RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 LARP6Q9BRS8 491 aaKnown RBP5.63□□□□□ -1.51
PCDH9-203ENST00000456367 ALG1Q9BT22 464 aa5.63□□□□□ -1.51
PCDH9-203ENST00000456367 NESP48681 1621 aa5.63□□□□□ -1.51
PCDH9-203ENST00000456367 PTPDC1A2A3K4 754 aa5.63□□□□□ -1.51
PCDH9-203ENST00000456367 CIB2O75838 187 aa5.63□□□□□ -1.51
PCDH9-203ENST00000456367 UBA7P41226 1012 aa5.63□□□□□ -1.51
PCDH9-203ENST00000456367 CETN1Q12798 172 aa5.63□□□□□ -1.51
PCDH9-203ENST00000456367 DBN1Q16643 649 aa5.63□□□□□ -1.51
PCDH9-203ENST00000456367 CFAP221Q4G0U5 840 aa5.63□□□□□ -1.51
PCDH9-203ENST00000456367 VWA3BQ502W6 1294 aa5.63□□□□□ -1.51
PCDH9-203ENST00000456367 ALS2CLQ60I27 953 aa5.63□□□□□ -1.51
PCDH9-203ENST00000456367 ADALQ6DHV7 355 aa5.63□□□□□ -1.51
PCDH9-203ENST00000456367 C16orf71Q8IYS4 520 aaPredicted RBP5.63□□□□□ -1.51
PCDH9-203ENST00000456367 ARMC2Q8NEN0 867 aa5.63□□□□□ -1.51
PCDH9-203ENST00000456367 CACTINQ8WUQ7 758 aaKnown RBP5.63□□□□□ -1.51
PCDH9-203ENST00000456367 CALML4Q96GE6 196 aa5.63□□□□□ -1.51
PCDH9-203ENST00000456367 CAPZA3Q96KX2 299 aa5.63□□□□□ -1.51
PCDH9-203ENST00000456367 TRIM4Q9C037 500 aa5.63□□□□□ -1.51
PCDH9-203ENST00000456367 KIAA1468Q9P260 1216 aa5.63□□□□□ -1.51
PCDH9-203ENST00000456367 DBF4Q9UBU7 674 aaPredicted RBP5.63□□□□□ -1.51
PCDH9-203ENST00000456367 IQGAP2Q13576 1575 aa5.63□□□□□ -1.51
PCDH9-203ENST00000456367 CDK13Q14004 1512 aaKnown RBP5.63□□□□□ -1.51
PCDH9-203ENST00000456367 E7EVH7 732 aa5.63□□□□□ -1.51
PCDH9-203ENST00000456367 NOL3O60936 208 aaKnown RBP5.63□□□□□ -1.51
PCDH9-203ENST00000456367 VIMP08670 466 aaKnown RBP5.63□□□□□ -1.51
PCDH9-203ENST00000456367 DESP17661 470 aa5.63□□□□□ -1.51
PCDH9-203ENST00000456367 GTF2E1P29083 439 aaPredicted RBP5.63□□□□□ -1.51
PCDH9-203ENST00000456367 TTF1Q15361 905 aaPredicted RBP5.63□□□□□ -1.51
PCDH9-203ENST00000456367 LRRC23Q53EV4 343 aaPredicted RBP5.63□□□□□ -1.51
PCDH9-203ENST00000456367 PHLDB3Q6NSJ2 640 aa5.63□□□□□ -1.51
PCDH9-203ENST00000456367 SEPT14Q6ZU15 432 aa5.63□□□□□ -1.51
PCDH9-203ENST00000456367 IFT81Q8WYA0 676 aa5.63□□□□□ -1.51
PCDH9-203ENST00000456367 N4BP2L2Q92802 583 aaPredicted RBP5.63□□□□□ -1.51
PCDH9-203ENST00000456367 AIDAQ96BJ3 306 aa5.63□□□□□ -1.51
PCDH9-203ENST00000456367 IQSEC3Q9UPP2 1182 aaPredicted RBP5.63□□□□□ -1.51
PCDH9-203ENST00000456367 KIAA0586Q9BVV6 1533 aa5.62□□□□□ -1.51
PCDH9-203ENST00000456367 TCP1P17987 556 aaKnown RBP5.62□□□□□ -1.51
PCDH9-203ENST00000456367 FKBP4Q02790 459 aaKnown RBP eCLIP5.62□□□□□ -1.51
PCDH9-203ENST00000456367 UBXN1Q04323 297 aa5.62□□□□□ -1.51
PCDH9-203ENST00000456367 ZBTB17Q13105 803 aa5.62□□□□□ -1.51
PCDH9-203ENST00000456367 DRP2Q13474 957 aa5.62□□□□□ -1.51
PCDH9-203ENST00000456367 ISM2Q6H9L7 571 aa5.62□□□□□ -1.51
PCDH9-203ENST00000456367 THUMPD2Q9BTF0 503 aaKnown RBP5.62□□□□□ -1.51
PCDH9-203ENST00000456367 NUCKS1Q9H1E3 243 aaKnown RBP5.62□□□□□ -1.51
PCDH9-203ENST00000456367 CXorf56Q9H5V9 222 aa5.62□□□□□ -1.51
PCDH9-203ENST00000456367 SPINK5Q9NQ38 1064 aaPredicted RBP5.62□□□□□ -1.51
PCDH9-203ENST00000456367 SEPT11Q9NVA2 429 aaKnown RBP5.62□□□□□ -1.51
PCDH9-203ENST00000456367 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.62□□□□□ -1.51
PCDH9-203ENST00000456367 HDAC9Q9UKV0 1011 aa5.62□□□□□ -1.51
PCDH9-203ENST00000456367 MTMR6Q9Y217 621 aa5.62□□□□□ -1.51
PCDH9-203ENST00000456367 ITSN2Q9NZM3 1697 aa5.62□□□□□ -1.51
PCDH9-203ENST00000456367 KLF18A0A0U1RQI7 1052 aa5.62□□□□□ -1.51
PCDH9-203ENST00000456367 A0A1W2PQ27 194 aa5.62□□□□□ -1.51
PCDH9-203ENST00000456367 A0A1W2PQ64 194 aa5.62□□□□□ -1.51
PCDH9-203ENST00000456367 A0A1W2PQD8 194 aa5.62□□□□□ -1.51
PCDH9-203ENST00000456367 TRIM75PA6NK02 468 aa5.62□□□□□ -1.51
PCDH9-203ENST00000456367 ATP2A1O14983 1001 aa5.62□□□□□ -1.51
PCDH9-203ENST00000456367 ZBTB16Q05516 673 aa5.62□□□□□ -1.51
PCDH9-203ENST00000456367 APOBRQ0VD83 1088 aa5.62□□□□□ -1.51
PCDH9-203ENST00000456367 DYNC1I2Q13409 638 aaKnown RBP5.62□□□□□ -1.51
PCDH9-203ENST00000456367 ANO1Q5XXA6 986 aa5.62□□□□□ -1.51
PCDH9-203ENST00000456367 IQUBQ8NA54 791 aa5.62□□□□□ -1.51
PCDH9-203ENST00000456367 SEC62Q99442 399 aaKnown RBP5.62□□□□□ -1.51
PCDH9-203ENST00000456367 CNNM2Q9H8M5 875 aa5.62□□□□□ -1.51
PCDH9-203ENST00000456367 STRN4Q9NRL3 753 aa5.62□□□□□ -1.51
PCDH9-203ENST00000456367 EXOC1Q9NV70 894 aa5.62□□□□□ -1.51
PCDH9-203ENST00000456367 TNNQ9UQP3 1299 aa5.62□□□□□ -1.51
PCDH9-203ENST00000456367 CCDC160A6NGH7 325 aa5.62□□□□□ -1.51
PCDH9-203ENST00000456367 RNF40O75150 1001 aa5.62□□□□□ -1.51
PCDH9-203ENST00000456367 TRIM58Q8NG06 486 aa5.62□□□□□ -1.51
PCDH9-203ENST00000456367 OSBPL3Q9H4L5 887 aa5.62□□□□□ -1.51
PCDH9-203ENST00000456367 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.62□□□□□ -1.51
PCDH9-203ENST00000456367 FAN1Q9Y2M0 1017 aa5.62□□□□□ -1.51
PCDH9-203ENST00000456367 TRAPPC8Q9Y2L5 1435 aa5.62□□□□□ -1.51
PCDH9-203ENST00000456367 CCDC194A0A1B0GVG4 234 aa5.62□□□□□ -1.51
PCDH9-203ENST00000456367 IFIT3O14879 490 aaKnown RBP5.62□□□□□ -1.51
PCDH9-203ENST00000456367 ZBTB43O43298 467 aa5.62□□□□□ -1.51
PCDH9-203ENST00000456367 EVI5O60447 810 aa5.62□□□□□ -1.51
PCDH9-203ENST00000456367 SEPT2Q15019 361 aa5.62□□□□□ -1.51
PCDH9-203ENST00000456367 HSP90AA5PQ58FG0 334 aa5.62□□□□□ -1.51
PCDH9-203ENST00000456367 RILPL1Q5EBL4 403 aa5.62□□□□□ -1.51
PCDH9-203ENST00000456367 IQCA1Q86XH1 822 aa5.62□□□□□ -1.51
PCDH9-203ENST00000456367 GBP7Q8N8V2 638 aaPredicted RBP5.62□□□□□ -1.51
PCDH9-203ENST00000456367 DDX54Q8TDD1 881 aaKnown RBP5.62□□□□□ -1.51
PCDH9-203ENST00000456367 DTNBP1Q96EV8 351 aa5.62□□□□□ -1.51
PCDH9-203ENST00000456367 NOX5Q96PH1 765 aa5.62□□□□□ -1.51
PCDH9-203ENST00000456367 NAPBQ9H115 298 aa5.62□□□□□ -1.51
PCDH9-203ENST00000456367 RNF14Q9UBS8 474 aa5.62□□□□□ -1.51
PCDH9-203ENST00000456367 SHANK2Q9UPX8 1470 aa5.61□□□□□ -1.51
PCDH9-203ENST00000456367 F6X3S4 739 aa5.61□□□□□ -1.51
PCDH9-203ENST00000456367 NDC80O14777 642 aa5.61□□□□□ -1.51
PCDH9-203ENST00000456367 ZNF202O95125 648 aa5.61□□□□□ -1.51
PCDH9-203ENST00000456367 NLRP6P59044 892 aa5.61□□□□□ -1.51
PCDH9-203ENST00000456367 KMT5BQ4FZB7 885 aa5.61□□□□□ -1.51
PCDH9-203ENST00000456367 FYB2Q5VWT5 728 aa5.61□□□□□ -1.51
PCDH9-203ENST00000456367 CC2D1AQ6P1N0 951 aaPredicted RBP5.61□□□□□ -1.51
PCDH9-203ENST00000456367 CCDC63Q8NA47 563 aa5.61□□□□□ -1.51
PCDH9-203ENST00000456367 SREK1Q8WXA9 508 aaKnown RBP5.61□□□□□ -1.51
PCDH9-203ENST00000456367 JPH2Q9BR39 696 aaPredicted RBP5.61□□□□□ -1.51
PCDH9-203ENST00000456367 PARD6BQ9BYG5 372 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms