RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 NBPF9Q3BBW0 867 aa13.26□□□□□ -0.29
HDAC6-211ENST00000443563 ANGEL2Q5VTE6 544 aaKnown RBP13.26□□□□□ -0.29
HDAC6-211ENST00000443563 APOBEC3FQ8IUX4 373 aaKnown RBP13.26□□□□□ -0.29
HDAC6-211ENST00000443563 SLF2Q8IX21 1173 aa13.26□□□□□ -0.29
HDAC6-211ENST00000443563 EXOC6Q8TAG9 804 aa13.26□□□□□ -0.29
HDAC6-211ENST00000443563 PASKQ96RG2 1323 aa13.26□□□□□ -0.29
HDAC6-211ENST00000443563 RWDD1Q9H446 243 aaPredicted RBP13.26□□□□□ -0.29
HDAC6-211ENST00000443563 HMG20BQ9P0W2 317 aa13.26□□□□□ -0.29
HDAC6-211ENST00000443563 ZBTB47Q9UFB7 747 aaPredicted RBP13.26□□□□□ -0.29
HDAC6-211ENST00000443563 AKAP11Q9UKA4 1901 aa13.25□□□□□ -0.29
HDAC6-211ENST00000443563 SPDYE2BA6NHP3 402 aa13.25□□□□□ -0.29
HDAC6-211ENST00000443563 SPDYE6P0CI01 402 aa13.25□□□□□ -0.29
HDAC6-211ENST00000443563 MCAMP43121 646 aa13.25□□□□□ -0.29
HDAC6-211ENST00000443563 CRKP46108 304 aa13.25□□□□□ -0.29
HDAC6-211ENST00000443563 HHIPL2Q6UWX4 724 aa13.25□□□□□ -0.29
HDAC6-211ENST00000443563 KRT26Q7Z3Y9 468 aa13.25□□□□□ -0.29
HDAC6-211ENST00000443563 GCC1Q96CN9 775 aa13.25□□□□□ -0.29
HDAC6-211ENST00000443563 ZBED3Q96IU2 234 aaPredicted RBP13.25□□□□□ -0.29
HDAC6-211ENST00000443563 ABCF2Q9UG63 623 aa13.25□□□□□ -0.29
HDAC6-211ENST00000443563 MYH2Q9UKX2 1941 aa13.24□□□□□ -0.29
HDAC6-211ENST00000443563 ERICH6Q7L0X2 663 aa13.24□□□□□ -0.29
HDAC6-211ENST00000443563 USP48Q86UV5 1035 aa13.24□□□□□ -0.29
HDAC6-211ENST00000443563 DZIP1Q86YF9 867 aaKnown RBP13.24□□□□□ -0.29
HDAC6-211ENST00000443563 ZDHHC15Q96MV8 337 aa13.24□□□□□ -0.29
HDAC6-211ENST00000443563 GLIS2Q9BZE0 524 aaPredicted RBP13.24□□□□□ -0.29
HDAC6-211ENST00000443563 TLR7Q9NYK1 1049 aaKnown RBP13.24□□□□□ -0.29
HDAC6-211ENST00000443563 MAST2Q6P0Q8 1798 aa13.23□□□□□ -0.29
HDAC6-211ENST00000443563 TMEM88BA6NKF7 163 aa13.23□□□□□ -0.29
HDAC6-211ENST00000443563 PRDX5P30044 214 aa13.23□□□□□ -0.29
HDAC6-211ENST00000443563 GSTO1P78417 241 aa13.23□□□□□ -0.29
HDAC6-211ENST00000443563 TNFAIP1Q13829 316 aa13.23□□□□□ -0.29
HDAC6-211ENST00000443563 GRIK5Q16478 980 aa13.23□□□□□ -0.29
HDAC6-211ENST00000443563 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.23□□□□□ -0.29
HDAC6-211ENST00000443563 GPATCH3Q96I76 525 aa13.23□□□□□ -0.29
HDAC6-211ENST00000443563 PRMT6Q96LA8 375 aaPredicted RBP13.23□□□□□ -0.29
HDAC6-211ENST00000443563 CREBZFQ9NS37 354 aa13.23□□□□□ -0.29
HDAC6-211ENST00000443563 ASTN2O75129 1339 aaPredicted RBP13.22□□□□□ -0.29
HDAC6-211ENST00000443563 CENPBP07199 599 aaPredicted RBP13.22□□□□□ -0.29
HDAC6-211ENST00000443563 LDHCP07864 332 aa13.22□□□□□ -0.29
HDAC6-211ENST00000443563 TNNI2P48788 182 aa13.22□□□□□ -0.29
HDAC6-211ENST00000443563 TMED8Q6PL24 325 aaPredicted RBP13.22□□□□□ -0.29
HDAC6-211ENST00000443563 BCL11AQ9H165 835 aa13.22□□□□□ -0.29
HDAC6-211ENST00000443563 TMOD2Q9NZR1 351 aa13.22□□□□□ -0.29
HDAC6-211ENST00000443563 LRP2BPQ9P2M1 347 aa13.22□□□□□ -0.29
HDAC6-211ENST00000443563 PPP2R3BQ9Y5P8 575 aa13.22□□□□□ -0.29
HDAC6-211ENST00000443563 ADM5C9JUS6 153 aa13.21□□□□□ -0.29
HDAC6-211ENST00000443563 TRAF5O00463 557 aa13.21□□□□□ -0.29
HDAC6-211ENST00000443563 SMARCA5O60264 1052 aaPredicted RBP13.21□□□□□ -0.29
HDAC6-211ENST00000443563 ZAP70P43403 619 aa13.21□□□□□ -0.29
HDAC6-211ENST00000443563 IRX6P78412 446 aaPredicted RBP13.21□□□□□ -0.29
HDAC6-211ENST00000443563 TTF1Q15361 905 aaPredicted RBP13.21□□□□□ -0.29
HDAC6-211ENST00000443563 SPDYE2Q495Y8 402 aa13.21□□□□□ -0.29
HDAC6-211ENST00000443563 PI16Q6UXB8 463 aa13.21□□□□□ -0.29
HDAC6-211ENST00000443563 FAM163AQ96GL9 167 aaPredicted RBP13.21□□□□□ -0.29
HDAC6-211ENST00000443563 TDRD3Q9H7E2 651 aaKnown RBP13.21□□□□□ -0.29
HDAC6-211ENST00000443563 VEZTQ9HBM0 779 aa13.21□□□□□ -0.29
HDAC6-211ENST00000443563 SNRKQ9NRH2 765 aa13.21□□□□□ -0.29
HDAC6-211ENST00000443563 RAI14Q9P0K7 980 aa13.21□□□□□ -0.29
HDAC6-211ENST00000443563 ZNF70Q9UC06 446 aaPredicted RBP13.21□□□□□ -0.29
HDAC6-211ENST00000443563 DOCK2Q92608 1830 aa13.2□□□□□ -0.3
HDAC6-211ENST00000443563 CLRN2A0PK11 232 aa13.2□□□□□ -0.3
HDAC6-211ENST00000443563 CELF2O95319 508 aaKnown RBP13.2□□□□□ -0.3
HDAC6-211ENST00000443563 CYP2E1P05181 493 aaPredicted RBP13.2□□□□□ -0.3
HDAC6-211ENST00000443563 ATP5JP18859 108 aa13.2□□□□□ -0.3
HDAC6-211ENST00000443563 NF2P35240 595 aa13.2□□□□□ -0.3
HDAC6-211ENST00000443563 MECOMQ03112 1051 aa13.2□□□□□ -0.3
HDAC6-211ENST00000443563 FKBP1CQ5VVH2 108 aa13.2□□□□□ -0.3
HDAC6-211ENST00000443563 CDCA5Q96FF9 252 aa13.2□□□□□ -0.3
HDAC6-211ENST00000443563 NOL10Q9BSC4 688 aaKnown RBP13.2□□□□□ -0.3
HDAC6-211ENST00000443563 DAGLAQ9Y4D2 1042 aa13.2□□□□□ -0.3
HDAC6-211ENST00000443563 PCDHAC2Q9Y5I4 1007 aa13.2□□□□□ -0.3
HDAC6-211ENST00000443563 MROH7-TTC4A0A0A0MT08 1334 aa13.19□□□□□ -0.3
HDAC6-211ENST00000443563 MYO5AQ9Y4I1 1855 aaKnown RBP13.19□□□□□ -0.3
HDAC6-211ENST00000443563 MAP4K4O95819 1239 aaPredicted RBP13.19□□□□□ -0.3
HDAC6-211ENST00000443563 DIXDC1Q155Q3 683 aa13.19□□□□□ -0.3
HDAC6-211ENST00000443563 ANKRD45Q5TZF3 282 aa13.19□□□□□ -0.3
HDAC6-211ENST00000443563 APOBEC3HQ6NTF7 200 aaKnown RBP13.19□□□□□ -0.3
HDAC6-211ENST00000443563 TBC1D9Q6ZT07 1266 aa13.19□□□□□ -0.3
HDAC6-211ENST00000443563 C2orf69Q8N8R5 385 aa13.19□□□□□ -0.3
HDAC6-211ENST00000443563 NSUN4Q96CB9 384 aaKnown RBP13.19□□□□□ -0.3
HDAC6-211ENST00000443563 DEFB129Q9H1M3 183 aa13.19□□□□□ -0.3
HDAC6-211ENST00000443563 ZNF408Q9H9D4 720 aa13.19□□□□□ -0.3
HDAC6-211ENST00000443563 ECHDC1Q9NTX5 307 aa13.19□□□□□ -0.3
HDAC6-211ENST00000443563 GAKO14976 1311 aa13.18□□□□□ -0.3
HDAC6-211ENST00000443563 FKBP1BP68106 108 aa13.18□□□□□ -0.3
HDAC6-211ENST00000443563 MAP3K12Q12852 859 aa13.18□□□□□ -0.3
HDAC6-211ENST00000443563 SUPT20HL1Q3ZLR7 823 aa13.18□□□□□ -0.3
HDAC6-211ENST00000443563 CST9Q5W186 159 aa13.18□□□□□ -0.3
HDAC6-211ENST00000443563 NAA16Q6N069 864 aaPredicted RBP13.18□□□□□ -0.3
HDAC6-211ENST00000443563 FAM83AQ86UY5 434 aa13.18□□□□□ -0.3
HDAC6-211ENST00000443563 ABT1Q9ULW3 272 aaKnown RBP13.18□□□□□ -0.3
HDAC6-211ENST00000443563 PAPPA2Q9BXP8 1791 aa13.17□□□□□ -0.3
HDAC6-211ENST00000443563 TTC41PQ6P2S7 1318 aa13.17□□□□□ -0.3
HDAC6-211ENST00000443563 ERC2O15083 957 aa13.17□□□□□ -0.3
HDAC6-211ENST00000443563 IDH1O75874 414 aaKnown RBP13.17□□□□□ -0.3
HDAC6-211ENST00000443563 BAG3O95817 575 aa13.17□□□□□ -0.3
HDAC6-211ENST00000443563 FMR1Q06787 632 aaKnown RBP eCLIP13.17□□□□□ -0.3
HDAC6-211ENST00000443563 RASA3Q14644 834 aa13.17□□□□□ -0.3
HDAC6-211ENST00000443563 CERS3Q8IU89 383 aa13.17□□□□□ -0.3
HDAC6-211ENST00000443563 SMC5Q8IY18 1101 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms