RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 MYSM1Q5VVJ2 828 aa16.06■□□□□ 0.16
VPS52-212ENST00000445902 TTLL5Q6EMB2 1281 aa16.06■□□□□ 0.16
VPS52-212ENST00000445902 SYKP43405 635 aa16.05■□□□□ 0.16
VPS52-212ENST00000445902 DHX8Q14562 1220 aaKnown RBP16.05■□□□□ 0.16
VPS52-212ENST00000445902 PACS2Q86VP3 889 aa16.05■□□□□ 0.16
VPS52-212ENST00000445902 LINS1Q8NG48 757 aa16.05■□□□□ 0.16
VPS52-212ENST00000445902 MRPL44Q9H9J2 332 aaKnown RBP16.05■□□□□ 0.16
VPS52-212ENST00000445902 ATP5JP18859 108 aa16.05■□□□□ 0.16
VPS52-212ENST00000445902 CHMP4BP1P59074 171 aa16.05■□□□□ 0.16
VPS52-212ENST00000445902 EXOSC10Q01780 885 aaKnown RBP16.05■□□□□ 0.16
VPS52-212ENST00000445902 TNNI3KQ59H18 835 aa16.05■□□□□ 0.16
VPS52-212ENST00000445902 AXDND1Q5T1B0 1012 aaPredicted RBP16.05■□□□□ 0.16
VPS52-212ENST00000445902 PNKPQ96T60 521 aa16.05■□□□□ 0.16
VPS52-212ENST00000445902 FPGT-TNNI3KV9GXZ4 949 aa16.05■□□□□ 0.16
VPS52-212ENST00000445902 TECPR2O15040 1411 aa16.05■□□□□ 0.16
VPS52-212ENST00000445902 CEMIPQ8WUJ3 1361 aa16.05■□□□□ 0.16
VPS52-212ENST00000445902 RHOXF2BP0C7M4 288 aa16.05■□□□□ 0.16
VPS52-212ENST00000445902 HAND2P61296 217 aa16.05■□□□□ 0.16
VPS52-212ENST00000445902 TAF7LQ5H9L4 462 aa16.05■□□□□ 0.16
VPS52-212ENST00000445902 RHOXF2Q9BQY4 288 aa16.05■□□□□ 0.16
VPS52-212ENST00000445902 CCDC151A5D8V7 595 aa16.04■□□□□ 0.16
VPS52-212ENST00000445902 GOLIM4O00461 696 aa16.04■□□□□ 0.16
VPS52-212ENST00000445902 HMGB1P09429 215 aaKnown RBP16.04■□□□□ 0.16
VPS52-212ENST00000445902 CDC27P30260 824 aa16.04■□□□□ 0.16
VPS52-212ENST00000445902 PDE4BQ07343 736 aa16.04■□□□□ 0.16
VPS52-212ENST00000445902 ANO1Q5XXA6 986 aa16.04■□□□□ 0.16
VPS52-212ENST00000445902 SLC26A8Q96RN1 970 aa16.04■□□□□ 0.16
VPS52-212ENST00000445902 POLR3EQ9NVU0 708 aa16.04■□□□□ 0.16
VPS52-212ENST00000445902 CLIC6Q96NY7 704 aa16.04■□□□□ 0.16
VPS52-212ENST00000445902 PLEKHG2Q9H7P9 1386 aa16.04■□□□□ 0.16
VPS52-212ENST00000445902 MAP2K7O14733 419 aa16.03■□□□□ 0.16
VPS52-212ENST00000445902 YEATS4O95619 227 aa16.03■□□□□ 0.16
VPS52-212ENST00000445902 IGKV5-2P06315 115 aa16.03■□□□□ 0.16
VPS52-212ENST00000445902 HOXB7P09629 217 aa16.03■□□□□ 0.16
VPS52-212ENST00000445902 MYL6BP14649 208 aa16.03■□□□□ 0.16
VPS52-212ENST00000445902 ICE2Q659A1 982 aa16.03■□□□□ 0.16
VPS52-212ENST00000445902 ZNF530Q6P9A1 599 aaPredicted RBP16.03■□□□□ 0.16
VPS52-212ENST00000445902 RIC3Q7Z5B4 369 aa16.03■□□□□ 0.16
VPS52-212ENST00000445902 CCDC102AQ96A19 550 aa16.03■□□□□ 0.16
VPS52-212ENST00000445902 SIRT1Q96EB6 747 aa16.03■□□□□ 0.16
VPS52-212ENST00000445902 ANKZF1Q9H8Y5 726 aa16.03■□□□□ 0.16
VPS52-212ENST00000445902 PSD3Q9NYI0 1048 aa16.03■□□□□ 0.16
VPS52-212ENST00000445902 HDAC5Q9UQL6 1122 aa16.03■□□□□ 0.16
VPS52-212ENST00000445902 FOXN1O15353 648 aa16.03■□□□□ 0.16
VPS52-212ENST00000445902 OLFM4Q6UX06 510 aa16.03■□□□□ 0.16
VPS52-212ENST00000445902 TRMT44Q8IYL2 757 aaKnown RBP16.03■□□□□ 0.16
VPS52-212ENST00000445902 GOLGA6L1Q8N7Z2 621 aa16.03■□□□□ 0.16
VPS52-212ENST00000445902 TC2NQ8N9U0 490 aa16.03■□□□□ 0.16
VPS52-212ENST00000445902 DRC1Q96MC2 740 aa16.03■□□□□ 0.16
VPS52-212ENST00000445902 AIFM3Q96NN9 605 aa16.03■□□□□ 0.16
VPS52-212ENST00000445902 ABCB6Q9NP58 842 aa16.03■□□□□ 0.16
VPS52-212ENST00000445902 PIK3C2AO00443 1686 aa16.03■□□□□ 0.16
VPS52-212ENST00000445902 NCAPD2Q15021 1401 aa16.02■□□□□ 0.16
VPS52-212ENST00000445902 TTC31Q49AM3 519 aaPredicted RBP16.02■□□□□ 0.16
VPS52-212ENST00000445902 BEND6Q5SZJ8 279 aaPredicted RBP16.02■□□□□ 0.16
VPS52-212ENST00000445902 JAKMIP3Q5VZ66 844 aa16.02■□□□□ 0.16
VPS52-212ENST00000445902 FCHSD1Q86WN1 690 aa16.02■□□□□ 0.16
VPS52-212ENST00000445902 KDM3BQ7LBC6 1761 aa16.02■□□□□ 0.16
VPS52-212ENST00000445902 SOWAHDA6NJG2 315 aa16.02■□□□□ 0.16
VPS52-212ENST00000445902 CMA1P23946 247 aa16.02■□□□□ 0.16
VPS52-212ENST00000445902 SPECC1Q5M775 1068 aa16.02■□□□□ 0.16
VPS52-212ENST00000445902 STK11IPQ8N1F8 1099 aa16.02■□□□□ 0.16
VPS52-212ENST00000445902 EIF3CLB5ME19 914 aaKnown RBP16.02■□□□□ 0.15
VPS52-212ENST00000445902 ABTB2Q8N961 1025 aa16.02■□□□□ 0.15
VPS52-212ENST00000445902 CPLX3Q8WVH0 158 aa16.02■□□□□ 0.15
VPS52-212ENST00000445902 NEUROD6Q96NK8 337 aa16.02■□□□□ 0.15
VPS52-212ENST00000445902 EIF3CQ99613 913 aaKnown RBP16.02■□□□□ 0.15
VPS52-212ENST00000445902 PIP4K2AP48426 406 aaPredicted RBP16.01■□□□□ 0.15
VPS52-212ENST00000445902 BRD3Q15059 726 aa16.01■□□□□ 0.15
VPS52-212ENST00000445902 ZNF827Q17R98 1081 aa16.01■□□□□ 0.15
VPS52-212ENST00000445902 AKAP2Q9Y2D5 859 aa16.01■□□□□ 0.15
VPS52-212ENST00000445902 A0A1B0GUL7 405 aa16.01■□□□□ 0.15
VPS52-212ENST00000445902 GOLGA8BA8MQT2 603 aa16.01■□□□□ 0.15
VPS52-212ENST00000445902 CUTAO60888 179 aa16.01■□□□□ 0.15
VPS52-212ENST00000445902 NOM1Q5C9Z4 860 aaKnown RBP16.01■□□□□ 0.15
VPS52-212ENST00000445902 SHC4Q6S5L8 630 aa16.01■□□□□ 0.15
VPS52-212ENST00000445902 HDXQ7Z353 690 aa16.01■□□□□ 0.15
VPS52-212ENST00000445902 FOXP4Q8IVH2 680 aaPredicted RBP16.01■□□□□ 0.15
VPS52-212ENST00000445902 LRRC59Q96AG4 307 aaKnown RBP16.01■□□□□ 0.15
VPS52-212ENST00000445902 ZNF274Q96GC6 653 aaPredicted RBP16.01■□□□□ 0.15
VPS52-212ENST00000445902 KLF18A0A0U1RQI7 1052 aa16■□□□□ 0.15
VPS52-212ENST00000445902 CPLX1O14810 134 aa16■□□□□ 0.15
VPS52-212ENST00000445902 IVLP07476 585 aa16■□□□□ 0.15
VPS52-212ENST00000445902 HSPD1P10809 573 aaKnown RBP16■□□□□ 0.15
VPS52-212ENST00000445902 SRGAP1Q7Z6B7 1085 aa16■□□□□ 0.15
VPS52-212ENST00000445902 MYD88Q99836 296 aa16■□□□□ 0.15
VPS52-212ENST00000445902 AGXT2Q9BYV1 514 aa16■□□□□ 0.15
VPS52-212ENST00000445902 TUBE1Q9UJT0 475 aa16■□□□□ 0.15
VPS52-212ENST00000445902 PCDHA5Q9Y5H7 936 aa16■□□□□ 0.15
VPS52-212ENST00000445902 STX10O60499 249 aa16■□□□□ 0.15
VPS52-212ENST00000445902 BMP6P22004 513 aa16■□□□□ 0.15
VPS52-212ENST00000445902 SART3Q15020 963 aaKnown RBP16■□□□□ 0.15
VPS52-212ENST00000445902 LONRF3Q496Y0 759 aa16■□□□□ 0.15
VPS52-212ENST00000445902 METTL16Q86W50 562 aaKnown RBP16■□□□□ 0.15
VPS52-212ENST00000445902 IQUBQ8NA54 791 aa16■□□□□ 0.15
VPS52-212ENST00000445902 HAUS7Q99871 368 aa16■□□□□ 0.15
VPS52-212ENST00000445902 JRKLQ9Y4A0 524 aa16■□□□□ 0.15
VPS52-212ENST00000445902 LOC102724159A0A0B4J2E5 919 aa15.99■□□□□ 0.15
VPS52-212ENST00000445902 GOLGA6L9A6NEM1 432 aa15.99■□□□□ 0.15
VPS52-212ENST00000445902 PWP2Q15269 919 aaKnown RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms