RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 HELBQ8NG08 1087 aaPredicted RBP12.15□□□□□ -0.46
CLSTN1-203ENST00000435891 PRIMPOLQ96LW4 560 aa12.15□□□□□ -0.46
CLSTN1-203ENST00000435891 ZNF396Q96N95 335 aaPredicted RBP12.15□□□□□ -0.46
CLSTN1-203ENST00000435891 ORC3Q9UBD5 711 aaPredicted RBP12.15□□□□□ -0.46
CLSTN1-203ENST00000435891 CTNNA3Q9UI47 895 aa12.15□□□□□ -0.46
CLSTN1-203ENST00000435891 KIF3AQ9Y496 699 aa12.15□□□□□ -0.46
CLSTN1-203ENST00000435891 CLIP2Q9UDT6 1046 aa12.14□□□□□ -0.47
CLSTN1-203ENST00000435891 ZNF213O14771 459 aa12.14□□□□□ -0.47
CLSTN1-203ENST00000435891 KINO60870 393 aaKnown RBP12.14□□□□□ -0.47
CLSTN1-203ENST00000435891 PHKA1P46020 1223 aa12.14□□□□□ -0.47
CLSTN1-203ENST00000435891 NDUFA8P51970 172 aa12.14□□□□□ -0.47
CLSTN1-203ENST00000435891 DHX40Q8IX18 779 aaKnown RBP12.14□□□□□ -0.47
CLSTN1-203ENST00000435891 LINC00301Q8NCQ3 95 aa12.14□□□□□ -0.47
CLSTN1-203ENST00000435891 FBXO18Q8NFZ0 1043 aa12.14□□□□□ -0.47
CLSTN1-203ENST00000435891 C8orf76Q96K31 380 aa12.14□□□□□ -0.47
CLSTN1-203ENST00000435891 CNNM1Q9NRU3 951 aa12.14□□□□□ -0.47
CLSTN1-203ENST00000435891 FBXO3Q9UK99 471 aa12.14□□□□□ -0.47
CLSTN1-203ENST00000435891 IDH1O75874 414 aaKnown RBP12.14□□□□□ -0.47
CLSTN1-203ENST00000435891 CTSWP56202 376 aa12.14□□□□□ -0.47
CLSTN1-203ENST00000435891 CYB5R4Q7L1T6 521 aa12.14□□□□□ -0.47
CLSTN1-203ENST00000435891 FMR1NBQ8N0W7 255 aaPredicted RBP12.14□□□□□ -0.47
CLSTN1-203ENST00000435891 NCOA7Q8NI08 942 aa12.14□□□□□ -0.47
CLSTN1-203ENST00000435891 BTG4Q9NY30 223 aa12.14□□□□□ -0.47
CLSTN1-203ENST00000435891 TBC1D2BQ9UPU7 963 aa12.14□□□□□ -0.47
CLSTN1-203ENST00000435891 NEDD4P46934 1319 aa12.13□□□□□ -0.47
CLSTN1-203ENST00000435891 IRS4O14654 1257 aaPredicted RBP12.13□□□□□ -0.47
CLSTN1-203ENST00000435891 STARD3NLO95772 234 aa12.13□□□□□ -0.47
CLSTN1-203ENST00000435891 TPM3P06753 285 aa12.13□□□□□ -0.47
CLSTN1-203ENST00000435891 ADD2P35612 726 aa12.13□□□□□ -0.47
CLSTN1-203ENST00000435891 RTEL1Q9NZ71 1219 aa12.13□□□□□ -0.47
CLSTN1-203ENST00000435891 WWC3Q9ULE0 1092 aa12.13□□□□□ -0.47
CLSTN1-203ENST00000435891 UBE2Q2LH0YL09 131 aa12.13□□□□□ -0.47
CLSTN1-203ENST00000435891 STX1AQ16623 288 aa12.13□□□□□ -0.47
CLSTN1-203ENST00000435891 RALYLQ86SE5 291 aaKnown RBP12.13□□□□□ -0.47
CLSTN1-203ENST00000435891 ABCA3Q99758 1704 aa12.13□□□□□ -0.47
CLSTN1-203ENST00000435891 RIOK3O14730 519 aaKnown RBP12.13□□□□□ -0.47
CLSTN1-203ENST00000435891 CYP19A1P11511 503 aaPredicted RBP12.13□□□□□ -0.47
CLSTN1-203ENST00000435891 SYTL4Q96C24 671 aaPredicted RBP12.13□□□□□ -0.47
CLSTN1-203ENST00000435891 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.13□□□□□ -0.47
CLSTN1-203ENST00000435891 TRMT112Q9UI30 125 aaKnown RBP12.13□□□□□ -0.47
CLSTN1-203ENST00000435891 UBN2Q6ZU65 1347 aa12.12□□□□□ -0.47
CLSTN1-203ENST00000435891 GTF2F1P35269 517 aaKnown RBP eCLIP12.12□□□□□ -0.47
CLSTN1-203ENST00000435891 MRPS27Q92552 414 aaKnown RBP12.12□□□□□ -0.47
CLSTN1-203ENST00000435891 C16orf45Q96MC5 204 aaPredicted RBP12.12□□□□□ -0.47
CLSTN1-203ENST00000435891 GOLGA6L19H0YKK7 550 aa12.12□□□□□ -0.47
CLSTN1-203ENST00000435891 CHAF1AQ13111 956 aaPredicted RBP12.12□□□□□ -0.47
CLSTN1-203ENST00000435891 LRRFIP1Q32MZ4 808 aaKnown RBP12.12□□□□□ -0.47
CLSTN1-203ENST00000435891 MYSM1Q5VVJ2 828 aa12.12□□□□□ -0.47
CLSTN1-203ENST00000435891 CCDC102BQ68D86 513 aa12.12□□□□□ -0.47
CLSTN1-203ENST00000435891 ADALQ6DHV7 355 aa12.12□□□□□ -0.47
CLSTN1-203ENST00000435891 ZNF532Q9HCE3 1301 aa12.12□□□□□ -0.47
CLSTN1-203ENST00000435891 ANKRD18BA2A2Z9 1011 aa12.12□□□□□ -0.47
CLSTN1-203ENST00000435891 CPLX1O14810 134 aa12.12□□□□□ -0.47
CLSTN1-203ENST00000435891 APPP05067 770 aa12.12□□□□□ -0.47
CLSTN1-203ENST00000435891 U2AF2P26368 475 aaKnown RBP eCLIP12.12□□□□□ -0.473e-8■■■□□ 15.2
CLSTN1-203ENST00000435891 STK38Q15208 465 aa12.12□□□□□ -0.47
CLSTN1-203ENST00000435891 CDHR2Q9BYE9 1310 aa12.11□□□□□ -0.47
CLSTN1-203ENST00000435891 B4E1Z4 1266 aa12.11□□□□□ -0.47
CLSTN1-203ENST00000435891 CTAGE5O15320 804 aa12.11□□□□□ -0.47
CLSTN1-203ENST00000435891 PDE8BO95263 885 aa12.11□□□□□ -0.47
CLSTN1-203ENST00000435891 CDC27P30260 824 aa12.11□□□□□ -0.47
CLSTN1-203ENST00000435891 TAF3Q5VWG9 929 aa12.11□□□□□ -0.47
CLSTN1-203ENST00000435891 ATL3Q6DD88 541 aa12.11□□□□□ -0.47
CLSTN1-203ENST00000435891 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.11□□□□□ -0.47
CLSTN1-203ENST00000435891 AOPEPQ8N6M6 819 aa12.11□□□□□ -0.47
CLSTN1-203ENST00000435891 PHKBQ93100 1093 aa12.11□□□□□ -0.47
CLSTN1-203ENST00000435891 MYL10Q9BUA6 226 aa12.11□□□□□ -0.47
CLSTN1-203ENST00000435891 MYH7P12883 1935 aa12.11□□□□□ -0.47
CLSTN1-203ENST00000435891 ERICH4A6NGS2 130 aa12.11□□□□□ -0.47
CLSTN1-203ENST00000435891 DPCR1Q3MIW9 517 aa12.11□□□□□ -0.47
CLSTN1-203ENST00000435891 SDF4Q9BRK5 362 aa12.11□□□□□ -0.47
CLSTN1-203ENST00000435891 TEX13AQ9BXU3 409 aaPredicted RBP12.11□□□□□ -0.47
CLSTN1-203ENST00000435891 KIF23Q02241 960 aaPredicted RBP12.11□□□□□ -0.47
CLSTN1-203ENST00000435891 BCL2L12Q9HB09 334 aa12.11□□□□□ -0.47
CLSTN1-203ENST00000435891 TACC3Q9Y6A5 838 aa12.11□□□□□ -0.47
CLSTN1-203ENST00000435891 BECN2A8MW95 431 aa12.1□□□□□ -0.47
CLSTN1-203ENST00000435891 BIN1O00499 593 aa12.1□□□□□ -0.47
CLSTN1-203ENST00000435891 PDE6AP16499 860 aa12.1□□□□□ -0.47
CLSTN1-203ENST00000435891 MARCKSP29966 332 aaPredicted RBP12.1□□□□□ -0.47
CLSTN1-203ENST00000435891 TNNT3P45378 269 aaPredicted RBP12.1□□□□□ -0.47
CLSTN1-203ENST00000435891 SF3A1Q15459 793 aaKnown RBP12.1□□□□□ -0.47
CLSTN1-203ENST00000435891 SARM1Q6SZW1 724 aa12.1□□□□□ -0.47
CLSTN1-203ENST00000435891 SLIT2O94813 1529 aa12.1□□□□□ -0.47
CLSTN1-203ENST00000435891 ITGB4P16144 1822 aa12.1□□□□□ -0.47
CLSTN1-203ENST00000435891 USP27XA6NNY8 438 aa12.1□□□□□ -0.47
CLSTN1-203ENST00000435891 SPTLC2O15270 562 aa12.1□□□□□ -0.47
CLSTN1-203ENST00000435891 WDHD1O75717 1129 aaPredicted RBP12.1□□□□□ -0.47
CLSTN1-203ENST00000435891 FILIP1Q7Z7B0 1213 aa12.1□□□□□ -0.47
CLSTN1-203ENST00000435891 MICU3Q86XE3 530 aa12.1□□□□□ -0.47
CLSTN1-203ENST00000435891 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.1□□□□□ -0.47
CLSTN1-203ENST00000435891 DDX60Q8IY21 1712 aaKnown RBP12.1□□□□□ -0.47
CLSTN1-203ENST00000435891 MROH7-TTC4A0A0A0MT08 1334 aa12.1□□□□□ -0.47
CLSTN1-203ENST00000435891 TCRBV5S4A2TA0A5A2 114 aa12.1□□□□□ -0.47
CLSTN1-203ENST00000435891 AXDND1Q5T1B0 1012 aaPredicted RBP12.1□□□□□ -0.47
CLSTN1-203ENST00000435891 POLR3EQ9NVU0 708 aa12.1□□□□□ -0.47
CLSTN1-203ENST00000435891 ANO10Q9NW15 660 aa12.1□□□□□ -0.47
CLSTN1-203ENST00000435891 ANGEL1Q9UNK9 670 aaKnown RBP12.1□□□□□ -0.47
CLSTN1-203ENST00000435891 CAVIN2O95810 425 aa12.09□□□□□ -0.47
CLSTN1-203ENST00000435891 ABCC12Q96J65 1359 aa12.09□□□□□ -0.47
CLSTN1-203ENST00000435891 A0A1W2PQ27 194 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms