RNA–Protein interactions for RNA: ENST00000431893.3

SEC16A-206, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-206ENST00000431893 RFC1P35251 1148 aaPredicted RBP12.85□□□□□ -0.35
SEC16A-206ENST00000431893 NAA16Q6N069 864 aaPredicted RBP12.85□□□□□ -0.35
SEC16A-206ENST00000431893 STK38LQ9Y2H1 464 aa12.85□□□□□ -0.35
SEC16A-206ENST00000431893 RFC4P35249 363 aa12.85□□□□□ -0.35
SEC16A-206ENST00000431893 CALCOCO2Q13137 446 aa12.85□□□□□ -0.35
SEC16A-206ENST00000431893 BEND3Q5T5X7 828 aa12.85□□□□□ -0.35
SEC16A-206ENST00000431893 KLHL7Q8IXQ5 586 aa12.85□□□□□ -0.35
SEC16A-206ENST00000431893 VPS52Q8N1B4 723 aa12.85□□□□□ -0.35
SEC16A-206ENST00000431893 LDHCP07864 332 aa12.84□□□□□ -0.35
SEC16A-206ENST00000431893 ATP2A2P16615 1042 aaKnown RBP12.84□□□□□ -0.35
SEC16A-206ENST00000431893 CREB3L3Q68CJ9 461 aa12.84□□□□□ -0.35
SEC16A-206ENST00000431893 TACO1Q9BSH4 297 aaKnown RBP12.84□□□□□ -0.35
SEC16A-206ENST00000431893 LUC7L2Q9Y383 392 aaKnown RBP12.84□□□□□ -0.35
SEC16A-206ENST00000431893 E7EVH7 732 aa12.84□□□□□ -0.35
SEC16A-206ENST00000431893 ZFYP08048 801 aaPredicted RBP12.84□□□□□ -0.35
SEC16A-206ENST00000431893 SATB1Q01826 763 aa12.84□□□□□ -0.35
SEC16A-206ENST00000431893 SPAG1Q07617 926 aa12.84□□□□□ -0.35
SEC16A-206ENST00000431893 NBPF6Q5VWK0 638 aa12.84□□□□□ -0.35
SEC16A-206ENST00000431893 NBPF5PQ86XG9 351 aaPredicted RBP12.84□□□□□ -0.35
SEC16A-206ENST00000431893 RRP36Q96EU6 259 aaKnown RBP12.84□□□□□ -0.35
SEC16A-206ENST00000431893 NBPF4Q96M43 638 aa12.84□□□□□ -0.35
SEC16A-206ENST00000431893 VEZTQ9HBM0 779 aa12.84□□□□□ -0.35
SEC16A-206ENST00000431893 CCT6BQ92526 530 aa12.84□□□□□ -0.35
SEC16A-206ENST00000431893 NOC4LQ9BVI4 516 aaKnown RBP12.84□□□□□ -0.35
SEC16A-206ENST00000431893 NDUFAB1O14561 156 aa12.84□□□□□ -0.35
SEC16A-206ENST00000431893 SARNPP82979 210 aaKnown RBP12.84□□□□□ -0.35
SEC16A-206ENST00000431893 RAB3GAP1Q15042 981 aa12.84□□□□□ -0.35
SEC16A-206ENST00000431893 KRT79Q5XKE5 535 aa12.84□□□□□ -0.35
SEC16A-206ENST00000431893 BICDL2A1A5D9 508 aa12.84□□□□□ -0.35
SEC16A-206ENST00000431893 KIF3CO14782 793 aa12.84□□□□□ -0.35
SEC16A-206ENST00000431893 RIMBP2O15034 1052 aa12.84□□□□□ -0.35
SEC16A-206ENST00000431893 DISP3Q9P2K9 1392 aa12.84□□□□□ -0.35
SEC16A-206ENST00000431893 SPOPO43791 374 aa12.83□□□□□ -0.35
SEC16A-206ENST00000431893 WDHD1O75717 1129 aaPredicted RBP12.83□□□□□ -0.35
SEC16A-206ENST00000431893 GSTO1P78417 241 aa12.83□□□□□ -0.35
SEC16A-206ENST00000431893 ANKRD13DQ6ZTN6 518 aa12.83□□□□□ -0.35
SEC16A-206ENST00000431893 TSGA10Q9BZW7 698 aa12.83□□□□□ -0.35
SEC16A-206ENST00000431893 TBC1D7Q9P0N9 293 aa12.83□□□□□ -0.35
SEC16A-206ENST00000431893 CAMSAP2Q08AD1 1489 aa12.83□□□□□ -0.35
SEC16A-206ENST00000431893 CCDC152Q4G0S7 254 aa12.83□□□□□ -0.36
SEC16A-206ENST00000431893 MKRN1Q9UHC7 482 aaKnown RBP12.83□□□□□ -0.36
SEC16A-206ENST00000431893 SPDYE3A6NKU9 549 aa12.83□□□□□ -0.36
SEC16A-206ENST00000431893 GMNNO75496 209 aa12.83□□□□□ -0.36
SEC16A-206ENST00000431893 GBP1P32455 592 aa12.83□□□□□ -0.36
SEC16A-206ENST00000431893 C6orf50Q9HD87 102 aa12.83□□□□□ -0.36
SEC16A-206ENST00000431893 USTQ9Y2C2 406 aa12.83□□□□□ -0.36
SEC16A-206ENST00000431893 GOLGA6CA6NDK9 693 aa12.83□□□□□ -0.36
SEC16A-206ENST00000431893 UQCRFS1P1P0C7P4 283 aa12.83□□□□□ -0.36
SEC16A-206ENST00000431893 GOLGA6DP0CG33 693 aa12.83□□□□□ -0.36
SEC16A-206ENST00000431893 PTPROQ16827 1216 aa12.83□□□□□ -0.36
SEC16A-206ENST00000431893 USP37Q86T82 979 aa12.83□□□□□ -0.36
SEC16A-206ENST00000431893 GBP7Q8N8V2 638 aaPredicted RBP12.83□□□□□ -0.36
SEC16A-206ENST00000431893 GOLGA6AQ9NYA3 693 aa12.83□□□□□ -0.36
SEC16A-206ENST00000431893 CDK13Q14004 1512 aaKnown RBP12.83□□□□□ -0.36
SEC16A-206ENST00000431893 INPP5BP32019 993 aa12.83□□□□□ -0.36
SEC16A-206ENST00000431893 TFCP2Q12800 502 aa12.83□□□□□ -0.36
SEC16A-206ENST00000431893 C8orf74Q6P047 294 aa12.83□□□□□ -0.36
SEC16A-206ENST00000431893 LMBR1LQ6UX01 489 aa12.83□□□□□ -0.36
SEC16A-206ENST00000431893 IGSF22Q8N9C0 903 aa12.83□□□□□ -0.36
SEC16A-206ENST00000431893 C8orf58Q8NAV2 365 aa12.83□□□□□ -0.36
SEC16A-206ENST00000431893 CNNM2Q9H8M5 875 aa12.83□□□□□ -0.36
SEC16A-206ENST00000431893 DDX21Q9NR30 783 aaKnown RBP eCLIP12.83□□□□□ -0.36
SEC16A-206ENST00000431893 FRMD3A2A2Y4 597 aa12.82□□□□□ -0.36
SEC16A-206ENST00000431893 RUFY3Q7L099 469 aa12.82□□□□□ -0.36
SEC16A-206ENST00000431893 COPS6Q7L5N1 327 aa12.82□□□□□ -0.36
SEC16A-206ENST00000431893 TSC1Q92574 1164 aa12.82□□□□□ -0.36
SEC16A-206ENST00000431893 JAKMIP2Q96AA8 810 aa12.82□□□□□ -0.36
SEC16A-206ENST00000431893 HAUS7Q99871 368 aa12.82□□□□□ -0.36
SEC16A-206ENST00000431893 EIF6P56537 245 aaKnown RBP12.82□□□□□ -0.36
SEC16A-206ENST00000431893 INF2Q27J81 1249 aa12.82□□□□□ -0.36
SEC16A-206ENST00000431893 LETM2Q2VYF4 491 aa12.82□□□□□ -0.36
SEC16A-206ENST00000431893 DTHD1Q6ZMT9 781 aa12.82□□□□□ -0.36
SEC16A-206ENST00000431893 PNMA8AQ86V59 439 aaPredicted RBP12.82□□□□□ -0.36
SEC16A-206ENST00000431893 KIFC2Q96AC6 838 aa12.82□□□□□ -0.36
SEC16A-206ENST00000431893 NAPGQ99747 312 aaPredicted RBP12.82□□□□□ -0.36
SEC16A-206ENST00000431893 ADGRF5Q8IZF2 1346 aa12.82□□□□□ -0.36
SEC16A-206ENST00000431893 DIXDC1Q155Q3 683 aa12.82□□□□□ -0.36
SEC16A-206ENST00000431893 FYB2Q5VWT5 728 aa12.82□□□□□ -0.36
SEC16A-206ENST00000431893 MCM9Q9NXL9 1143 aa12.82□□□□□ -0.36
SEC16A-206ENST00000431893 EXOC5O00471 708 aa12.82□□□□□ -0.36
SEC16A-206ENST00000431893 ST5P78524 1137 aa12.82□□□□□ -0.36
SEC16A-206ENST00000431893 ANKRD24Q8TF21 1146 aa12.82□□□□□ -0.36
SEC16A-206ENST00000431893 MTUS1Q9ULD2 1270 aa12.82□□□□□ -0.36
SEC16A-206ENST00000431893 TRAF5O00463 557 aa12.82□□□□□ -0.36
SEC16A-206ENST00000431893 TRIM68Q6AZZ1 485 aa12.82□□□□□ -0.36
SEC16A-206ENST00000431893 SLC52A1Q9NWF4 448 aa12.82□□□□□ -0.36
SEC16A-206ENST00000431893 UTP11Q9Y3A2 253 aaKnown RBP12.82□□□□□ -0.36
SEC16A-206ENST00000431893 BIRC3Q13489 604 aa12.81□□□□□ -0.36
SEC16A-206ENST00000431893 FAM135AQ9P2D6 1515 aa12.81□□□□□ -0.36
SEC16A-206ENST00000431893 ALDH3A1P30838 453 aa12.81□□□□□ -0.36
SEC16A-206ENST00000431893 FAM173BQ6P4H8 233 aa12.81□□□□□ -0.36
SEC16A-206ENST00000431893 CCDC110Q8TBZ0 833 aa12.81□□□□□ -0.36
SEC16A-206ENST00000431893 DDX27Q96GQ7 796 aaKnown RBP12.81□□□□□ -0.36
SEC16A-206ENST00000431893 DDX39AO00148 427 aaKnown RBP12.81□□□□□ -0.36
SEC16A-206ENST00000431893 OAS2P29728 719 aaKnown RBP12.81□□□□□ -0.36
SEC16A-206ENST00000431893 CWF19L2Q2TBE0 894 aaKnown RBP12.81□□□□□ -0.36
SEC16A-206ENST00000431893 HINFPQ9BQA5 517 aa12.81□□□□□ -0.36
SEC16A-206ENST00000431893 GPCPD1Q9NPB8 672 aa12.81□□□□□ -0.36
SEC16A-206ENST00000431893 FAM184BQ9ULE4 1060 aa12.81□□□□□ -0.36
SEC16A-206ENST00000431893 CACNA2D3Q8IZS8 1091 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms