RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 TOMM70O94826 608 aa29.86■■■□□ 2.37
VEGFA-209ENST00000425836 CFAP100Q494V2 611 aa29.86■■■□□ 2.37
VEGFA-209ENST00000425836 ERICH6BQ5W0A0 696 aa29.86■■■□□ 2.37
VEGFA-209ENST00000425836 ZBED3Q96IU2 234 aaPredicted RBP29.86■■■□□ 2.37
VEGFA-209ENST00000425836 MRIQ9BWK5 157 aa29.86■■■□□ 2.37
VEGFA-209ENST00000425836 CLEC11AQ9Y240 323 aa29.86■■■□□ 2.37
VEGFA-209ENST00000425836 PCDHAC2Q9Y5I4 1007 aa29.86■■■□□ 2.37
VEGFA-209ENST00000425836 MX1P20591 662 aa29.85■■■□□ 2.37
VEGFA-209ENST00000425836 HDLBPQ00341 1268 aaKnown RBP29.85■■■□□ 2.37
VEGFA-209ENST00000425836 ERICH6Q7L0X2 663 aa29.85■■■□□ 2.37
VEGFA-209ENST00000425836 MTMR14Q8NCE2 650 aa29.85■■■□□ 2.37
VEGFA-209ENST00000425836 PIH1D3Q9NQM4 214 aaKnown RBP29.85■■■□□ 2.37
VEGFA-209ENST00000425836 MAST3O60307 1309 aa29.84■■■□□ 2.37
VEGFA-209ENST00000425836 WNT10BO00744 389 aa29.84■■■□□ 2.37
VEGFA-209ENST00000425836 CRKP46108 304 aa29.84■■■□□ 2.37
VEGFA-209ENST00000425836 DLGAP5Q15398 846 aa29.84■■■□□ 2.37
VEGFA-209ENST00000425836 NBPF9Q3BBW0 867 aa29.84■■■□□ 2.37
VEGFA-209ENST00000425836 HAUS7Q99871 368 aa29.84■■■□□ 2.37
VEGFA-209ENST00000425836 ANTXR1Q9H6X2 564 aa29.84■■■□□ 2.37
VEGFA-209ENST00000425836 TTC41PQ6P2S7 1318 aa29.83■■■□□ 2.37
VEGFA-209ENST00000425836 RBM5P52756 815 aaKnown RBP eCLIP29.83■■■□□ 2.371e-9■□□□□ 9.1
VEGFA-209ENST00000425836 ZC3H15Q8WU90 426 aaKnown RBP29.83■■■□□ 2.37
VEGFA-209ENST00000425836 DNAJC2Q99543 621 aaKnown RBP29.83■■■□□ 2.37
VEGFA-209ENST00000425836 LRP2BPQ9P2M1 347 aa29.83■■■□□ 2.37
VEGFA-209ENST00000425836 PGAP2Q9UHJ9 254 aa29.83■■■□□ 2.37
VEGFA-209ENST00000425836 RBM46Q8TBY0 533 aaKnown RBP29.82■■■□□ 2.36
VEGFA-209ENST00000425836 TEKT1Q969V4 418 aa29.82■■■□□ 2.36
VEGFA-209ENST00000425836 CCDC136Q96JN2 1154 aa29.82■■■□□ 2.36
VEGFA-209ENST00000425836 ASTN2O75129 1339 aaPredicted RBP29.82■■■□□ 2.36
VEGFA-209ENST00000425836 DIXDC1Q155Q3 683 aa29.81■■■□□ 2.36
VEGFA-209ENST00000425836 DZIP1Q86YF9 867 aaKnown RBP29.81■■■□□ 2.36
VEGFA-209ENST00000425836 PRMT6Q96LA8 375 aaPredicted RBP29.81■■■□□ 2.36
VEGFA-209ENST00000425836 RAI14Q9P0K7 980 aa29.81■■■□□ 2.36
VEGFA-209ENST00000425836 STAP2Q9UGK3 403 aa29.81■■■□□ 2.36
VEGFA-209ENST00000425836 MYH13Q9UKX3 1938 aa29.81■■■□□ 2.36
VEGFA-209ENST00000425836 SPDYE2BA6NHP3 402 aa29.81■■■□□ 2.36
VEGFA-209ENST00000425836 SPDYE6P0CI01 402 aa29.81■■■□□ 2.36
VEGFA-209ENST00000425836 MECOMQ03112 1051 aa29.81■■■□□ 2.36
VEGFA-209ENST00000425836 CHADLQ6NUI6 762 aa29.81■■■□□ 2.36
VEGFA-209ENST00000425836 HHIPL2Q6UWX4 724 aa29.81■■■□□ 2.36
VEGFA-209ENST00000425836 PI4K2BQ8TCG2 481 aa29.81■■■□□ 2.36
VEGFA-209ENST00000425836 ZNF384Q8TF68 577 aa29.81■■■□□ 2.36
VEGFA-209ENST00000425836 EDC3Q96F86 508 aaKnown RBP29.81■■■□□ 2.36
VEGFA-209ENST00000425836 AKAP11Q9UKA4 1901 aa29.81■■■□□ 2.36
VEGFA-209ENST00000425836 GOLIM4O00461 696 aa29.8■■■□□ 2.36
VEGFA-209ENST00000425836 PDE1AP54750 535 aa29.8■■■□□ 2.36
VEGFA-209ENST00000425836 CENPQQ7L2Z9 268 aaPredicted RBP29.8■■■□□ 2.36
VEGFA-209ENST00000425836 NSUN4Q96CB9 384 aaKnown RBP29.8■■■□□ 2.36
VEGFA-209ENST00000425836 ZDHHC15Q96MV8 337 aa29.79■■■□□ 2.36
VEGFA-209ENST00000425836 PAG1Q9NWQ8 432 aa29.79■■■□□ 2.36
VEGFA-209ENST00000425836 ERC2O15083 957 aa29.78■■■□□ 2.36
VEGFA-209ENST00000425836 TTF1Q15361 905 aaPredicted RBP29.78■■■□□ 2.36
VEGFA-209ENST00000425836 MAP1SQ66K74 1059 aaPredicted RBP29.78■■■□□ 2.36
VEGFA-209ENST00000425836 SMC1BQ8NDV3 1235 aa29.78■■■□□ 2.36
VEGFA-209ENST00000425836 AOX1Q06278 1338 aa29.78■■■□□ 2.36
VEGFA-209ENST00000425836 ADAMTSL1Q8N6G6 1762 aa29.78■■■□□ 2.36
VEGFA-209ENST00000425836 GLRX3O76003 335 aaKnown RBP29.77■■■□□ 2.36
VEGFA-209ENST00000425836 APOBEC3HQ6NTF7 200 aaKnown RBP29.77■■■□□ 2.36
VEGFA-209ENST00000425836 GGA3Q9NZ52 723 aa29.77■■■□□ 2.36
VEGFA-209ENST00000425836 DAGLAQ9Y4D2 1042 aa29.77■■■□□ 2.36
VEGFA-209ENST00000425836 IDH1O75874 414 aaKnown RBP29.77■■■□□ 2.36
VEGFA-209ENST00000425836 ANGEL2Q5VTE6 544 aaKnown RBP29.77■■■□□ 2.36
VEGFA-209ENST00000425836 PLEKHM2Q8IWE5 1019 aa29.77■■■□□ 2.36
VEGFA-209ENST00000425836 FAM163AQ96GL9 167 aaPredicted RBP29.77■■■□□ 2.36
VEGFA-209ENST00000425836 PPP4R2Q9NY27 417 aa29.77■■■□□ 2.36
VEGFA-209ENST00000425836 IGSF3O75054 1194 aa29.76■■■□□ 2.35
VEGFA-209ENST00000425836 SLF2Q8IX21 1173 aa29.76■■■□□ 2.35
VEGFA-209ENST00000425836 PDE4AP27815 886 aa29.75■■■□□ 2.35
VEGFA-209ENST00000425836 CNTROBQ8N137 903 aa29.75■■■□□ 2.35
VEGFA-209ENST00000425836 GAKO14976 1311 aa29.75■■■□□ 2.35
VEGFA-209ENST00000425836 GSTO1P78417 241 aa29.74■■■□□ 2.35
VEGFA-209ENST00000425836 FSTL1Q12841 308 aa29.74■■■□□ 2.35
VEGFA-209ENST00000425836 DCPSQ96C86 337 aaKnown RBP29.74■■■□□ 2.35
VEGFA-209ENST00000425836 TDRD3Q9H7E2 651 aaKnown RBP29.74■■■□□ 2.35
VEGFA-209ENST00000425836 MYO1BO43795 1136 aa29.73■■■□□ 2.35
VEGFA-209ENST00000425836 MAP3K12Q12852 859 aa29.73■■■□□ 2.35
VEGFA-209ENST00000425836 NAA16Q6N069 864 aaPredicted RBP29.73■■■□□ 2.35
VEGFA-209ENST00000425836 MROH7-TTC4A0A0A0MT08 1334 aa29.73■■■□□ 2.35
VEGFA-209ENST00000425836 CLRN2A0PK11 232 aa29.73■■■□□ 2.35
VEGFA-209ENST00000425836 LDHCP07864 332 aa29.73■■■□□ 2.35
VEGFA-209ENST00000425836 OSBPL3Q9H4L5 887 aa29.73■■■□□ 2.35
VEGFA-209ENST00000425836 PITPNM2Q9BZ72 1349 aa29.72■■■□□ 2.35
VEGFA-209ENST00000425836 ITGBL1O95965 494 aaPredicted RBP29.72■■■□□ 2.35
VEGFA-209ENST00000425836 SPDYE2Q495Y8 402 aa29.72■■■□□ 2.35
VEGFA-209ENST00000425836 ZNF70Q9UC06 446 aaPredicted RBP29.72■■■□□ 2.35
VEGFA-209ENST00000425836 MAP4K4O95819 1239 aaPredicted RBP29.71■■■□□ 2.35
VEGFA-209ENST00000425836 CDC37L1Q7L3B6 337 aa29.71■■■□□ 2.35
VEGFA-209ENST00000425836 GLIS2Q9BZE0 524 aaPredicted RBP29.71■■■□□ 2.35
VEGFA-209ENST00000425836 KRT26Q7Z3Y9 468 aa29.7■■■□□ 2.35
VEGFA-209ENST00000425836 USP48Q86UV5 1035 aa29.7■■■□□ 2.35
VEGFA-209ENST00000425836 MAGEB6Q8N7X4 407 aa29.7■■■□□ 2.35
VEGFA-209ENST00000425836 SCAF8Q9UPN6 1271 aaKnown RBP29.7■■■□□ 2.35
VEGFA-209ENST00000425836 GPR75-ASB3A0A0A6YYF3 556 aa29.69■■■□□ 2.34
VEGFA-209ENST00000425836 CDC42EP5Q6NZY7 148 aa29.69■■■□□ 2.34
VEGFA-209ENST00000425836 ADGRA1Q86SQ6 560 aa29.69■■■□□ 2.34
VEGFA-209ENST00000425836 CYP7A1P22680 504 aa29.69■■■□□ 2.34
VEGFA-209ENST00000425836 BTDP43251 543 aa29.69■■■□□ 2.34
VEGFA-209ENST00000425836 SLC9C2Q5TAH2 1124 aa29.69■■■□□ 2.34
VEGFA-209ENST00000425836 SULF1Q8IWU6 871 aa29.69■■■□□ 2.34
VEGFA-209ENST00000425836 VEZTQ9HBM0 779 aa29.69■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms