RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 PCDHAC2Q9Y5I4 1007 aa34.26■■■■□ 3.08
SMARCC1-203ENST00000454240 MAST3O60307 1309 aa34.26■■■■□ 3.07
SMARCC1-203ENST00000454240 IGHDP01880 384 aa34.25■■■■□ 3.07
SMARCC1-203ENST00000454240 LDHBP07195 334 aaKnown RBP34.25■■■■□ 3.07
SMARCC1-203ENST00000454240 CRKP46108 304 aa34.24■■■■□ 3.07
SMARCC1-203ENST00000454240 PRMT6Q96LA8 375 aaPredicted RBP34.24■■■■□ 3.07
SMARCC1-203ENST00000454240 SNRKQ9NRH2 765 aa34.24■■■■□ 3.07
SMARCC1-203ENST00000454240 GGA3Q9NZ52 723 aa34.24■■■■□ 3.07
SMARCC1-203ENST00000454240 ABCF2Q9UG63 623 aa34.24■■■■□ 3.07
SMARCC1-203ENST00000454240 SPDYE2BA6NHP3 402 aa34.23■■■■□ 3.07
SMARCC1-203ENST00000454240 CENPBP07199 599 aaPredicted RBP34.23■■■■□ 3.07
SMARCC1-203ENST00000454240 SPDYE6P0CI01 402 aa34.23■■■■□ 3.07
SMARCC1-203ENST00000454240 ANGEL2Q5VTE6 544 aaKnown RBP34.23■■■■□ 3.07
SMARCC1-203ENST00000454240 DCPSQ96C86 337 aaKnown RBP34.23■■■■□ 3.07
SMARCC1-203ENST00000454240 PASKQ96RG2 1323 aa34.23■■■■□ 3.07
SMARCC1-203ENST00000454240 MYO5AQ9Y4I1 1855 aaKnown RBP34.22■■■■□ 3.07
SMARCC1-203ENST00000454240 RBM5P52756 815 aaKnown RBP eCLIP34.22■■■■□ 3.07
SMARCC1-203ENST00000454240 SPTY2D1Q68D10 685 aaPredicted RBP34.22■■■■□ 3.07
SMARCC1-203ENST00000454240 CDC37L1Q7L3B6 337 aa34.22■■■■□ 3.07
SMARCC1-203ENST00000454240 TEKT1Q969V4 418 aa34.22■■■■□ 3.07
SMARCC1-203ENST00000454240 PITPNM2Q9BZ72 1349 aa34.22■■■■□ 3.07
SMARCC1-203ENST00000454240 MYH2Q9UKX2 1941 aa34.22■■■■□ 3.07
SMARCC1-203ENST00000454240 HHIPL2Q6UWX4 724 aa34.21■■■■□ 3.07
SMARCC1-203ENST00000454240 TBC1D9Q6ZT07 1266 aa34.21■■■■□ 3.07
SMARCC1-203ENST00000454240 SMC5Q8IY18 1101 aa34.21■■■■□ 3.07
SMARCC1-203ENST00000454240 GLIS2Q9BZE0 524 aaPredicted RBP34.21■■■■□ 3.07
SMARCC1-203ENST00000454240 CYP2E1P05181 493 aaPredicted RBP34.2■■■■□ 3.07
SMARCC1-203ENST00000454240 ZAP70P43403 619 aa34.2■■■■□ 3.07
SMARCC1-203ENST00000454240 PPIL4Q8WUA2 492 aaKnown RBP eCLIP34.2■■■■□ 3.07
SMARCC1-203ENST00000454240 TRPM7Q96QT4 1865 aa34.19■■■■□ 3.06
SMARCC1-203ENST00000454240 ERICH6Q7L0X2 663 aa34.19■■■■□ 3.06
SMARCC1-203ENST00000454240 ZDHHC15Q96MV8 337 aa34.19■■■■□ 3.06
SMARCC1-203ENST00000454240 KRT26Q7Z3Y9 468 aa34.18■■■■□ 3.06
SMARCC1-203ENST00000454240 USP48Q86UV5 1035 aa34.18■■■■□ 3.06
SMARCC1-203ENST00000454240 AOX1Q06278 1338 aa34.18■■■■□ 3.06
SMARCC1-203ENST00000454240 HSPA6P17066 643 aa34.17■■■■□ 3.06
SMARCC1-203ENST00000454240 ANKRD45Q5TZF3 282 aa34.17■■■■□ 3.06
SMARCC1-203ENST00000454240 TRAF5O00463 557 aa34.16■■■■□ 3.06
SMARCC1-203ENST00000454240 MYO1BO43795 1136 aa34.16■■■■□ 3.06
SMARCC1-203ENST00000454240 ATP5JP18859 108 aa34.16■■■■□ 3.06
SMARCC1-203ENST00000454240 DIXDC1Q155Q3 683 aa34.16■■■■□ 3.06
SMARCC1-203ENST00000454240 SULF1Q8IWU6 871 aa34.16■■■■□ 3.06
SMARCC1-203ENST00000454240 FMR1Q06787 632 aaKnown RBP eCLIP34.15■■■■□ 3.064e-7■□□□□ 11.2
SMARCC1-203ENST00000454240 APOBEC3HQ6NTF7 200 aaKnown RBP34.15■■■■□ 3.06
SMARCC1-203ENST00000454240 DZIP1Q86YF9 867 aaKnown RBP34.15■■■■□ 3.06
SMARCC1-203ENST00000454240 NDUFB9Q9Y6M9 179 aa34.15■■■■□ 3.06
SMARCC1-203ENST00000454240 DOCK2Q92608 1830 aa34.14■■■■□ 3.06
SMARCC1-203ENST00000454240 ADM5C9JUS6 153 aa34.14■■■■□ 3.06
SMARCC1-203ENST00000454240 APLP1P51693 650 aa34.14■■■■□ 3.06
SMARCC1-203ENST00000454240 MECOMQ03112 1051 aa34.14■■■■□ 3.06
SMARCC1-203ENST00000454240 ZNF384Q8TF68 577 aa34.14■■■■□ 3.06
SMARCC1-203ENST00000454240 TDRD3Q9H7E2 651 aaKnown RBP34.14■■■■□ 3.06
SMARCC1-203ENST00000454240 LRP2BPQ9P2M1 347 aa34.14■■■■□ 3.06
SMARCC1-203ENST00000454240 DAGLAQ9Y4D2 1042 aa34.14■■■■□ 3.06
SMARCC1-203ENST00000454240 IGSF3O75054 1194 aa34.13■■■■□ 3.05
SMARCC1-203ENST00000454240 NSUN4Q96CB9 384 aaKnown RBP34.13■■■■□ 3.05
SMARCC1-203ENST00000454240 FAM163AQ96GL9 167 aaPredicted RBP34.13■■■■□ 3.05
SMARCC1-203ENST00000454240 PIH1D3Q9NQM4 214 aaKnown RBP34.13■■■■□ 3.05
SMARCC1-203ENST00000454240 ECHDC1Q9NTX5 307 aa34.13■■■■□ 3.05
SMARCC1-203ENST00000454240 CLRN2A0PK11 232 aa34.12■■■■□ 3.05
SMARCC1-203ENST00000454240 SPDYE2Q495Y8 402 aa34.12■■■■□ 3.05
SMARCC1-203ENST00000454240 DLK2Q6UY11 383 aa34.12■■■■□ 3.05
SMARCC1-203ENST00000454240 APOBEC3FQ8IUX4 373 aaKnown RBP34.12■■■■□ 3.05
SMARCC1-203ENST00000454240 ANTXR1Q9H6X2 564 aa34.12■■■■□ 3.05
SMARCC1-203ENST00000454240 RAI14Q9P0K7 980 aa34.12■■■■□ 3.05
SMARCC1-203ENST00000454240 ZNF70Q9UC06 446 aaPredicted RBP34.12■■■■□ 3.05
SMARCC1-203ENST00000454240 ZBTB47Q9UFB7 747 aaPredicted RBP34.12■■■■□ 3.05
SMARCC1-203ENST00000454240 SCAF8Q9UPN6 1271 aaKnown RBP34.12■■■■□ 3.05
SMARCC1-203ENST00000454240 MAST2Q6P0Q8 1798 aa34.12■■■■□ 3.05
SMARCC1-203ENST00000454240 GAKO14976 1311 aa34.11■■■■□ 3.05
SMARCC1-203ENST00000454240 SLF2Q8IX21 1173 aa34.11■■■■□ 3.05
SMARCC1-203ENST00000454240 BOLA2Q9H3K6 86 aa34.11■■■■□ 3.05
SMARCC1-203ENST00000454240 GPATCH3Q96I76 525 aa34.09■■■■□ 3.05
SMARCC1-203ENST00000454240 HAUS7Q99871 368 aa34.09■■■■□ 3.05
SMARCC1-203ENST00000454240 SALL3Q9BXA9 1300 aa34.08■■■■□ 3.05
SMARCC1-203ENST00000454240 GSTO1P78417 241 aa34.08■■■■□ 3.05
SMARCC1-203ENST00000454240 CST9Q5W186 159 aa34.08■■■■□ 3.05
SMARCC1-203ENST00000454240 B4GALNT3Q6L9W6 998 aa34.08■■■■□ 3.05
SMARCC1-203ENST00000454240 OTUD7AQ8TE49 926 aaPredicted RBP34.08■■■■□ 3.05
SMARCC1-203ENST00000454240 MROH7-TTC4A0A0A0MT08 1334 aa34.07■■■■□ 3.05
SMARCC1-203ENST00000454240 NUCB1Q02818 461 aa34.07■■■■□ 3.04
SMARCC1-203ENST00000454240 TTF1Q15361 905 aaPredicted RBP34.07■■■■□ 3.04
SMARCC1-203ENST00000454240 DNAJC2Q99543 621 aaKnown RBP34.07■■■■□ 3.04
SMARCC1-203ENST00000454240 VEZTQ9HBM0 779 aa34.07■■■■□ 3.04
SMARCC1-203ENST00000454240 TTC41PQ6P2S7 1318 aa34.06■■■■□ 3.04
SMARCC1-203ENST00000454240 LDHCP07864 332 aa34.06■■■■□ 3.04
SMARCC1-203ENST00000454240 CDCA5Q96FF9 252 aa34.06■■■■□ 3.04
SMARCC1-203ENST00000454240 TMEM88BA6NKF7 163 aa34.05■■■■□ 3.04
SMARCC1-203ENST00000454240 GOLIM4O00461 696 aa34.05■■■■□ 3.04
SMARCC1-203ENST00000454240 DEFB129Q9H1M3 183 aa34.05■■■■□ 3.04
SMARCC1-203ENST00000454240 GPR75-ASB3A0A0A6YYF3 556 aa34.04■■■■□ 3.04
SMARCC1-203ENST00000454240 IDH1O75874 414 aaKnown RBP34.04■■■■□ 3.04
SMARCC1-203ENST00000454240 TSHZ3Q63HK5 1081 aa34.04■■■■□ 3.04
SMARCC1-203ENST00000454240 NAA16Q6N069 864 aaPredicted RBP34.04■■■■□ 3.04
SMARCC1-203ENST00000454240 CDC42EP5Q6NZY7 148 aa34.04■■■■□ 3.04
SMARCC1-203ENST00000454240 CHD1LQ86WJ1 897 aa34.04■■■■□ 3.04
SMARCC1-203ENST00000454240 EDC3Q96F86 508 aaKnown RBP34.04■■■■□ 3.04
SMARCC1-203ENST00000454240 LNPKQ9C0E8 428 aa34.04■■■■□ 3.04
SMARCC1-203ENST00000454240 CREBZFQ9NS37 354 aa34.04■■■■□ 3.04
SMARCC1-203ENST00000454240 PAG1Q9NWQ8 432 aa34.04■■■■□ 3.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms