RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 RGL2O15211 777 aa5.73□□□□□ -1.49
EDEM3-203ENST00000439962 PRDX5P30044 214 aa5.73□□□□□ -1.49
EDEM3-203ENST00000439962 NUCB2P80303 420 aa5.73□□□□□ -1.49
EDEM3-203ENST00000439962 HSP90AB4PQ58FF6 505 aa5.73□□□□□ -1.49
EDEM3-203ENST00000439962 RSBN1LQ6PCB5 846 aaPredicted RBP5.73□□□□□ -1.49
EDEM3-203ENST00000439962 SULF1Q8IWU6 871 aa5.73□□□□□ -1.49
EDEM3-203ENST00000439962 CDAN1Q8IWY9 1227 aa5.73□□□□□ -1.49
EDEM3-203ENST00000439962 DCPSQ96C86 337 aaKnown RBP5.73□□□□□ -1.49
EDEM3-203ENST00000439962 KIF2CQ99661 725 aa5.73□□□□□ -1.49
EDEM3-203ENST00000439962 RTFDC1Q9BY42 306 aaPredicted RBP5.73□□□□□ -1.49
EDEM3-203ENST00000439962 TDRD3Q9H7E2 651 aaKnown RBP5.73□□□□□ -1.49
EDEM3-203ENST00000439962 MYOZ2Q9NPC6 264 aa5.73□□□□□ -1.49
EDEM3-203ENST00000439962 ADARB2Q9NS39 739 aaKnown RBP5.73□□□□□ -1.49
EDEM3-203ENST00000439962 TLR7Q9NYK1 1049 aaKnown RBP5.73□□□□□ -1.49
EDEM3-203ENST00000439962 POLR2AP24928 1970 aaKnown RBP5.73□□□□□ -1.49
EDEM3-203ENST00000439962 FSD2A1L4K1 749 aa5.73□□□□□ -1.49
EDEM3-203ENST00000439962 MAP4K4O95819 1239 aaPredicted RBP5.73□□□□□ -1.49
EDEM3-203ENST00000439962 IFIT1P09914 478 aaKnown RBP5.73□□□□□ -1.49
EDEM3-203ENST00000439962 SLC4A3P48751 1232 aa5.73□□□□□ -1.49
EDEM3-203ENST00000439962 ATP8B2P98198 1209 aa5.73□□□□□ -1.49
EDEM3-203ENST00000439962 ATG9AQ7Z3C6 839 aa5.73□□□□□ -1.49
EDEM3-203ENST00000439962 PODNQ7Z5L7 613 aa5.73□□□□□ -1.49
EDEM3-203ENST00000439962 TICAM2Q86XR7 235 aa5.73□□□□□ -1.49
EDEM3-203ENST00000439962 PLA2G12BQ9BX93 195 aa5.73□□□□□ -1.49
EDEM3-203ENST00000439962 LEMD3Q9Y2U8 911 aa5.73□□□□□ -1.49
EDEM3-203ENST00000439962 SCN9AQ15858 1988 aa5.72□□□□□ -1.49
EDEM3-203ENST00000439962 WNT10BO00744 389 aa5.72□□□□□ -1.49
EDEM3-203ENST00000439962 AOC2O75106 756 aa5.72□□□□□ -1.49
EDEM3-203ENST00000439962 PICALMQ13492 652 aa5.72□□□□□ -1.49
EDEM3-203ENST00000439962 DLGAP5Q15398 846 aa5.72□□□□□ -1.49
EDEM3-203ENST00000439962 TMC4Q7Z404 712 aa5.72□□□□□ -1.49
EDEM3-203ENST00000439962 PNMA8AQ86V59 439 aaPredicted RBP5.72□□□□□ -1.49
EDEM3-203ENST00000439962 LDHDQ86WU2 507 aa5.72□□□□□ -1.49
EDEM3-203ENST00000439962 STK11IPQ8N1F8 1099 aa5.72□□□□□ -1.49
EDEM3-203ENST00000439962 PRMT6Q96LA8 375 aaPredicted RBP5.72□□□□□ -1.49
EDEM3-203ENST00000439962 PODXL2Q9NZ53 605 aa5.72□□□□□ -1.49
EDEM3-203ENST00000439962 RIC1Q4ADV7 1423 aa5.72□□□□□ -1.49
EDEM3-203ENST00000439962 GOLGA6L22H0YM25 854 aa5.72□□□□□ -1.49
EDEM3-203ENST00000439962 ERC2O15083 957 aa5.72□□□□□ -1.49
EDEM3-203ENST00000439962 ST18O60284 1047 aa5.72□□□□□ -1.49
EDEM3-203ENST00000439962 PDIA4P13667 645 aaKnown RBP5.72□□□□□ -1.49
EDEM3-203ENST00000439962 SLC5A1P13866 664 aa5.72□□□□□ -1.49
EDEM3-203ENST00000439962 GSPT1P15170 499 aaKnown RBP5.72□□□□□ -1.49
EDEM3-203ENST00000439962 RFX5P48382 616 aaPredicted RBP5.72□□□□□ -1.49
EDEM3-203ENST00000439962 APLP1P51693 650 aa5.72□□□□□ -1.49
EDEM3-203ENST00000439962 HUNKP57058 714 aa5.72□□□□□ -1.49
EDEM3-203ENST00000439962 PUM3Q15397 648 aaKnown RBP5.72□□□□□ -1.49
EDEM3-203ENST00000439962 CFAP100Q494V2 611 aa5.72□□□□□ -1.49
EDEM3-203ENST00000439962 SLFNL1Q499Z3 407 aa5.72□□□□□ -1.49
EDEM3-203ENST00000439962 DACT2Q5SW24 774 aa5.72□□□□□ -1.49
EDEM3-203ENST00000439962 MIGA2Q7L4E1 593 aa5.72□□□□□ -1.49
EDEM3-203ENST00000439962 FAM43AQ8N2R8 423 aa5.72□□□□□ -1.49
EDEM3-203ENST00000439962 EDC3Q96F86 508 aaKnown RBP5.72□□□□□ -1.49
EDEM3-203ENST00000439962 XAGE2Q96GT9 111 aa5.72□□□□□ -1.49
EDEM3-203ENST00000439962 ZIC5Q96T25 663 aa5.72□□□□□ -1.49
EDEM3-203ENST00000439962 DNAJC2Q99543 621 aaKnown RBP5.72□□□□□ -1.49
EDEM3-203ENST00000439962 DBNDD2Q9BQY9 259 aa5.72□□□□□ -1.49
EDEM3-203ENST00000439962 USP26Q9BXU7 913 aa5.72□□□□□ -1.49
EDEM3-203ENST00000439962 COA1Q9GZY4 146 aa5.72□□□□□ -1.49
EDEM3-203ENST00000439962 TIAM2Q8IVF5 1701 aa5.71□□□□□ -1.49
EDEM3-203ENST00000439962 UBE2Q2LH0YL09 131 aa5.71□□□□□ -1.5
EDEM3-203ENST00000439962 MCCP23508 829 aa5.71□□□□□ -1.5
EDEM3-203ENST00000439962 MTX1Q13505 466 aa5.71□□□□□ -1.5
EDEM3-203ENST00000439962 RABL6Q3YEC7 729 aaPredicted RBP5.71□□□□□ -1.5
EDEM3-203ENST00000439962 CST9Q5W186 159 aa5.71□□□□□ -1.5
EDEM3-203ENST00000439962 AACSQ86V21 672 aa5.71□□□□□ -1.5
EDEM3-203ENST00000439962 ZSCAN29Q8IWY8 852 aaPredicted RBP5.71□□□□□ -1.5
EDEM3-203ENST00000439962 RBM46Q8TBY0 533 aaKnown RBP5.71□□□□□ -1.5
EDEM3-203ENST00000439962 CHMP4CQ96CF2 233 aa5.71□□□□□ -1.5
EDEM3-203ENST00000439962 RAI14Q9P0K7 980 aa5.71□□□□□ -1.5
EDEM3-203ENST00000439962 SZT2Q5T011 3432 aa5.71□□□□□ -1.5
EDEM3-203ENST00000439962 MROH5Q6ZUA9 1318 aa5.71□□□□□ -1.5
EDEM3-203ENST00000439962 DUOX1Q9NRD9 1551 aa5.71□□□□□ -1.5
EDEM3-203ENST00000439962 ITGBL1O95965 494 aaPredicted RBP5.71□□□□□ -1.5
EDEM3-203ENST00000439962 CHGBP05060 677 aa5.71□□□□□ -1.5
EDEM3-203ENST00000439962 VIL1P09327 827 aaKnown RBP5.71□□□□□ -1.5
EDEM3-203ENST00000439962 MRE11P49959 708 aa5.71□□□□□ -1.5
EDEM3-203ENST00000439962 POLA2Q14181 598 aa5.71□□□□□ -1.5
EDEM3-203ENST00000439962 CCDC102BQ68D86 513 aa5.71□□□□□ -1.5
EDEM3-203ENST00000439962 SSH3Q8TE77 659 aa5.71□□□□□ -1.5
EDEM3-203ENST00000439962 LRRCC1Q9C099 1032 aa5.71□□□□□ -1.5
EDEM3-203ENST00000439962 MYH3P11055 1940 aa5.7□□□□□ -1.5
EDEM3-203ENST00000439962 TMEM88BA6NKF7 163 aa5.7□□□□□ -1.5
EDEM3-203ENST00000439962 FAM196BA6NMK8 535 aa5.7□□□□□ -1.5
EDEM3-203ENST00000439962 IDH1O75874 414 aaKnown RBP5.7□□□□□ -1.5
EDEM3-203ENST00000439962 PDE1AP54750 535 aa5.7□□□□□ -1.5
EDEM3-203ENST00000439962 L3MBTL3Q96JM7 780 aaPredicted RBP5.7□□□□□ -1.5
EDEM3-203ENST00000439962 TMEM39BQ9GZU3 492 aa5.7□□□□□ -1.5
EDEM3-203ENST00000439962 LRP2BPQ9P2M1 347 aa5.7□□□□□ -1.5
EDEM3-203ENST00000439962 DLEC1Q9Y238 1755 aa5.7□□□□□ -1.5
EDEM3-203ENST00000439962 SNED1Q8TER0 1413 aa5.7□□□□□ -1.5
EDEM3-203ENST00000439962 IL15P40933 162 aaPredicted RBP5.7□□□□□ -1.5
EDEM3-203ENST00000439962 VEGFBP49765 207 aa5.7□□□□□ -1.5
EDEM3-203ENST00000439962 RASGRF1Q13972 1273 aa5.7□□□□□ -1.5
EDEM3-203ENST00000439962 UBE4AQ14139 1066 aa5.7□□□□□ -1.5
EDEM3-203ENST00000439962 TTC39AQ5SRH9 613 aa5.7□□□□□ -1.5
EDEM3-203ENST00000439962 STRIP1Q5VSL9 837 aa5.7□□□□□ -1.5
EDEM3-203ENST00000439962 CDC37L1Q7L3B6 337 aa5.7□□□□□ -1.5
EDEM3-203ENST00000439962 DZIP1Q86YF9 867 aaKnown RBP5.7□□□□□ -1.5
EDEM3-203ENST00000439962 MIGA1Q8NAN2 632 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms