RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 POTEIP0CG38 1075 aa21.91■■□□□ 1.1
HMGN1-206ENST00000431390 POTEJP0CG39 1038 aa21.91■■□□□ 1.1
HMGN1-206ENST00000431390 PDE6AP16499 860 aa21.91■■□□□ 1.1
HMGN1-206ENST00000431390 MCCP23508 829 aa21.91■■□□□ 1.1
HMGN1-206ENST00000431390 ZC3H12CQ9C0D7 883 aaKnown RBP21.91■■□□□ 1.1
HMGN1-206ENST00000431390 CCDC171Q6TFL3 1326 aa21.9■■□□□ 1.1
HMGN1-206ENST00000431390 SALL1Q9NSC2 1324 aa21.9■■□□□ 1.1
HMGN1-206ENST00000431390 MAST2Q6P0Q8 1798 aa21.9■■□□□ 1.1
HMGN1-206ENST00000431390 SCN4AP35499 1836 aa21.9■■□□□ 1.1
HMGN1-206ENST00000431390 CHADLQ6NUI6 762 aa21.9■■□□□ 1.1
HMGN1-206ENST00000431390 ZNF589Q86UQ0 364 aaPredicted RBP21.9■■□□□ 1.1
HMGN1-206ENST00000431390 ZGPATQ8N5A5 531 aaKnown RBP21.9■■□□□ 1.1
HMGN1-206ENST00000431390 SEC62Q99442 399 aaKnown RBP21.9■■□□□ 1.1
HMGN1-206ENST00000431390 COA1Q9GZY4 146 aa21.9■■□□□ 1.1
HMGN1-206ENST00000431390 LRP2BPQ9P2M1 347 aa21.9■■□□□ 1.1
HMGN1-206ENST00000431390 TMED8Q6PL24 325 aaPredicted RBP21.89■■□□□ 1.09
HMGN1-206ENST00000431390 SUPT20HQ8NEM7 779 aa21.89■■□□□ 1.09
HMGN1-206ENST00000431390 WDR66Q8TBY9 1149 aa21.89■■□□□ 1.09
HMGN1-206ENST00000431390 MAST3O60307 1309 aa21.89■■□□□ 1.09
HMGN1-206ENST00000431390 TCRBV5S4A2TA0A5A2 114 aa21.88■■□□□ 1.09
HMGN1-206ENST00000431390 CCDC93Q567U6 631 aa21.88■■□□□ 1.09
HMGN1-206ENST00000431390 SOGA3Q5TF21 947 aa21.88■■□□□ 1.09
HMGN1-206ENST00000431390 OSBP2Q969R2 916 aa21.88■■□□□ 1.09
HMGN1-206ENST00000431390 ABCF2Q9UG63 623 aa21.88■■□□□ 1.09
HMGN1-206ENST00000431390 MKRN1Q9UHC7 482 aaKnown RBP21.88■■□□□ 1.09
HMGN1-206ENST00000431390 ZNF532Q9HCE3 1301 aa21.87■■□□□ 1.09
HMGN1-206ENST00000431390 CHAF1AQ13111 956 aaPredicted RBP21.87■■□□□ 1.09
HMGN1-206ENST00000431390 SLFNL1Q499Z3 407 aa21.87■■□□□ 1.09
HMGN1-206ENST00000431390 RTKN2Q8IZC4 609 aa21.87■■□□□ 1.09
HMGN1-206ENST00000431390 MAP4K1Q92918 833 aa21.87■■□□□ 1.09
HMGN1-206ENST00000431390 CREBZFQ9NS37 354 aa21.87■■□□□ 1.09
HMGN1-206ENST00000431390 RIMBP2O15034 1052 aa21.87■■□□□ 1.09
HMGN1-206ENST00000431390 HSPA4P34932 840 aa21.87■■□□□ 1.09
HMGN1-206ENST00000431390 ANAPC15P60006 121 aa21.87■■□□□ 1.09
HMGN1-206ENST00000431390 PTH1RQ03431 593 aa21.87■■□□□ 1.09
HMGN1-206ENST00000431390 SPTY2D1Q68D10 685 aaPredicted RBP21.87■■□□□ 1.09
HMGN1-206ENST00000431390 ERICH6Q7L0X2 663 aa21.87■■□□□ 1.09
HMGN1-206ENST00000431390 MAGEB6Q8N7X4 407 aa21.87■■□□□ 1.09
HMGN1-206ENST00000431390 M0R2C6 588 aa21.86■■□□□ 1.09
HMGN1-206ENST00000431390 CCDC129Q6ZRS4 1044 aa21.86■■□□□ 1.09
HMGN1-206ENST00000431390 RAI14Q9P0K7 980 aa21.86■■□□□ 1.09
HMGN1-206ENST00000431390 FAM205AQ6ZU69 1335 aa21.85■■□□□ 1.09
HMGN1-206ENST00000431390 IL17RAQ96F46 866 aa21.85■■□□□ 1.09
HMGN1-206ENST00000431390 DDRGK1Q96HY6 314 aa21.85■■□□□ 1.09
HMGN1-206ENST00000431390 PSMD1Q99460 953 aa21.85■■□□□ 1.09
HMGN1-206ENST00000431390 KIF2CQ99661 725 aa21.85■■□□□ 1.09
HMGN1-206ENST00000431390 PUS7LQ9H0K6 701 aaKnown RBP21.85■■□□□ 1.09
HMGN1-206ENST00000431390 DSCC1Q9BVC3 393 aa21.84■■□□□ 1.09
HMGN1-206ENST00000431390 TBC1D22AQ8WUA7 517 aa21.83■■□□□ 1.09
HMGN1-206ENST00000431390 RBM8AQ9Y5S9 174 aaKnown RBP21.83■■□□□ 1.09
HMGN1-206ENST00000431390 GPAA1O43292 621 aa21.82■■□□□ 1.08
HMGN1-206ENST00000431390 KIAA2012Q0VF49 1180 aa21.82■■□□□ 1.08
HMGN1-206ENST00000431390 NECTIN1Q15223 517 aa21.82■■□□□ 1.08
HMGN1-206ENST00000431390 PODNQ7Z5L7 613 aa21.82■■□□□ 1.08
HMGN1-206ENST00000431390 U3KPZ7 1027 aaPredicted RBP21.82■■□□□ 1.08
HMGN1-206ENST00000431390 G3V3G9 751 aa21.82■■□□□ 1.08
HMGN1-206ENST00000431390 DCAF8Q5TAQ9 597 aa21.82■■□□□ 1.08
HMGN1-206ENST00000431390 KCNB2Q92953 911 aa21.82■■□□□ 1.08
HMGN1-206ENST00000431390 NSUN4Q96CB9 384 aaKnown RBP21.82■■□□□ 1.08
HMGN1-206ENST00000431390 VPS33BQ9H267 617 aa21.82■■□□□ 1.08
HMGN1-206ENST00000431390 IQCA1LA6NCM1 817 aa21.81■■□□□ 1.08
HMGN1-206ENST00000431390 LDHBP07195 334 aaKnown RBP21.81■■□□□ 1.08
HMGN1-206ENST00000431390 HSPD1P10809 573 aaKnown RBP21.81■■□□□ 1.08
HMGN1-206ENST00000431390 CYP7A1P22680 504 aa21.81■■□□□ 1.08
HMGN1-206ENST00000431390 PRDX5P30044 214 aa21.81■■□□□ 1.08
HMGN1-206ENST00000431390 NAA16Q6N069 864 aaPredicted RBP21.81■■□□□ 1.08
HMGN1-206ENST00000431390 AIDAQ96BJ3 306 aa21.81■■□□□ 1.08
HMGN1-206ENST00000431390 CNTNAP1P78357 1384 aa21.81■■□□□ 1.08
HMGN1-206ENST00000431390 PASKQ96RG2 1323 aa21.8■■□□□ 1.08
HMGN1-206ENST00000431390 MECOMQ03112 1051 aa21.8■■□□□ 1.08
HMGN1-206ENST00000431390 RABEP1Q15276 862 aa21.8■■□□□ 1.08
HMGN1-206ENST00000431390 DOK7Q18PE1 504 aa21.8■■□□□ 1.08
HMGN1-206ENST00000431390 LDHDQ86WU2 507 aa21.8■■□□□ 1.08
HMGN1-206ENST00000431390 L3MBTL3Q96JM7 780 aaPredicted RBP21.8■■□□□ 1.08
HMGN1-206ENST00000431390 TAF1DQ9H5J8 278 aaPredicted RBP21.8■■□□□ 1.08
HMGN1-206ENST00000431390 PALD1Q9ULE6 856 aa21.8■■□□□ 1.08
HMGN1-206ENST00000431390 JAG2Q9Y219 1238 aa21.8■■□□□ 1.08
HMGN1-206ENST00000431390 ADAMTSL1Q8N6G6 1762 aa21.8■■□□□ 1.08
HMGN1-206ENST00000431390 ZNF541Q9H0D2 1346 aa21.8■■□□□ 1.08
HMGN1-206ENST00000431390 RNF20Q5VTR2 975 aa21.79■■□□□ 1.08
HMGN1-206ENST00000431390 ZNF384Q8TF68 577 aa21.79■■□□□ 1.08
HMGN1-206ENST00000431390 SUGT1Q9Y2Z0 365 aa21.79■■□□□ 1.08
HMGN1-206ENST00000431390 GTF2IP78347 998 aa21.78■■□□□ 1.08
HMGN1-206ENST00000431390 MFSD14BQ5SR56 506 aa21.78■■□□□ 1.08
HMGN1-206ENST00000431390 VPS53Q5VIR6 699 aa21.78■■□□□ 1.08
HMGN1-206ENST00000431390 DZIP1Q86YF9 867 aaKnown RBP21.78■■□□□ 1.08
HMGN1-206ENST00000431390 IL27Q8NEV9 243 aa21.78■■□□□ 1.08
HMGN1-206ENST00000431390 STRBPQ96SI9 672 aaKnown RBP21.78■■□□□ 1.08
HMGN1-206ENST00000431390 ZNF277Q9NRM2 450 aaPredicted RBP21.78■■□□□ 1.08
HMGN1-206ENST00000431390 ZNF646O15015 1829 aaPredicted RBP21.78■■□□□ 1.08
HMGN1-206ENST00000431390 FOXN1O15353 648 aa21.78■■□□□ 1.08
HMGN1-206ENST00000431390 PPIP5K2O43314 1243 aa21.78■■□□□ 1.08
HMGN1-206ENST00000431390 ECE2O60344 883 aa21.78■■□□□ 1.08
HMGN1-206ENST00000431390 GNAT2P19087 354 aa21.78■■□□□ 1.08
HMGN1-206ENST00000431390 GSTO1P78417 241 aa21.78■■□□□ 1.08
HMGN1-206ENST00000431390 AOC3Q16853 763 aa21.78■■□□□ 1.08
HMGN1-206ENST00000431390 CREB3L3Q68CJ9 461 aa21.78■■□□□ 1.08
HMGN1-206ENST00000431390 IPO9Q96P70 1041 aaKnown RBP21.78■■□□□ 1.08
HMGN1-206ENST00000431390 DBNDD1Q9H9R9 158 aa21.78■■□□□ 1.08
HMGN1-206ENST00000431390 SNX14Q9Y5W7 946 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms