RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 KCNH3Q9ULD8 1083 aa7.64□□□□□ -1.19
CSDE1-205ENST00000438362 ZNF652Q9Y2D9 606 aa7.64□□□□□ -1.19
CSDE1-205ENST00000438362 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.64□□□□□ -1.194e-11■□□□□ 9.7
CSDE1-205ENST00000438362 B4E1Z4 1266 aa7.64□□□□□ -1.19
CSDE1-205ENST00000438362 SASH1O94885 1247 aa7.64□□□□□ -1.19
CSDE1-205ENST00000438362 HSPD1P10809 573 aaKnown RBP7.64□□□□□ -1.19
CSDE1-205ENST00000438362 UBA7P41226 1012 aa7.64□□□□□ -1.19
CSDE1-205ENST00000438362 MTX1Q13505 466 aa7.64□□□□□ -1.19
CSDE1-205ENST00000438362 FAM89AQ96GI7 184 aa7.64□□□□□ -1.19
CSDE1-205ENST00000438362 MKNK2Q9HBH9 465 aa7.64□□□□□ -1.19
CSDE1-205ENST00000438362 BMP2KQ9NSY1 1161 aaPredicted RBP7.64□□□□□ -1.19
CSDE1-205ENST00000438362 EVCP57679 992 aa7.63□□□□□ -1.19
CSDE1-205ENST00000438362 KARSQ15046 597 aaKnown RBP7.63□□□□□ -1.19
CSDE1-205ENST00000438362 RRAGBQ5VZM2 374 aa7.63□□□□□ -1.19
CSDE1-205ENST00000438362 CACTINQ8WUQ7 758 aaKnown RBP7.63□□□□□ -1.19
CSDE1-205ENST00000438362 ZNF215Q9UL58 517 aaPredicted RBP7.63□□□□□ -1.19
CSDE1-205ENST00000438362 ADCY9O60503 1353 aa7.63□□□□□ -1.19
CSDE1-205ENST00000438362 NEXMIFQ5QGS0 1516 aa7.63□□□□□ -1.19
CSDE1-205ENST00000438362 CTAGE15A4D2H0 777 aa7.63□□□□□ -1.19
CSDE1-205ENST00000438362 CUTAO60888 179 aa7.63□□□□□ -1.19
CSDE1-205ENST00000438362 A1BGP04217 495 aa7.63□□□□□ -1.19
CSDE1-205ENST00000438362 SSBP05455 408 aaKnown RBP eCLIP7.63□□□□□ -1.19
CSDE1-205ENST00000438362 CTAGE8P0CG41 777 aa7.63□□□□□ -1.19
CSDE1-205ENST00000438362 CYP7A1P22680 504 aa7.63□□□□□ -1.19
CSDE1-205ENST00000438362 KIF5BP33176 963 aa7.63□□□□□ -1.19
CSDE1-205ENST00000438362 STX17P56962 302 aa7.63□□□□□ -1.19
CSDE1-205ENST00000438362 MCM6Q14566 821 aa7.63□□□□□ -1.19
CSDE1-205ENST00000438362 RILPL1Q5EBL4 403 aa7.63□□□□□ -1.19
CSDE1-205ENST00000438362 KRT40Q6A162 431 aa7.63□□□□□ -1.19
CSDE1-205ENST00000438362 CTAGE6Q86UF2 777 aa7.63□□□□□ -1.19
CSDE1-205ENST00000438362 CTAGE4Q8IX94 777 aa7.63□□□□□ -1.19
CSDE1-205ENST00000438362 CEP112Q8N8E3 955 aa7.63□□□□□ -1.19
CSDE1-205ENST00000438362 CDC5LQ99459 802 aaKnown RBP7.63□□□□□ -1.19
CSDE1-205ENST00000438362 PCDHA7Q9UN72 937 aa7.63□□□□□ -1.19
CSDE1-205ENST00000438362 USO1O60763 962 aaKnown RBP7.63□□□□□ -1.19
CSDE1-205ENST00000438362 BICDL1Q6ZP65 573 aa7.63□□□□□ -1.19
CSDE1-205ENST00000438362 HELBQ8NG08 1087 aaPredicted RBP7.63□□□□□ -1.19
CSDE1-205ENST00000438362 RMND1Q9NWS8 449 aa7.63□□□□□ -1.19
CSDE1-205ENST00000438362 RCOR1Q9UKL0 485 aa7.63□□□□□ -1.19
CSDE1-205ENST00000438362 GOLGA6L10A6NI86 522 aa7.63□□□□□ -1.19
CSDE1-205ENST00000438362 IRS4O14654 1257 aaPredicted RBP7.63□□□□□ -1.19
CSDE1-205ENST00000438362 ARHGAP6O43182 974 aa7.63□□□□□ -1.19
CSDE1-205ENST00000438362 GNAT2P19087 354 aa7.63□□□□□ -1.19
CSDE1-205ENST00000438362 PDIA3P30101 505 aaKnown RBP7.63□□□□□ -1.19
CSDE1-205ENST00000438362 USP5P45974 858 aa7.63□□□□□ -1.19
CSDE1-205ENST00000438362 MTIF2P46199 727 aaKnown RBP7.63□□□□□ -1.19
CSDE1-205ENST00000438362 IFIT1BQ5T764 474 aaKnown RBP7.63□□□□□ -1.19
CSDE1-205ENST00000438362 NSUN7Q8NE18 718 aaKnown RBP7.63□□□□□ -1.19
CSDE1-205ENST00000438362 ZHX3Q9H4I2 956 aa7.63□□□□□ -1.19
CSDE1-205ENST00000438362 LZTFL1Q9NQ48 299 aa7.63□□□□□ -1.19
CSDE1-205ENST00000438362 NEURL4Q96JN8 1562 aa7.62□□□□□ -1.19
CSDE1-205ENST00000438362 KAT6BQ8WYB5 2073 aa7.62□□□□□ -1.19
CSDE1-205ENST00000438362 CRB1P82279 1406 aa7.62□□□□□ -1.19
CSDE1-205ENST00000438362 CTAGE9A4FU28 777 aa7.62□□□□□ -1.19
CSDE1-205ENST00000438362 TSPY2A6NKD2 308 aa7.62□□□□□ -1.19
CSDE1-205ENST00000438362 CDC25BP30305 580 aa7.62□□□□□ -1.19
CSDE1-205ENST00000438362 MAGEB6Q8N7X4 407 aa7.62□□□□□ -1.19
CSDE1-205ENST00000438362 CARD6Q9BX69 1037 aa7.62□□□□□ -1.19
CSDE1-205ENST00000438362 PRAMEF22A3QJZ6 481 aa7.62□□□□□ -1.19
CSDE1-205ENST00000438362 AKR1B15C9JRZ8 316 aaPredicted RBP7.62□□□□□ -1.19
CSDE1-205ENST00000438362 KIAA0754O94854 1291 aa7.62□□□□□ -1.19
CSDE1-205ENST00000438362 IL2RBP14784 551 aa7.62□□□□□ -1.19
CSDE1-205ENST00000438362 PFKFB1P16118 471 aa7.62□□□□□ -1.19
CSDE1-205ENST00000438362 PAFAH1B1P43034 410 aa7.62□□□□□ -1.19
CSDE1-205ENST00000438362 ZAP70P43403 619 aa7.62□□□□□ -1.19
CSDE1-205ENST00000438362 RESTQ13127 1097 aa7.62□□□□□ -1.19
CSDE1-205ENST00000438362 DIS3L2Q8IYB7 885 aaKnown RBP7.62□□□□□ -1.19
CSDE1-205ENST00000438362 TRIM47Q96LD4 638 aa7.62□□□□□ -1.19
CSDE1-205ENST00000438362 ZNF287Q9HBT7 754 aa7.62□□□□□ -1.19
CSDE1-205ENST00000438362 TCP11L1Q9NUJ3 509 aa7.62□□□□□ -1.19
CSDE1-205ENST00000438362 IQSEC3Q9UPP2 1182 aaPredicted RBP7.62□□□□□ -1.19
CSDE1-205ENST00000438362 A0A1W2PQ27 194 aa7.62□□□□□ -1.19
CSDE1-205ENST00000438362 A0A1W2PQ64 194 aa7.62□□□□□ -1.19
CSDE1-205ENST00000438362 A0A1W2PQD8 194 aa7.62□□□□□ -1.19
CSDE1-205ENST00000438362 EXOC5O00471 708 aa7.62□□□□□ -1.19
CSDE1-205ENST00000438362 MBD4O95243 580 aa7.62□□□□□ -1.19
CSDE1-205ENST00000438362 PHKG2P15735 406 aa7.62□□□□□ -1.19
CSDE1-205ENST00000438362 TUBB4BP68371 445 aa7.62□□□□□ -1.19
CSDE1-205ENST00000438362 CCDC152Q4G0S7 254 aa7.62□□□□□ -1.19
CSDE1-205ENST00000438362 DZIP1Q86YF9 867 aaKnown RBP7.62□□□□□ -1.19
CSDE1-205ENST00000438362 MLKLQ8NB16 471 aa7.62□□□□□ -1.19
CSDE1-205ENST00000438362 FBXO18Q8NFZ0 1043 aa7.62□□□□□ -1.19
CSDE1-205ENST00000438362 SMARCC1Q92922 1105 aaPredicted RBP7.62□□□□□ -1.19
CSDE1-205ENST00000438362 PHKBQ93100 1093 aa7.62□□□□□ -1.19
CSDE1-205ENST00000438362 NFE2L3Q9Y4A8 694 aa7.62□□□□□ -1.19
CSDE1-205ENST00000438362 PCDH11XQ9BZA7 1347 aa7.61□□□□□ -1.19
CSDE1-205ENST00000438362 PCDH11YQ9BZA8 1340 aa7.61□□□□□ -1.19
CSDE1-205ENST00000438362 FGFR1OPO95684 399 aaKnown RBP7.61□□□□□ -1.19
CSDE1-205ENST00000438362 CMA1P23946 247 aa7.61□□□□□ -1.19
CSDE1-205ENST00000438362 NDUFA8P51970 172 aa7.61□□□□□ -1.19
CSDE1-205ENST00000438362 RBM6P78332 1123 aaKnown RBP7.61□□□□□ -1.19
CSDE1-205ENST00000438362 ATP2B2Q01814 1243 aa7.61□□□□□ -1.19
CSDE1-205ENST00000438362 PDE4BQ07343 736 aa7.61□□□□□ -1.19
CSDE1-205ENST00000438362 IKQ13123 557 aaPredicted RBP7.61□□□□□ -1.19
CSDE1-205ENST00000438362 C11orf57Q6ZUT1 292 aaPredicted RBP7.61□□□□□ -1.19
CSDE1-205ENST00000438362 CACNA2D4Q7Z3S7 1137 aa7.61□□□□□ -1.19
CSDE1-205ENST00000438362 ARHGEF25Q86VW2 580 aa7.61□□□□□ -1.19
CSDE1-205ENST00000438362 ZNF444Q8N0Y2 327 aaPredicted RBP7.61□□□□□ -1.19
CSDE1-205ENST00000438362 EHBP1Q8NDI1 1231 aa7.61□□□□□ -1.19
CSDE1-205ENST00000438362 RTEL1Q9NZ71 1219 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms