RNA–Protein interactions for RNA: ENST00000427004.5

PHF1-203, Transcript of PHD finger protein 1, humanhuman

TSL 4

Gene PHF1, Length 609 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-203ENST00000427004 ECHDC1Q9NTX5 307 aa18.79■□□□□ 0.6
PHF1-203ENST00000427004 VEGFAP15692 232 aaPredicted RBP18.78■□□□□ 0.6
PHF1-203ENST00000427004 HSPA6P17066 643 aa18.78■□□□□ 0.6
PHF1-203ENST00000427004 ATP5JP18859 108 aa18.78■□□□□ 0.6
PHF1-203ENST00000427004 RBM5P52756 815 aaKnown RBP eCLIP18.78■□□□□ 0.6
PHF1-203ENST00000427004 PDE1AP54750 535 aa18.78■□□□□ 0.6
PHF1-203ENST00000427004 KIF4BQ2VIQ3 1234 aa18.78■□□□□ 0.6
PHF1-203ENST00000427004 CFAP100Q494V2 611 aa18.78■□□□□ 0.6
PHF1-203ENST00000427004 WDR66Q8TBY9 1149 aa18.78■□□□□ 0.6
PHF1-203ENST00000427004 MYOZ2Q9NPC6 264 aa18.78■□□□□ 0.6
PHF1-203ENST00000427004 PPP4R2Q9NY27 417 aa18.78■□□□□ 0.6
PHF1-203ENST00000427004 RAI14Q9P0K7 980 aa18.78■□□□□ 0.6
PHF1-203ENST00000427004 ZBTB47Q9UFB7 747 aaPredicted RBP18.78■□□□□ 0.6
PHF1-203ENST00000427004 ECM29Q5VYK3 1845 aa18.78■□□□□ 0.6
PHF1-203ENST00000427004 CLRN2A0PK11 232 aa18.77■□□□□ 0.6
PHF1-203ENST00000427004 H7C1D1 291 aa18.77■□□□□ 0.6
PHF1-203ENST00000427004 SEMA3EO15041 775 aa18.77■□□□□ 0.6
PHF1-203ENST00000427004 LDHBP07195 334 aaKnown RBP18.77■□□□□ 0.6
PHF1-203ENST00000427004 RPS12P25398 132 aaKnown RBP18.77■□□□□ 0.6
PHF1-203ENST00000427004 CACNB3P54284 484 aa18.77■□□□□ 0.6
PHF1-203ENST00000427004 MECOMQ03112 1051 aa18.77■□□□□ 0.6
PHF1-203ENST00000427004 ADGRA1Q86SQ6 560 aa18.77■□□□□ 0.6
PHF1-203ENST00000427004 DPF2Q92785 391 aa18.77■□□□□ 0.6
PHF1-203ENST00000427004 CLEC11AQ9Y240 323 aa18.77■□□□□ 0.6
PHF1-203ENST00000427004 AK9Q5TCS8 1911 aa18.76■□□□□ 0.59
PHF1-203ENST00000427004 IDH1O75874 414 aaKnown RBP18.76■□□□□ 0.59
PHF1-203ENST00000427004 CRKP46108 304 aa18.76■□□□□ 0.59
PHF1-203ENST00000427004 ZNF280AP59817 542 aaPredicted RBP18.76■□□□□ 0.59
PHF1-203ENST00000427004 MAP1SQ66K74 1059 aaPredicted RBP18.76■□□□□ 0.59
PHF1-203ENST00000427004 ZNF512BQ96KM6 892 aaPredicted RBP18.76■□□□□ 0.59
PHF1-203ENST00000427004 PRMT6Q96LA8 375 aaPredicted RBP18.76■□□□□ 0.59
PHF1-203ENST00000427004 ADARB2Q9NS39 739 aaKnown RBP18.76■□□□□ 0.59
PHF1-203ENST00000427004 CDK5RAP2Q96SN8 1893 aa18.75■□□□□ 0.59
PHF1-203ENST00000427004 RGS3P49796 1198 aa18.75■□□□□ 0.59
PHF1-203ENST00000427004 ERICH6Q7L0X2 663 aa18.75■□□□□ 0.59
PHF1-203ENST00000427004 TBC1D22AQ8WUA7 517 aa18.75■□□□□ 0.59
PHF1-203ENST00000427004 HAUS7Q99871 368 aa18.75■□□□□ 0.59
PHF1-203ENST00000427004 PAG1Q9NWQ8 432 aa18.75■□□□□ 0.59
PHF1-203ENST00000427004 LRP2BPQ9P2M1 347 aa18.75■□□□□ 0.59
PHF1-203ENST00000427004 MYO3BQ8WXR4 1341 aa18.74■□□□□ 0.59
PHF1-203ENST00000427004 SALL1Q9NSC2 1324 aa18.74■□□□□ 0.59
PHF1-203ENST00000427004 WNT10BO00744 389 aa18.74■□□□□ 0.59
PHF1-203ENST00000427004 FKBP1AP62942 108 aaKnown RBP18.74■□□□□ 0.59
PHF1-203ENST00000427004 PRAMEF18Q5VWM3 479 aa18.74■□□□□ 0.59
PHF1-203ENST00000427004 CENPQQ7L2Z9 268 aaPredicted RBP18.74■□□□□ 0.59
PHF1-203ENST00000427004 NSUN4Q96CB9 384 aaKnown RBP18.74■□□□□ 0.59
PHF1-203ENST00000427004 ZBED3Q96IU2 234 aaPredicted RBP18.74■□□□□ 0.59
PHF1-203ENST00000427004 TDRD3Q9H7E2 651 aaKnown RBP18.74■□□□□ 0.59
PHF1-203ENST00000427004 DAGLAQ9Y4D2 1042 aa18.74■□□□□ 0.59
PHF1-203ENST00000427004 IQCA1LA6NCM1 817 aa18.73■□□□□ 0.59
PHF1-203ENST00000427004 ADM5C9JUS6 153 aa18.73■□□□□ 0.59
PHF1-203ENST00000427004 DYNLL1P63167 89 aaKnown RBP18.73■□□□□ 0.59
PHF1-203ENST00000427004 ANGEL2Q5VTE6 544 aaKnown RBP18.73■□□□□ 0.59
PHF1-203ENST00000427004 DZIP1Q86YF9 867 aaKnown RBP18.73■□□□□ 0.59
PHF1-203ENST00000427004 MAGEB6Q8N7X4 407 aa18.73■□□□□ 0.59
PHF1-203ENST00000427004 GGA3Q9NZ52 723 aa18.73■□□□□ 0.59
PHF1-203ENST00000427004 STAP2Q9UGK3 403 aa18.73■□□□□ 0.59
PHF1-203ENST00000427004 PDS5AQ29RF7 1337 aaKnown RBP18.73■□□□□ 0.59
PHF1-203ENST00000427004 TRAF5O00463 557 aa18.72■□□□□ 0.59
PHF1-203ENST00000427004 DLGAP5Q15398 846 aa18.72■□□□□ 0.59
PHF1-203ENST00000427004 OGFOD1Q8N543 542 aa18.72■□□□□ 0.59
PHF1-203ENST00000427004 MIGA1Q8NAN2 632 aa18.72■□□□□ 0.59
PHF1-203ENST00000427004 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.72■□□□□ 0.59
PHF1-203ENST00000427004 GLIS2Q9BZE0 524 aaPredicted RBP18.72■□□□□ 0.59
PHF1-203ENST00000427004 HDAC9Q9UKV0 1011 aa18.72■□□□□ 0.59
PHF1-203ENST00000427004 TTC41PQ6P2S7 1318 aa18.72■□□□□ 0.59
PHF1-203ENST00000427004 SPDYE2BA6NHP3 402 aa18.71■□□□□ 0.59
PHF1-203ENST00000427004 SPDYE6P0CI01 402 aa18.71■□□□□ 0.59
PHF1-203ENST00000427004 GSPT1P15170 499 aaKnown RBP18.71■□□□□ 0.59
PHF1-203ENST00000427004 APOBEC3HQ6NTF7 200 aaKnown RBP18.71■□□□□ 0.59
PHF1-203ENST00000427004 CDAN1Q8IWY9 1227 aa18.71■□□□□ 0.59
PHF1-203ENST00000427004 GPATCH3Q96I76 525 aa18.71■□□□□ 0.59
PHF1-203ENST00000427004 CYP7A1P22680 504 aa18.7■□□□□ 0.58
PHF1-203ENST00000427004 USP50Q70EL3 339 aaPredicted RBP18.7■□□□□ 0.58
PHF1-203ENST00000427004 TEKT1Q969V4 418 aa18.7■□□□□ 0.58
PHF1-203ENST00000427004 VEZTQ9HBM0 779 aa18.7■□□□□ 0.58
PHF1-203ENST00000427004 FZD1Q9UP38 647 aa18.7■□□□□ 0.58
PHF1-203ENST00000427004 GTF3C3Q9Y5Q9 886 aa18.7■□□□□ 0.58
PHF1-203ENST00000427004 TCP10L2B9ZVM9 353 aa18.69■□□□□ 0.58
PHF1-203ENST00000427004 GLRX3O76003 335 aaKnown RBP18.69■□□□□ 0.58
PHF1-203ENST00000427004 SLURP2P0DP57 97 aa18.69■□□□□ 0.58
PHF1-203ENST00000427004 PDE6AP16499 860 aa18.69■□□□□ 0.58
PHF1-203ENST00000427004 BTDP43251 543 aa18.69■□□□□ 0.58
PHF1-203ENST00000427004 NAA16Q6N069 864 aaPredicted RBP18.69■□□□□ 0.58
PHF1-203ENST00000427004 USP48Q86UV5 1035 aa18.69■□□□□ 0.58
PHF1-203ENST00000427004 AATFQ9NY61 560 aaKnown RBP eCLIP18.69■□□□□ 0.58
PHF1-203ENST00000427004 ZNF70Q9UC06 446 aaPredicted RBP18.69■□□□□ 0.58
PHF1-203ENST00000427004 MROH7-TTC4A0A0A0MT08 1334 aa18.69■□□□□ 0.58
PHF1-203ENST00000427004 ZNF532Q9HCE3 1301 aa18.69■□□□□ 0.58
PHF1-203ENST00000427004 TOMM70O94826 608 aa18.68■□□□□ 0.58
PHF1-203ENST00000427004 NFIAQ12857 509 aa18.68■□□□□ 0.58
PHF1-203ENST00000427004 SPTY2D1Q68D10 685 aaPredicted RBP18.68■□□□□ 0.58
PHF1-203ENST00000427004 CDC42EP5Q6NZY7 148 aa18.68■□□□□ 0.58
PHF1-203ENST00000427004 ZGPATQ8N5A5 531 aaKnown RBP18.68■□□□□ 0.58
PHF1-203ENST00000427004 RILPL2Q969X0 211 aa18.68■□□□□ 0.58
PHF1-203ENST00000427004 SEC62Q99442 399 aaKnown RBP18.68■□□□□ 0.58
PHF1-203ENST00000427004 SERPINA10Q9UK55 444 aa18.68■□□□□ 0.58
PHF1-203ENST00000427004 TCRBV5S4A2TA0A5A2 114 aa18.67■□□□□ 0.58
PHF1-203ENST00000427004 TRIM6-TRIM34B2RNG4 842 aa18.67■□□□□ 0.58
PHF1-203ENST00000427004 ERC2O15083 957 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms