RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 CWC25Q9NXE8 425 aaPredicted RBP16.32■□□□□ 0.2
AC004540.1-204ENST00000449537 CTSWP56202 376 aa16.31■□□□□ 0.2
AC004540.1-204ENST00000449537 PRKCZQ05513 592 aa16.31■□□□□ 0.2
AC004540.1-204ENST00000449537 GOLGA2Q08379 1002 aa16.31■□□□□ 0.2
AC004540.1-204ENST00000449537 TTLL11Q8NHH1 800 aa16.31■□□□□ 0.2
AC004540.1-204ENST00000449537 UBE2OQ9C0C9 1292 aaKnown RBP16.31■□□□□ 0.2
AC004540.1-204ENST00000449537 ANKRD2Q9GZV1 360 aa16.31■□□□□ 0.2
AC004540.1-204ENST00000449537 ZNF70Q9UC06 446 aaPredicted RBP16.31■□□□□ 0.2
AC004540.1-204ENST00000449537 OTOFQ9HC10 1997 aa16.31■□□□□ 0.2
AC004540.1-204ENST00000449537 IRF6O14896 467 aa16.3■□□□□ 0.2
AC004540.1-204ENST00000449537 MAGEA10P43363 369 aaPredicted RBP16.3■□□□□ 0.2
AC004540.1-204ENST00000449537 KCNJ4P48050 445 aa16.3■□□□□ 0.2
AC004540.1-204ENST00000449537 FCGRTP55899 365 aa16.3■□□□□ 0.2
AC004540.1-204ENST00000449537 FAM109BQ6ICB4 259 aaPredicted RBP16.3■□□□□ 0.2
AC004540.1-204ENST00000449537 TEPSINQ96N21 525 aa16.3■□□□□ 0.2
AC004540.1-204ENST00000449537 GREM2Q9H772 168 aa16.3■□□□□ 0.2
AC004540.1-204ENST00000449537 CHL1O00533 1208 aa16.29■□□□□ 0.2
AC004540.1-204ENST00000449537 ADCY3O60266 1144 aa16.29■□□□□ 0.2
AC004540.1-204ENST00000449537 HOXB7P09629 217 aa16.29■□□□□ 0.2
AC004540.1-204ENST00000449537 IGHMBP2P38935 993 aaKnown RBP16.29■□□□□ 0.2
AC004540.1-204ENST00000449537 FKBP1AP62942 108 aaKnown RBP16.29■□□□□ 0.2
AC004540.1-204ENST00000449537 SPDYE2Q495Y8 402 aa16.29■□□□□ 0.2
AC004540.1-204ENST00000449537 IRS2Q9Y4H2 1338 aa16.28■□□□□ 0.2
AC004540.1-204ENST00000449537 POTEB2H3BUK9 544 aa16.28■□□□□ 0.2
AC004540.1-204ENST00000449537 SYN1P17600 705 aa16.28■□□□□ 0.2
AC004540.1-204ENST00000449537 PPIL2Q13356 520 aa16.28■□□□□ 0.2
AC004540.1-204ENST00000449537 CDAN1Q8IWY9 1227 aa16.28■□□□□ 0.2
AC004540.1-204ENST00000449537 GUCD1Q96NT3 240 aa16.28■□□□□ 0.2
AC004540.1-204ENST00000449537 CRISPLD2Q9H0B8 497 aa16.28■□□□□ 0.2
AC004540.1-204ENST00000449537 TDRD3Q9H7E2 651 aaKnown RBP16.28■□□□□ 0.2
AC004540.1-204ENST00000449537 GABRQQ9UN88 632 aa16.28■□□□□ 0.2
AC004540.1-204ENST00000449537 SNCAIPQ9Y6H5 919 aa16.28■□□□□ 0.2
AC004540.1-204ENST00000449537 TCP10L2B9ZVM9 353 aa16.27■□□□□ 0.2
AC004540.1-204ENST00000449537 PDHXO00330 501 aa16.27■□□□□ 0.2
AC004540.1-204ENST00000449537 INHAP05111 366 aa16.27■□□□□ 0.2
AC004540.1-204ENST00000449537 TNNI2P48788 182 aa16.27■□□□□ 0.2
AC004540.1-204ENST00000449537 LMOD3Q0VAK6 560 aa16.27■□□□□ 0.2
AC004540.1-204ENST00000449537 ANKRD23Q86SG2 305 aa16.27■□□□□ 0.2
AC004540.1-204ENST00000449537 SYMPKQ92797 1274 aaKnown RBP16.27■□□□□ 0.2
AC004540.1-204ENST00000449537 TMEM39BQ9GZU3 492 aa16.27■□□□□ 0.2
AC004540.1-204ENST00000449537 LAS1LQ9Y4W2 734 aaKnown RBP16.27■□□□□ 0.2
AC004540.1-204ENST00000449537 PXYLP1Q8TE99 480 aa16.26■□□□□ 0.19
AC004540.1-204ENST00000449537 DIS3LQ8TF46 1054 aaKnown RBP16.26■□□□□ 0.19
AC004540.1-204ENST00000449537 ZKSCAN4Q969J2 545 aaPredicted RBP16.26■□□□□ 0.19
AC004540.1-204ENST00000449537 FAM161BQ96MY7 647 aa16.26■□□□□ 0.19
AC004540.1-204ENST00000449537 PAK6Q9NQU5 681 aaPredicted RBP16.26■□□□□ 0.19
AC004540.1-204ENST00000449537 VCANP13611 3396 aa16.26■□□□□ 0.19
AC004540.1-204ENST00000449537 ALPK3Q96L96 1907 aa16.25■□□□□ 0.19
AC004540.1-204ENST00000449537 ADGRA2Q96PE1 1338 aa16.25■□□□□ 0.19
AC004540.1-204ENST00000449537 ELNP15502 786 aa16.25■□□□□ 0.19
AC004540.1-204ENST00000449537 MPHOSPH8Q99549 860 aa16.25■□□□□ 0.19
AC004540.1-204ENST00000449537 PHAXQ9H814 394 aaKnown RBP16.25■□□□□ 0.19
AC004540.1-204ENST00000449537 FAM205AQ6ZU69 1335 aa16.24■□□□□ 0.19
AC004540.1-204ENST00000449537 IL1R1P14778 569 aa16.24■□□□□ 0.19
AC004540.1-204ENST00000449537 FLT3LGP49771 235 aa16.24■□□□□ 0.19
AC004540.1-204ENST00000449537 PPATQ06203 517 aa16.24■□□□□ 0.19
AC004540.1-204ENST00000449537 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.24■□□□□ 0.19
AC004540.1-204ENST00000449537 ANKLE1Q8NAG6 615 aa16.24■□□□□ 0.19
AC004540.1-204ENST00000449537 WRNIP1Q96S55 665 aa16.24■□□□□ 0.19
AC004540.1-204ENST00000449537 METTL22Q9BUU2 404 aaPredicted RBP16.24■□□□□ 0.19
AC004540.1-204ENST00000449537 NBPF3Q9H094 633 aa16.24■□□□□ 0.19
AC004540.1-204ENST00000449537 BCRP11274 1271 aa16.23■□□□□ 0.19
AC004540.1-204ENST00000449537 CHRNDQ07001 517 aa16.23■□□□□ 0.19
AC004540.1-204ENST00000449537 DUSP27Q5VZP5 1158 aa16.23■□□□□ 0.19
AC004540.1-204ENST00000449537 C15orf52Q6ZUT6 534 aaKnown RBP16.23■□□□□ 0.19
AC004540.1-204ENST00000449537 ZNF804AQ7Z570 1209 aa16.23■□□□□ 0.19
AC004540.1-204ENST00000449537 DZIP1LQ8IYY4 767 aaKnown RBP16.23■□□□□ 0.19
AC004540.1-204ENST00000449537 SERPINA10Q9UK55 444 aa16.23■□□□□ 0.19
AC004540.1-204ENST00000449537 JAG2Q9Y219 1238 aa16.23■□□□□ 0.19
AC004540.1-204ENST00000449537 SPEF2Q9C093 1822 aa16.23■□□□□ 0.19
AC004540.1-204ENST00000449537 ZEB1P37275 1124 aaPredicted RBP16.22■□□□□ 0.19
AC004540.1-204ENST00000449537 TMPOP42166 694 aaKnown RBP16.22■□□□□ 0.19
AC004540.1-204ENST00000449537 IRF5Q13568 498 aa16.22■□□□□ 0.19
AC004540.1-204ENST00000449537 TTF2Q9UNY4 1162 aaKnown RBP16.22■□□□□ 0.19
AC004540.1-204ENST00000449537 SNAP23O00161 211 aa16.21■□□□□ 0.19
AC004540.1-204ENST00000449537 PLA2G5P39877 138 aa16.21■□□□□ 0.19
AC004540.1-204ENST00000449537 MAFAQ8NHW3 353 aaPredicted RBP16.21■□□□□ 0.19
AC004540.1-204ENST00000449537 FAM122AQ96E09 287 aa16.21■□□□□ 0.19
AC004540.1-204ENST00000449537 HOOK2Q96ED9 719 aa16.21■□□□□ 0.19
AC004540.1-204ENST00000449537 PARK7Q99497 189 aaKnown RBP16.21■□□□□ 0.19
AC004540.1-204ENST00000449537 RAPGEFL1Q9UHV5 662 aa16.21■□□□□ 0.19
AC004540.1-204ENST00000449537 TTC28Q96AY4 2481 aa16.2■□□□□ 0.18
AC004540.1-204ENST00000449537 ITGA6P23229 1130 aa16.2■□□□□ 0.18
AC004540.1-204ENST00000449537 ZNF697Q5TEC3 545 aa16.2■□□□□ 0.18
AC004540.1-204ENST00000449537 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.2■□□□□ 0.18
AC004540.1-204ENST00000449537 TAF5LO75529 589 aa16.19■□□□□ 0.18
AC004540.1-204ENST00000449537 DDX58O95786 925 aaKnown RBP16.19■□□□□ 0.18
AC004540.1-204ENST00000449537 NEUROD2Q15784 382 aa16.19■□□□□ 0.18
AC004540.1-204ENST00000449537 CDX2Q99626 313 aaPredicted RBP16.19■□□□□ 0.18
AC004540.1-204ENST00000449537 C11orf49Q9H6J7 331 aa16.19■□□□□ 0.18
AC004540.1-204ENST00000449537 TAOK2Q9UL54 1235 aa16.19■□□□□ 0.18
AC004540.1-204ENST00000449537 MGAMO43451 1857 aa16.18■□□□□ 0.18
AC004540.1-204ENST00000449537 TNFRSF10AO00220 468 aa16.18■□□□□ 0.18
AC004540.1-204ENST00000449537 TNPO2O14787 897 aaKnown RBP16.18■□□□□ 0.18
AC004540.1-204ENST00000449537 CYP2C8P10632 490 aa16.18■□□□□ 0.18
AC004540.1-204ENST00000449537 CRKP46108 304 aa16.18■□□□□ 0.18
AC004540.1-204ENST00000449537 MFSD14BQ5SR56 506 aa16.18■□□□□ 0.18
AC004540.1-204ENST00000449537 DCAF15Q66K64 600 aa16.18■□□□□ 0.18
AC004540.1-204ENST00000449537 KCNH4Q9UQ05 1017 aa16.18■□□□□ 0.18
AC004540.1-204ENST00000449537 MDM2Q00987 491 aaPredicted RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms