RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 PCCAP05165 728 aaPredicted RBP15.76■□□□□ 0.11
HERPUD1-204ENST00000439977 ZFYP08048 801 aaPredicted RBP15.76■□□□□ 0.11
HERPUD1-204ENST00000439977 PHKA1P46020 1223 aa15.76■□□□□ 0.11
HERPUD1-204ENST00000439977 LRRFIP1Q32MZ4 808 aaKnown RBP15.76■□□□□ 0.11
HERPUD1-204ENST00000439977 CCDC82Q8N4S0 544 aa15.76■□□□□ 0.11
HERPUD1-204ENST00000439977 KIAA1468Q9P260 1216 aa15.76■□□□□ 0.11
HERPUD1-204ENST00000439977 TRMT112Q9UI30 125 aaKnown RBP15.76■□□□□ 0.11
HERPUD1-204ENST00000439977 RIPOR2Q9Y4F9 1068 aa15.76■□□□□ 0.11
HERPUD1-204ENST00000439977 CPDO75976 1380 aa15.76■□□□□ 0.11
HERPUD1-204ENST00000439977 ZNF202O95125 648 aa15.76■□□□□ 0.11
HERPUD1-204ENST00000439977 CAVIN2O95810 425 aa15.76■□□□□ 0.11
HERPUD1-204ENST00000439977 MRFAP1L1Q96HT8 127 aa15.76■□□□□ 0.11
HERPUD1-204ENST00000439977 WWC3Q9ULE0 1092 aa15.76■□□□□ 0.11
HERPUD1-204ENST00000439977 GLI3P10071 1580 aa15.76■□□□□ 0.11
HERPUD1-204ENST00000439977 EVCP57679 992 aa15.75■□□□□ 0.11
HERPUD1-204ENST00000439977 GNL2Q13823 731 aaKnown RBP15.75■□□□□ 0.11
HERPUD1-204ENST00000439977 SARM1Q6SZW1 724 aa15.75■□□□□ 0.11
HERPUD1-204ENST00000439977 ALG1Q9BT22 464 aa15.75■□□□□ 0.11
HERPUD1-204ENST00000439977 ZNF532Q9HCE3 1301 aa15.75■□□□□ 0.11
HERPUD1-204ENST00000439977 CSF1RP07333 972 aa15.75■□□□□ 0.11
HERPUD1-204ENST00000439977 CDC27P30260 824 aa15.75■□□□□ 0.11
HERPUD1-204ENST00000439977 KIF23Q02241 960 aaPredicted RBP15.75■□□□□ 0.11
HERPUD1-204ENST00000439977 NKX1-1Q15270 411 aaPredicted RBP15.75■□□□□ 0.11
HERPUD1-204ENST00000439977 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.75■□□□□ 0.11
HERPUD1-204ENST00000439977 IFNKQ9P0W0 207 aa15.75■□□□□ 0.11
HERPUD1-204ENST00000439977 IRS4O14654 1257 aaPredicted RBP15.74■□□□□ 0.11
HERPUD1-204ENST00000439977 SLC3A2P08195 630 aaKnown RBP15.74■□□□□ 0.11
HERPUD1-204ENST00000439977 PFKFB1P16118 471 aa15.74■□□□□ 0.11
HERPUD1-204ENST00000439977 METAP2P50579 478 aaKnown RBP eCLIP15.74■□□□□ 0.11
HERPUD1-204ENST00000439977 ANO1Q5XXA6 986 aa15.74■□□□□ 0.11
HERPUD1-204ENST00000439977 CEP135Q66GS9 1140 aa15.74■□□□□ 0.11
HERPUD1-204ENST00000439977 ATL3Q6DD88 541 aa15.74■□□□□ 0.11
HERPUD1-204ENST00000439977 NFXL1Q6ZNB6 911 aa15.74■□□□□ 0.11
HERPUD1-204ENST00000439977 NLRP10Q86W26 655 aa15.74■□□□□ 0.11
HERPUD1-204ENST00000439977 CLIC6Q96NY7 704 aa15.74■□□□□ 0.11
HERPUD1-204ENST00000439977 LMOD1P29536 600 aaPredicted RBP15.74■□□□□ 0.11
HERPUD1-204ENST00000439977 SPECC1Q5M775 1068 aa15.74■□□□□ 0.11
HERPUD1-204ENST00000439977 CCDC112Q8NEF3 446 aa15.74■□□□□ 0.11
HERPUD1-204ENST00000439977 KCNG4Q8TDN1 519 aa15.74■□□□□ 0.11
HERPUD1-204ENST00000439977 CARD10Q9BWT7 1032 aa15.74■□□□□ 0.11
HERPUD1-204ENST00000439977 XPO4Q9C0E2 1151 aaKnown RBP15.74■□□□□ 0.11
HERPUD1-204ENST00000439977 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.74■□□□□ 0.112e-6■□□□□ 10.1
HERPUD1-204ENST00000439977 NAT10Q9H0A0 1025 aaKnown RBP15.74■□□□□ 0.11
HERPUD1-204ENST00000439977 KCPQ6ZWJ8 1503 aa15.74■□□□□ 0.11
HERPUD1-204ENST00000439977 ADD2P35612 726 aa15.74■□□□□ 0.11
HERPUD1-204ENST00000439977 NCBP1Q09161 790 aaKnown RBP15.74■□□□□ 0.11
HERPUD1-204ENST00000439977 NBPF11Q86T75 865 aa15.74■□□□□ 0.11
HERPUD1-204ENST00000439977 ANGEL1Q9UNK9 670 aaKnown RBP15.74■□□□□ 0.11
HERPUD1-204ENST00000439977 LAMA4Q16363 1823 aa15.74■□□□□ 0.11
HERPUD1-204ENST00000439977 MROH7-TTC4A0A0A0MT08 1334 aa15.73■□□□□ 0.11
HERPUD1-204ENST00000439977 ANKRD18BA2A2Z9 1011 aa15.73■□□□□ 0.11
HERPUD1-204ENST00000439977 NPHP1O15259 732 aa15.73■□□□□ 0.11
HERPUD1-204ENST00000439977 STARD3NLO95772 234 aa15.73■□□□□ 0.11
HERPUD1-204ENST00000439977 CTDSPL2Q05D32 466 aa15.73■□□□□ 0.11
HERPUD1-204ENST00000439977 HSP90AA4PQ58FG1 418 aa15.73■□□□□ 0.11
HERPUD1-204ENST00000439977 CCDC102BQ68D86 513 aa15.73■□□□□ 0.11
HERPUD1-204ENST00000439977 GIGYF2Q6Y7W6 1299 aaKnown RBP15.73■□□□□ 0.11
HERPUD1-204ENST00000439977 VPS37DQ86XT2 251 aa15.73■□□□□ 0.11
HERPUD1-204ENST00000439977 CMTR1Q8N1G2 835 aaKnown RBP15.73■□□□□ 0.11
HERPUD1-204ENST00000439977 ZKSCAN3Q9BRR0 538 aa15.73■□□□□ 0.11
HERPUD1-204ENST00000439977 TOMM22Q9NS69 142 aa15.73■□□□□ 0.11
HERPUD1-204ENST00000439977 POLR3EQ9NVU0 708 aa15.73■□□□□ 0.11
HERPUD1-204ENST00000439977 ZBTB1Q9Y2K1 713 aa15.73■□□□□ 0.11
HERPUD1-204ENST00000439977 KAT6BQ8WYB5 2073 aa15.73■□□□□ 0.11
HERPUD1-204ENST00000439977 ADAMTSL3P82987 1691 aa15.73■□□□□ 0.11
HERPUD1-204ENST00000439977 CDC25BP30305 580 aa15.73■□□□□ 0.11
HERPUD1-204ENST00000439977 CCZ1BP86790 482 aa15.73■□□□□ 0.11
HERPUD1-204ENST00000439977 CCZ1P86791 482 aaPredicted RBP15.73■□□□□ 0.11
HERPUD1-204ENST00000439977 RRP12Q5JTH9 1297 aaKnown RBP15.73■□□□□ 0.11
HERPUD1-204ENST00000439977 AXDND1Q5T1B0 1012 aaPredicted RBP15.73■□□□□ 0.11
HERPUD1-204ENST00000439977 TMC6Q7Z403 805 aa15.73■□□□□ 0.11
HERPUD1-204ENST00000439977 SLC4A9Q96Q91 983 aa15.73■□□□□ 0.11
HERPUD1-204ENST00000439977 CTIFO43310 598 aaKnown RBP15.72■□□□□ 0.11
HERPUD1-204ENST00000439977 ATP1A3P13637 1013 aa15.72■□□□□ 0.11
HERPUD1-204ENST00000439977 CTSWP56202 376 aa15.72■□□□□ 0.11
HERPUD1-204ENST00000439977 KRT40Q6A162 431 aa15.72■□□□□ 0.11
HERPUD1-204ENST00000439977 NEDD4P46934 1319 aa15.72■□□□□ 0.11
HERPUD1-204ENST00000439977 A0A1W2PQ27 194 aa15.72■□□□□ 0.11
HERPUD1-204ENST00000439977 A0A1W2PQ64 194 aa15.72■□□□□ 0.11
HERPUD1-204ENST00000439977 A0A1W2PQD8 194 aa15.72■□□□□ 0.11
HERPUD1-204ENST00000439977 SMTNL1A8MU46 457 aa15.72■□□□□ 0.11
HERPUD1-204ENST00000439977 PTPN14Q15678 1187 aa15.72■□□□□ 0.11
HERPUD1-204ENST00000439977 AIDAQ96BJ3 306 aa15.72■□□□□ 0.11
HERPUD1-204ENST00000439977 SLAIN2Q9P270 581 aa15.72■□□□□ 0.11
HERPUD1-204ENST00000439977 MAP3K15Q6ZN16 1313 aa15.72■□□□□ 0.11
HERPUD1-204ENST00000439977 IGSF3O75054 1194 aa15.71■□□□□ 0.11
HERPUD1-204ENST00000439977 PDE6AP16499 860 aa15.71■□□□□ 0.11
HERPUD1-204ENST00000439977 PKNOX2Q96KN3 472 aa15.71■□□□□ 0.11
HERPUD1-204ENST00000439977 COL5A2P05997 1499 aaPredicted RBP15.71■□□□□ 0.11
HERPUD1-204ENST00000439977 PDE8BO95263 885 aa15.71■□□□□ 0.11
HERPUD1-204ENST00000439977 YEATS4O95619 227 aa15.71■□□□□ 0.11
HERPUD1-204ENST00000439977 TRIM28Q13263 835 aaKnown RBP15.71■□□□□ 0.11
HERPUD1-204ENST00000439977 APOA5Q6Q788 366 aa15.71■□□□□ 0.11
HERPUD1-204ENST00000439977 FBXL16Q8N461 479 aa15.71■□□□□ 0.11
HERPUD1-204ENST00000439977 RIC1Q4ADV7 1423 aa15.71■□□□□ 0.1
HERPUD1-204ENST00000439977 BRAPQ7Z569 592 aa15.71■□□□□ 0.1
HERPUD1-204ENST00000439977 ANKRD7Q92527 254 aa15.71■□□□□ 0.1
HERPUD1-204ENST00000439977 IQSEC3Q9UPP2 1182 aaPredicted RBP15.71■□□□□ 0.1
HERPUD1-204ENST00000439977 PRKAB2O43741 272 aa15.7■□□□□ 0.1
HERPUD1-204ENST00000439977 ATP2B1P20020 1258 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms