RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 KIF1BPQ96EK5 621 aa8.81□□□□□ -1
CDC42BPA-208ENST00000442054 FEZ1Q99689 392 aa8.81□□□□□ -1
CDC42BPA-208ENST00000442054 GZF1Q9H116 711 aaPredicted RBP8.81□□□□□ -1
CDC42BPA-208ENST00000442054 MPHOSPH10O00566 681 aaKnown RBP8.8□□□□□ -1
CDC42BPA-208ENST00000442054 RPS12P25398 132 aaKnown RBP8.8□□□□□ -1
CDC42BPA-208ENST00000442054 APLP1P51693 650 aa8.8□□□□□ -1
CDC42BPA-208ENST00000442054 TFCP2Q12800 502 aa8.8□□□□□ -1
CDC42BPA-208ENST00000442054 NAA16Q6N069 864 aaPredicted RBP8.8□□□□□ -1
CDC42BPA-208ENST00000442054 TAF1DQ9H5J8 278 aaPredicted RBP8.8□□□□□ -1
CDC42BPA-208ENST00000442054 BIN2Q9UBW5 565 aaPredicted RBP8.8□□□□□ -1
CDC42BPA-208ENST00000442054 POLLQ9UGP5 575 aa8.8□□□□□ -1
CDC42BPA-208ENST00000442054 MYH15Q9Y2K3 1946 aa8.8□□□□□ -1
CDC42BPA-208ENST00000442054 PNMA6EA0A0J9YXQ4 647 aa8.8□□□□□ -1
CDC42BPA-208ENST00000442054 A0A1B0GUL7 405 aa8.8□□□□□ -1
CDC42BPA-208ENST00000442054 HLA-DOAP06340 250 aa8.8□□□□□ -1
CDC42BPA-208ENST00000442054 IKQ13123 557 aaPredicted RBP8.8□□□□□ -1
CDC42BPA-208ENST00000442054 GLIS2Q9BZE0 524 aaPredicted RBP8.8□□□□□ -1
CDC42BPA-208ENST00000442054 RSBN1LQ6PCB5 846 aaPredicted RBP8.79□□□□□ -1
CDC42BPA-208ENST00000442054 LRRCC1Q9C099 1032 aa8.79□□□□□ -1
CDC42BPA-208ENST00000442054 SCAF8Q9UPN6 1271 aaKnown RBP8.79□□□□□ -1
CDC42BPA-208ENST00000442054 CFAP100Q494V2 611 aa8.79□□□□□ -1
CDC42BPA-208ENST00000442054 CASC1Q6TDU7 716 aa8.79□□□□□ -1
CDC42BPA-208ENST00000442054 FSD1Q9BTV5 496 aa8.79□□□□□ -1
CDC42BPA-208ENST00000442054 BOLA2Q9H3K6 86 aa8.79□□□□□ -1
CDC42BPA-208ENST00000442054 PALD1Q9ULE6 856 aa8.79□□□□□ -1
CDC42BPA-208ENST00000442054 NAP1L2Q9ULW6 460 aaPredicted RBP8.79□□□□□ -1
CDC42BPA-208ENST00000442054 MTMR7Q9Y216 660 aa8.79□□□□□ -1
CDC42BPA-208ENST00000442054 AOX1Q06278 1338 aa8.79□□□□□ -1
CDC42BPA-208ENST00000442054 CICQ96RK0 1608 aaPredicted RBP8.79□□□□□ -1
CDC42BPA-208ENST00000442054 PRAMEF18Q5VWM3 479 aa8.79□□□□□ -1
CDC42BPA-208ENST00000442054 KIAA1211Q6ZU35 1233 aa8.79□□□□□ -1
CDC42BPA-208ENST00000442054 USP50Q70EL3 339 aaPredicted RBP8.79□□□□□ -1
CDC42BPA-208ENST00000442054 PICK1Q9NRD5 415 aa8.79□□□□□ -1
CDC42BPA-208ENST00000442054 RPAP1Q9BWH6 1393 aaPredicted RBP8.79□□□□□ -1
CDC42BPA-208ENST00000442054 EPB41L2O43491 1005 aaKnown RBP8.78□□□□□ -1
CDC42BPA-208ENST00000442054 PTMSP20962 102 aa8.78□□□□□ -1
CDC42BPA-208ENST00000442054 CRY2Q49AN0 593 aa8.78□□□□□ -1
CDC42BPA-208ENST00000442054 DCAF15Q66K64 600 aa8.78□□□□□ -1
CDC42BPA-208ENST00000442054 HSPA6P17066 643 aa8.78□□□□□ -1
CDC42BPA-208ENST00000442054 CYP7A1P22680 504 aa8.78□□□□□ -1
CDC42BPA-208ENST00000442054 IREB2P48200 963 aaKnown RBP8.78□□□□□ -1
CDC42BPA-208ENST00000442054 ATP8B2P98198 1209 aa8.78□□□□□ -1
CDC42BPA-208ENST00000442054 SCARF1Q14162 830 aa8.78□□□□□ -1
CDC42BPA-208ENST00000442054 EPHA10Q5JZY3 1008 aa8.78□□□□□ -1
CDC42BPA-208ENST00000442054 STRIP1Q5VSL9 837 aa8.78□□□□□ -1
CDC42BPA-208ENST00000442054 ZSCAN25Q6NSZ9 544 aa8.78□□□□□ -1
CDC42BPA-208ENST00000442054 PI4K2BQ8TCG2 481 aa8.78□□□□□ -1
CDC42BPA-208ENST00000442054 VPS33BQ9H267 617 aa8.78□□□□□ -1
CDC42BPA-208ENST00000442054 USP40Q9NVE5 1235 aa8.78□□□□□ -1
CDC42BPA-208ENST00000442054 TMEM88BA6NKF7 163 aa8.78□□□□□ -1
CDC42BPA-208ENST00000442054 BRD1O95696 1058 aa8.78□□□□□ -1
CDC42BPA-208ENST00000442054 KCNA3P22001 575 aa8.78□□□□□ -1
CDC42BPA-208ENST00000442054 GBP4Q96PP9 640 aa8.78□□□□□ -1
CDC42BPA-208ENST00000442054 ESYT1Q9BSJ8 1104 aa8.78□□□□□ -1
CDC42BPA-208ENST00000442054 CABP5Q9NP86 173 aa8.78□□□□□ -1
CDC42BPA-208ENST00000442054 GPRC5DQ9NZD1 345 aa8.78□□□□□ -1
CDC42BPA-208ENST00000442054 ZC3H4Q9UPT8 1303 aaKnown RBP8.78□□□□□ -1
CDC42BPA-208ENST00000442054 HTRA3P83110 453 aa8.77□□□□□ -1
CDC42BPA-208ENST00000442054 APOBEC3FQ8IUX4 373 aaKnown RBP8.77□□□□□ -1
CDC42BPA-208ENST00000442054 SSH3Q8TE77 659 aa8.77□□□□□ -1
CDC42BPA-208ENST00000442054 XAGE2Q96GT9 111 aa8.77□□□□□ -1
CDC42BPA-208ENST00000442054 MXD3Q9BW11 206 aa8.77□□□□□ -1
CDC42BPA-208ENST00000442054 ADCY9O60503 1353 aa8.77□□□□□ -1.01
CDC42BPA-208ENST00000442054 ZNF541Q9H0D2 1346 aa8.77□□□□□ -1.01
CDC42BPA-208ENST00000442054 CHMLP26374 656 aa8.77□□□□□ -1.01
CDC42BPA-208ENST00000442054 ZSCAN23Q3MJ62 389 aa8.77□□□□□ -1.01
CDC42BPA-208ENST00000442054 AGBL3Q8NEM8 1001 aa8.77□□□□□ -1.01
CDC42BPA-208ENST00000442054 RBM46Q8TBY0 533 aaKnown RBP8.77□□□□□ -1.01
CDC42BPA-208ENST00000442054 CHAMP1Q96JM3 812 aa8.77□□□□□ -1.01
CDC42BPA-208ENST00000442054 TDRD3Q9H7E2 651 aaKnown RBP8.77□□□□□ -1.01
CDC42BPA-208ENST00000442054 GBA2Q9HCG7 927 aaPredicted RBP8.77□□□□□ -1.01
CDC42BPA-208ENST00000442054 MYOZ2Q9NPC6 264 aa8.77□□□□□ -1.01
CDC42BPA-208ENST00000442054 C4BP0C0L5 1744 aa8.77□□□□□ -1.01
CDC42BPA-208ENST00000442054 LAMA4Q16363 1823 aa8.77□□□□□ -1.01
CDC42BPA-208ENST00000442054 ESPNB1AK53 854 aa8.77□□□□□ -1.01
CDC42BPA-208ENST00000442054 TEX11Q8IYF3 940 aa8.77□□□□□ -1.01
CDC42BPA-208ENST00000442054 KCNB2Q92953 911 aa8.77□□□□□ -1.01
CDC42BPA-208ENST00000442054 TTC14Q96N46 770 aa8.77□□□□□ -1.01
CDC42BPA-208ENST00000442054 DIAPH3Q9NSV4 1193 aa8.77□□□□□ -1.01
CDC42BPA-208ENST00000442054 PKD1L3Q7Z443 1732 aa8.77□□□□□ -1.01
CDC42BPA-208ENST00000442054 NHSQ6T4R5 1651 aa8.77□□□□□ -1.01
CDC42BPA-208ENST00000442054 C10orf71Q711Q0 1435 aa8.77□□□□□ -1.01
CDC42BPA-208ENST00000442054 GOLIM4O00461 696 aa8.76□□□□□ -1.01
CDC42BPA-208ENST00000442054 PLCG2P16885 1265 aa8.76□□□□□ -1.01
CDC42BPA-208ENST00000442054 FSTL1Q12841 308 aa8.76□□□□□ -1.01
CDC42BPA-208ENST00000442054 RBSNQ9H1K0 784 aa8.76□□□□□ -1.01
CDC42BPA-208ENST00000442054 SLC3A2P08195 630 aaKnown RBP8.76□□□□□ -1.01
CDC42BPA-208ENST00000442054 NACAP1Q9BZK3 213 aa8.76□□□□□ -1.01
CDC42BPA-208ENST00000442054 NUP188Q5SRE5 1749 aa8.76□□□□□ -1.01
CDC42BPA-208ENST00000442054 DHX16O60231 1041 aaKnown RBP8.76□□□□□ -1.01
CDC42BPA-208ENST00000442054 TDO2P48775 406 aa8.76□□□□□ -1.01
CDC42BPA-208ENST00000442054 ANAPC15P60006 121 aa8.76□□□□□ -1.01
CDC42BPA-208ENST00000442054 DPF2Q92785 391 aa8.76□□□□□ -1.01
CDC42BPA-208ENST00000442054 TMEM63CQ9P1W3 806 aa8.76□□□□□ -1.01
CDC42BPA-208ENST00000442054 TJP1Q07157 1748 aa8.75□□□□□ -1.01
CDC42BPA-208ENST00000442054 RAB11FIP3O75154 756 aa8.75□□□□□ -1.01
CDC42BPA-208ENST00000442054 ARHGEF6Q15052 776 aa8.75□□□□□ -1.01
CDC42BPA-208ENST00000442054 TTF1Q15361 905 aaPredicted RBP8.75□□□□□ -1.01
CDC42BPA-208ENST00000442054 MYCNP04198 464 aaPredicted RBP8.75□□□□□ -1.01
CDC42BPA-208ENST00000442054 CACNB3P54284 484 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms