RNA–Protein interactions for RNA: ENST00000446579.1

LINC00440-201, long intergenic non-protein coding RNA 440, humanhuman

TSL 5 BASIC

Gene LINC00440, Length 734 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00440-201ENST00000446579 WNT8BQ93098 351 aa7.66□□□□□ -1.18
LINC00440-201ENST00000446579 NXPE3Q969Y0 559 aa7.66□□□□□ -1.18
LINC00440-201ENST00000446579 RUSC1Q9BVN2 902 aa7.66□□□□□ -1.18
LINC00440-201ENST00000446579 GOLGA2P5Q9HBQ8 144 aa7.66□□□□□ -1.18
LINC00440-201ENST00000446579 OSGEPQ9NPF4 335 aa7.66□□□□□ -1.18
LINC00440-201ENST00000446579 OAS3Q9Y6K5 1087 aaKnown RBP7.66□□□□□ -1.18
LINC00440-201ENST00000446579 TREHO43280 583 aa7.65□□□□□ -1.18
LINC00440-201ENST00000446579 GAS2O43903 313 aaKnown RBP7.65□□□□□ -1.18
LINC00440-201ENST00000446579 CPNE3O75131 537 aaKnown RBP7.65□□□□□ -1.18
LINC00440-201ENST00000446579 IGHA2P01877 340 aa7.65□□□□□ -1.18
LINC00440-201ENST00000446579 PREPP48147 710 aa7.65□□□□□ -1.18
LINC00440-201ENST00000446579 FMR1Q06787 632 aaKnown RBP eCLIP7.65□□□□□ -1.18
LINC00440-201ENST00000446579 EAPPQ56P03 285 aaPredicted RBP7.65□□□□□ -1.18
LINC00440-201ENST00000446579 SHKBP1Q8TBC3 707 aa7.65□□□□□ -1.18
LINC00440-201ENST00000446579 BSNDQ8WZ55 320 aa7.65□□□□□ -1.18
LINC00440-201ENST00000446579 HHIPQ96QV1 700 aa7.65□□□□□ -1.18
LINC00440-201ENST00000446579 FAM83CQ9BQN1 747 aa7.65□□□□□ -1.18
LINC00440-201ENST00000446579 BHLHE41Q9C0J9 482 aaPredicted RBP7.65□□□□□ -1.18
LINC00440-201ENST00000446579 RECKO95980 971 aa7.64□□□□□ -1.19
LINC00440-201ENST00000446579 POLR3DP05423 398 aaPredicted RBP7.64□□□□□ -1.19
LINC00440-201ENST00000446579 TAL1P17542 331 aaPredicted RBP7.64□□□□□ -1.19
LINC00440-201ENST00000446579 PEAR1Q5VY43 1037 aaPredicted RBP7.64□□□□□ -1.19
LINC00440-201ENST00000446579 ALKBH8Q96BT7 664 aaKnown RBP7.64□□□□□ -1.19
LINC00440-201ENST00000446579 DNAJC25Q9H1X3 360 aa7.64□□□□□ -1.19
LINC00440-201ENST00000446579 SOX13Q9UN79 622 aa7.64□□□□□ -1.19
LINC00440-201ENST00000446579 WDR64B1ANS9 1081 aa7.63□□□□□ -1.19
LINC00440-201ENST00000446579 GPR182O15218 404 aa7.63□□□□□ -1.19
LINC00440-201ENST00000446579 P4HBP07237 508 aaKnown RBP7.63□□□□□ -1.19
LINC00440-201ENST00000446579 RXRBP28702 533 aa7.63□□□□□ -1.19
LINC00440-201ENST00000446579 DSC3Q14574 896 aa7.63□□□□□ -1.19
LINC00440-201ENST00000446579 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.63□□□□□ -1.19
LINC00440-201ENST00000446579 NIF3L1Q9GZT8 377 aa7.63□□□□□ -1.19
LINC00440-201ENST00000446579 LATS2Q9NRM7 1088 aa7.63□□□□□ -1.19
LINC00440-201ENST00000446579 PRR19A6NJB7 356 aa7.62□□□□□ -1.19
LINC00440-201ENST00000446579 TXKP42681 527 aa7.62□□□□□ -1.19
LINC00440-201ENST00000446579 C19orf57Q0VDD7 668 aa7.62□□□□□ -1.19
LINC00440-201ENST00000446579 ORC1Q13415 861 aa7.62□□□□□ -1.19
LINC00440-201ENST00000446579 MRPL58Q14197 206 aaKnown RBP7.62□□□□□ -1.19
LINC00440-201ENST00000446579 HGSNATQ68CP4 663 aa7.62□□□□□ -1.19
LINC00440-201ENST00000446579 C12orf50Q8NA57 414 aaPredicted RBP7.62□□□□□ -1.19
LINC00440-201ENST00000446579 MFSD14AQ96MC6 490 aa7.62□□□□□ -1.19
LINC00440-201ENST00000446579 A0A1W2PP55 124 aa7.61□□□□□ -1.19
LINC00440-201ENST00000446579 LOC105371045A0A1W2PR82 267 aa7.61□□□□□ -1.19
LINC00440-201ENST00000446579 EIF1AYO14602 144 aaKnown RBP7.61□□□□□ -1.19
LINC00440-201ENST00000446579 WNT11O96014 354 aa7.61□□□□□ -1.19
LINC00440-201ENST00000446579 SPINK2P20155 84 aa7.61□□□□□ -1.19
LINC00440-201ENST00000446579 IKBKEQ14164 716 aa7.61□□□□□ -1.19
LINC00440-201ENST00000446579 KIAA0319Q5VV43 1072 aa7.61□□□□□ -1.19
LINC00440-201ENST00000446579 NUTM2GQ5VZR2 741 aa7.61□□□□□ -1.19
LINC00440-201ENST00000446579 USPL1Q5W0Q7 1092 aa7.61□□□□□ -1.19
LINC00440-201ENST00000446579 ASAP3Q8TDY4 903 aa7.61□□□□□ -1.19
LINC00440-201ENST00000446579 C8orf37Q96NL8 207 aa7.61□□□□□ -1.19
LINC00440-201ENST00000446579 USP26Q9BXU7 913 aa7.61□□□□□ -1.19
LINC00440-201ENST00000446579 BCL11AQ9H165 835 aa7.61□□□□□ -1.19
LINC00440-201ENST00000446579 HIF3AQ9Y2N7 669 aa7.61□□□□□ -1.19
LINC00440-201ENST00000446579 ADAMTS4O75173 837 aa7.6□□□□□ -1.19
LINC00440-201ENST00000446579 MAP4P27816 1152 aaKnown RBP7.6□□□□□ -1.19
LINC00440-201ENST00000446579 FGD1P98174 961 aa7.6□□□□□ -1.19
LINC00440-201ENST00000446579 VN1R5Q7Z5H4 357 aa7.6□□□□□ -1.19
LINC00440-201ENST00000446579 CCNJLQ8IV13 435 aa7.6□□□□□ -1.19
LINC00440-201ENST00000446579 FBXL6Q8N531 539 aa7.6□□□□□ -1.19
LINC00440-201ENST00000446579 GIMAP7Q8NHV1 300 aa7.6□□□□□ -1.19
LINC00440-201ENST00000446579 CSRNP1Q96S65 589 aa7.6□□□□□ -1.19
LINC00440-201ENST00000446579 LIN7BQ9HAP6 207 aa7.6□□□□□ -1.19
LINC00440-201ENST00000446579 BTBD11A6QL63 1104 aa7.59□□□□□ -1.19
LINC00440-201ENST00000446579 SOX1O00570 391 aaPredicted RBP7.59□□□□□ -1.19
LINC00440-201ENST00000446579 EIF4EBP3O60516 100 aaPredicted RBP7.59□□□□□ -1.19
LINC00440-201ENST00000446579 SGO2Q562F6 1265 aa7.59□□□□□ -1.19
LINC00440-201ENST00000446579 DTX1Q86Y01 620 aa7.59□□□□□ -1.19
LINC00440-201ENST00000446579 KRTAP19-1Q8IUB9 90 aa7.59□□□□□ -1.19
LINC00440-201ENST00000446579 CCDC74AQ96AQ1 378 aa7.59□□□□□ -1.19
LINC00440-201ENST00000446579 ATG3Q9NT62 314 aa7.59□□□□□ -1.19
LINC00440-201ENST00000446579 PRPF40AO75400 957 aaKnown RBP7.58□□□□□ -1.2
LINC00440-201ENST00000446579 PLCB3Q01970 1234 aa7.58□□□□□ -1.2
LINC00440-201ENST00000446579 TCF12Q99081 682 aa7.58□□□□□ -1.2
LINC00440-201ENST00000446579 EHD4Q9H223 541 aa7.58□□□□□ -1.2
LINC00440-201ENST00000446579 SOX17Q9H6I2 414 aaPredicted RBP7.58□□□□□ -1.2
LINC00440-201ENST00000446579 CYP4F12Q9HCS2 524 aa7.58□□□□□ -1.2
LINC00440-201ENST00000446579 NPHS2Q9NP85 383 aa7.58□□□□□ -1.2
LINC00440-201ENST00000446579 RNF114Q9Y508 228 aa7.58□□□□□ -1.2
LINC00440-201ENST00000446579 A0A096LPE4 126 aa7.57□□□□□ -1.2
LINC00440-201ENST00000446579 A0A1W2PPZ6 126 aa7.57□□□□□ -1.2
LINC00440-201ENST00000446579 MEGF11A6BM72 1044 aa7.57□□□□□ -1.2
LINC00440-201ENST00000446579 HOXA10P31260 410 aaPredicted RBP7.57□□□□□ -1.2
LINC00440-201ENST00000446579 USP11P51784 963 aa7.57□□□□□ -1.2
LINC00440-201ENST00000446579 NFKBIBQ15653 356 aa7.57□□□□□ -1.2
LINC00440-201ENST00000446579 OSBPL1AQ9BXW6 950 aa7.57□□□□□ -1.2
LINC00440-201ENST00000446579 PIM2Q9P1W9 311 aa7.57□□□□□ -1.2
LINC00440-201ENST00000446579 LEMD3Q9Y2U8 911 aa7.57□□□□□ -1.2
LINC00440-201ENST00000446579 METTL12A8MUP2 240 aa7.56□□□□□ -1.2
LINC00440-201ENST00000446579 ESRRAP11474 423 aaPredicted RBP7.56□□□□□ -1.2
LINC00440-201ENST00000446579 LDLRAD1Q5T700 205 aa7.56□□□□□ -1.2
LINC00440-201ENST00000446579 CLEC4MQ9H2X3 399 aaPredicted RBP7.56□□□□□ -1.2
LINC00440-201ENST00000446579 ANGEL1Q9UNK9 670 aaKnown RBP7.56□□□□□ -1.2
LINC00440-201ENST00000446579 TRAK1Q9UPV9 953 aa7.56□□□□□ -1.2
LINC00440-201ENST00000446579 LOC100289279A0A1B0GTE1 492 aa7.55□□□□□ -1.2
LINC00440-201ENST00000446579 GADD45BO75293 160 aaPredicted RBP7.55□□□□□ -1.2
LINC00440-201ENST00000446579 LDHBP07195 334 aaKnown RBP7.55□□□□□ -1.2
LINC00440-201ENST00000446579 DRD2P14416 443 aa7.55□□□□□ -1.2
LINC00440-201ENST00000446579 GRIA4P48058 902 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms