27
TRAPPC3-205ENST00000462715 PTPN14Q15678 1187 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms