RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 CEP44Q9C0F1 390 aa7.59□□□□□ -1.19
HMGB3P6-201ENST00000444896 NRSN2Q9GZP1 204 aa7.59□□□□□ -1.19
HMGB3P6-201ENST00000444896 SRA1Q9HD15 236 aaKnown RBP7.59□□□□□ -1.19
HMGB3P6-201ENST00000444896 SCAMP3O14828 347 aaKnown RBP7.58□□□□□ -1.2
HMGB3P6-201ENST00000444896 ADAM11O75078 769 aa7.58□□□□□ -1.2
HMGB3P6-201ENST00000444896 APBA3O96018 575 aa7.58□□□□□ -1.2
HMGB3P6-201ENST00000444896 BMP6P22004 513 aa7.58□□□□□ -1.2
HMGB3P6-201ENST00000444896 ARL4DP49703 201 aa7.58□□□□□ -1.2
HMGB3P6-201ENST00000444896 GSTM4Q03013 218 aa7.58□□□□□ -1.2
HMGB3P6-201ENST00000444896 SUZ12Q15022 739 aaKnown RBP7.58□□□□□ -1.2
HMGB3P6-201ENST00000444896 FOXD4L6Q3SYB3 417 aaPredicted RBP7.58□□□□□ -1.2
HMGB3P6-201ENST00000444896 FOXD4L3Q6VB84 417 aaPredicted RBP7.58□□□□□ -1.2
HMGB3P6-201ENST00000444896 METTL16Q86W50 562 aaKnown RBP7.58□□□□□ -1.2
HMGB3P6-201ENST00000444896 NOC4LQ9BVI4 516 aaKnown RBP7.58□□□□□ -1.2
HMGB3P6-201ENST00000444896 ECEL1O95672 775 aa7.57□□□□□ -1.2
HMGB3P6-201ENST00000444896 HDLBPQ00341 1268 aaKnown RBP7.57□□□□□ -1.2
HMGB3P6-201ENST00000444896 CCDC85BQ15834 202 aaPredicted RBP7.57□□□□□ -1.2
HMGB3P6-201ENST00000444896 RASIP1Q5U651 963 aa7.57□□□□□ -1.2
HMGB3P6-201ENST00000444896 METTL5Q9NRN9 209 aaKnown RBP7.57□□□□□ -1.2
HMGB3P6-201ENST00000444896 CTSBP07858 339 aa7.56□□□□□ -1.2
HMGB3P6-201ENST00000444896 CD68P34810 354 aaPredicted RBP7.56□□□□□ -1.2
HMGB3P6-201ENST00000444896 PPP2R3AQ06190 1150 aa7.56□□□□□ -1.2
HMGB3P6-201ENST00000444896 GRIK4Q16099 956 aa7.56□□□□□ -1.2
HMGB3P6-201ENST00000444896 ERMP1Q7Z2K6 904 aa7.56□□□□□ -1.2
HMGB3P6-201ENST00000444896 PDZD3Q86UT5 571 aa7.56□□□□□ -1.2
HMGB3P6-201ENST00000444896 COPRSQ9NQ92 184 aa7.56□□□□□ -1.2
HMGB3P6-201ENST00000444896 ELNP15502 786 aa7.55□□□□□ -1.2
HMGB3P6-201ENST00000444896 SELPP16109 830 aa7.55□□□□□ -1.2
HMGB3P6-201ENST00000444896 NME2P22392 152 aa7.55□□□□□ -1.2
HMGB3P6-201ENST00000444896 ARNTP27540 789 aa7.55□□□□□ -1.2
HMGB3P6-201ENST00000444896 ZNF76P36508 570 aa7.55□□□□□ -1.2
HMGB3P6-201ENST00000444896 C9orf131Q5VYM1 1079 aa7.55□□□□□ -1.2
HMGB3P6-201ENST00000444896 SULF2Q8IWU5 870 aa7.55□□□□□ -1.2
HMGB3P6-201ENST00000444896 GRIN3AQ8TCU5 1115 aa7.55□□□□□ -1.2
HMGB3P6-201ENST00000444896 RNF34Q969K3 372 aa7.55□□□□□ -1.2
HMGB3P6-201ENST00000444896 DCAF5Q96JK2 942 aa7.55□□□□□ -1.2
HMGB3P6-201ENST00000444896 RSRP1Q9BUV0 290 aa7.55□□□□□ -1.2
HMGB3P6-201ENST00000444896 F6X3S4 739 aa7.54□□□□□ -1.2
HMGB3P6-201ENST00000444896 WISP1O95388 367 aa7.54□□□□□ -1.2
HMGB3P6-201ENST00000444896 DLGAP3O95886 979 aa7.54□□□□□ -1.2
HMGB3P6-201ENST00000444896 SPATA31C1P0DKV0 1188 aa7.54□□□□□ -1.2
HMGB3P6-201ENST00000444896 TCF3P15923 654 aa7.54□□□□□ -1.2
HMGB3P6-201ENST00000444896 LIG3P49916 1009 aa7.54□□□□□ -1.2
HMGB3P6-201ENST00000444896 NLRP12P59046 1061 aa7.54□□□□□ -1.2
HMGB3P6-201ENST00000444896 MAP3K11Q16584 847 aa7.54□□□□□ -1.2
HMGB3P6-201ENST00000444896 PCNX4Q63HM2 1172 aa7.54□□□□□ -1.2
HMGB3P6-201ENST00000444896 SHISA2Q6UWI4 295 aa7.54□□□□□ -1.2
HMGB3P6-201ENST00000444896 NACC1Q96RE7 527 aa7.54□□□□□ -1.2
HMGB3P6-201ENST00000444896 MAOBP27338 520 aa7.53□□□□□ -1.2
HMGB3P6-201ENST00000444896 ZNF252P-AS1Q0IIN9 211 aa7.53□□□□□ -1.2
HMGB3P6-201ENST00000444896 AP3B2Q13367 1082 aa7.53□□□□□ -1.2
HMGB3P6-201ENST00000444896 POU4F3Q15319 338 aa7.53□□□□□ -1.2
HMGB3P6-201ENST00000444896 TTBK2Q6IQ55 1244 aa7.53□□□□□ -1.2
HMGB3P6-201ENST00000444896 GPAT2Q6NUI2 795 aa7.53□□□□□ -1.2
HMGB3P6-201ENST00000444896 IGF2-ASQ6U949 168 aa7.53□□□□□ -1.2
HMGB3P6-201ENST00000444896 MPRIPQ6WCQ1 1025 aa7.53□□□□□ -1.2
HMGB3P6-201ENST00000444896 HS2ST1Q7LGA3 356 aa7.53□□□□□ -1.2
HMGB3P6-201ENST00000444896 DDX54Q8TDD1 881 aaKnown RBP7.53□□□□□ -1.2
HMGB3P6-201ENST00000444896 UBASH3BQ8TF42 649 aa7.53□□□□□ -1.2
HMGB3P6-201ENST00000444896 GGT7Q9UJ14 662 aa7.53□□□□□ -1.2
HMGB3P6-201ENST00000444896 TLR6Q9Y2C9 796 aa7.53□□□□□ -1.2
HMGB3P6-201ENST00000444896 LOC100289279A0A1B0GTE1 492 aa7.52□□□□□ -1.21
HMGB3P6-201ENST00000444896 CYP11A1P05108 521 aa7.52□□□□□ -1.21
HMGB3P6-201ENST00000444896 GSTP1P09211 210 aaKnown RBP7.52□□□□□ -1.21
HMGB3P6-201ENST00000444896 GSK3AP49840 483 aa7.52□□□□□ -1.21
HMGB3P6-201ENST00000444896 AGMOQ6ZNB7 445 aa7.52□□□□□ -1.21
HMGB3P6-201ENST00000444896 PHC3Q8NDX5 983 aa7.52□□□□□ -1.21
HMGB3P6-201ENST00000444896 DCAF11Q8TEB1 546 aa7.52□□□□□ -1.21
HMGB3P6-201ENST00000444896 KBTBD4Q9NVX7 518 aa7.52□□□□□ -1.21
HMGB3P6-201ENST00000444896 CACNA2D2Q9NY47 1150 aa7.52□□□□□ -1.21
HMGB3P6-201ENST00000444896 EIF4EBP3O60516 100 aaPredicted RBP7.51□□□□□ -1.21
HMGB3P6-201ENST00000444896 TFE3P19532 575 aaPredicted RBP7.51□□□□□ -1.21
HMGB3P6-201ENST00000444896 RPS26P62854 115 aaKnown RBP7.51□□□□□ -1.21
HMGB3P6-201ENST00000444896 RACK1P63244 317 aaKnown RBP7.51□□□□□ -1.21
HMGB3P6-201ENST00000444896 RAD51AP2Q09MP3 1159 aa7.51□□□□□ -1.21
HMGB3P6-201ENST00000444896 ZNF394Q53GI3 561 aa7.51□□□□□ -1.21
HMGB3P6-201ENST00000444896 KIAA1211Q6ZU35 1233 aa7.51□□□□□ -1.21
HMGB3P6-201ENST00000444896 RELL1Q8IUW5 271 aa7.51□□□□□ -1.21
HMGB3P6-201ENST00000444896 LENG1Q96BZ8 264 aaPredicted RBP7.51□□□□□ -1.21
HMGB3P6-201ENST00000444896 TMEM74Q96NL1 305 aa7.51□□□□□ -1.21
HMGB3P6-201ENST00000444896 USP26Q9BXU7 913 aa7.51□□□□□ -1.21
HMGB3P6-201ENST00000444896 EMILIN2Q9BXX0 1053 aa7.51□□□□□ -1.21
HMGB3P6-201ENST00000444896 ZC3H12CQ9C0D7 883 aaKnown RBP7.51□□□□□ -1.21
HMGB3P6-201ENST00000444896 USP21Q9UK80 565 aa7.51□□□□□ -1.21
HMGB3P6-201ENST00000444896 CYP8B1Q9UNU6 501 aa7.51□□□□□ -1.21
HMGB3P6-201ENST00000444896 PCDHB5Q9Y5E4 795 aa7.51□□□□□ -1.21
HMGB3P6-201ENST00000444896 KRBA1A5PL33 1030 aa7.5□□□□□ -1.21
HMGB3P6-201ENST00000444896 MINDY4BA8MYZ0 360 aa7.5□□□□□ -1.21
HMGB3P6-201ENST00000444896 RLBP1P12271 317 aa7.5□□□□□ -1.21
HMGB3P6-201ENST00000444896 DUOXA2Q1HG44 320 aa7.5□□□□□ -1.21
HMGB3P6-201ENST00000444896 NT5DC4Q86YG4 428 aa7.5□□□□□ -1.21
HMGB3P6-201ENST00000444896 TMEM130Q8N3G9 435 aa7.5□□□□□ -1.21
HMGB3P6-201ENST00000444896 WDR89Q96FK6 387 aaPredicted RBP7.5□□□□□ -1.21
HMGB3P6-201ENST00000444896 RHOVQ96L33 236 aa7.5□□□□□ -1.21
HMGB3P6-201ENST00000444896 CORO1BQ9BR76 489 aa7.5□□□□□ -1.21
HMGB3P6-201ENST00000444896 CCDC86Q9H6F5 360 aaKnown RBP7.5□□□□□ -1.21
HMGB3P6-201ENST00000444896 CBX8Q9HC52 389 aa7.5□□□□□ -1.21
HMGB3P6-201ENST00000444896 DDX41Q9UJV9 622 aaKnown RBP7.5□□□□□ -1.21
HMGB3P6-201ENST00000444896 SAMM50Q9Y512 469 aa7.5□□□□□ -1.21
HMGB3P6-201ENST00000444896 ZNF862O60290 1169 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms