RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 ZNF804AQ7Z570 1209 aa18.07■□□□□ 0.48
ACTB-204ENST00000425660 MASTLQ96GX5 879 aa18.07■□□□□ 0.48
ACTB-204ENST00000425660 UFL1O94874 794 aa18.06■□□□□ 0.48
ACTB-204ENST00000425660 EXOSC10Q01780 885 aaKnown RBP18.06■□□□□ 0.48
ACTB-204ENST00000425660 ADGRA1Q86SQ6 560 aa18.06■□□□□ 0.48
ACTB-204ENST00000425660 FBXL16Q8N461 479 aa18.06■□□□□ 0.48
ACTB-204ENST00000425660 TBC1D16Q8TBP0 767 aa18.06■□□□□ 0.48
ACTB-204ENST00000425660 ZNF384Q8TF68 577 aa18.06■□□□□ 0.48
ACTB-204ENST00000425660 AGXT2Q9BYV1 514 aa18.06■□□□□ 0.48
ACTB-204ENST00000425660 PDGFDQ9GZP0 370 aaPredicted RBP18.06■□□□□ 0.48
ACTB-204ENST00000425660 RAI14Q9P0K7 980 aa18.06■□□□□ 0.48
ACTB-204ENST00000425660 TPCN1Q9ULQ1 816 aa18.06■□□□□ 0.48
ACTB-204ENST00000425660 COL11A2P13942 1736 aaPredicted RBP18.06■□□□□ 0.48
ACTB-204ENST00000425660 ZNF213O14771 459 aa18.05■□□□□ 0.48
ACTB-204ENST00000425660 CYP7A1P22680 504 aa18.05■□□□□ 0.48
ACTB-204ENST00000425660 NSUN4Q96CB9 384 aaKnown RBP18.05■□□□□ 0.48
ACTB-204ENST00000425660 POLLQ9UGP5 575 aa18.05■□□□□ 0.48
ACTB-204ENST00000425660 MYH13Q9UKX3 1938 aa18.05■□□□□ 0.48
ACTB-204ENST00000425660 LARGE1O95461 756 aa18.05■□□□□ 0.48
ACTB-204ENST00000425660 IL1R1P14778 569 aa18.05■□□□□ 0.48
ACTB-204ENST00000425660 ME3Q16798 604 aa18.05■□□□□ 0.48
ACTB-204ENST00000425660 LCORLQ8N3X6 602 aa18.05■□□□□ 0.48
ACTB-204ENST00000425660 TCEANC2Q96MN5 208 aa18.05■□□□□ 0.48
ACTB-204ENST00000425660 RIOK1Q9BRS2 568 aaKnown RBP18.05■□□□□ 0.48
ACTB-204ENST00000425660 ARMT1Q9H993 441 aa18.05■□□□□ 0.48
ACTB-204ENST00000425660 GSG1L2A8MUP6 293 aa18.04■□□□□ 0.48
ACTB-204ENST00000425660 CLEC17AQ6ZS10 378 aa18.04■□□□□ 0.48
ACTB-204ENST00000425660 WDR66Q8TBY9 1149 aa18.04■□□□□ 0.48
ACTB-204ENST00000425660 TNPO1Q92973 898 aaKnown RBP18.04■□□□□ 0.48
ACTB-204ENST00000425660 LARP6Q9BRS8 491 aaKnown RBP18.04■□□□□ 0.48
ACTB-204ENST00000425660 EPB41L4AQ9HCS5 686 aaPredicted RBP18.04■□□□□ 0.48
ACTB-204ENST00000425660 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.04■□□□□ 0.48
ACTB-204ENST00000425660 NAA16Q6N069 864 aaPredicted RBP18.03■□□□□ 0.48
ACTB-204ENST00000425660 IFNL3Q8IZI9 196 aa18.03■□□□□ 0.48
ACTB-204ENST00000425660 NBPF3Q9H094 633 aa18.03■□□□□ 0.48
ACTB-204ENST00000425660 CD209Q9NNX6 404 aa18.03■□□□□ 0.48
ACTB-204ENST00000425660 APPP05067 770 aa18.02■□□□□ 0.48
ACTB-204ENST00000425660 PRDX5P30044 214 aa18.02■□□□□ 0.48
ACTB-204ENST00000425660 HAND2P61296 217 aa18.02■□□□□ 0.48
ACTB-204ENST00000425660 MECOMQ03112 1051 aa18.02■□□□□ 0.48
ACTB-204ENST00000425660 ST3GAL1Q11201 340 aa18.02■□□□□ 0.48
ACTB-204ENST00000425660 SPTY2D1Q68D10 685 aaPredicted RBP18.02■□□□□ 0.48
ACTB-204ENST00000425660 STYK1Q6J9G0 422 aa18.02■□□□□ 0.48
ACTB-204ENST00000425660 MIGA1Q8NAN2 632 aa18.02■□□□□ 0.48
ACTB-204ENST00000425660 DUOX1Q9NRD9 1551 aa18.02■□□□□ 0.48
ACTB-204ENST00000425660 MAST2Q6P0Q8 1798 aa18.02■□□□□ 0.48
ACTB-204ENST00000425660 MAGEB6P1A0A0J9YX57 407 aa18.02■□□□□ 0.47
ACTB-204ENST00000425660 CHAF1AQ13111 956 aaPredicted RBP18.02■□□□□ 0.47
ACTB-204ENST00000425660 PKP1Q13835 747 aa18.02■□□□□ 0.47
ACTB-204ENST00000425660 Q6ZUG5 572 aa18.02■□□□□ 0.47
ACTB-204ENST00000425660 NACAP1Q9BZK3 213 aa18.02■□□□□ 0.47
ACTB-204ENST00000425660 WDR19Q8NEZ3 1342 aa18.02■□□□□ 0.47
ACTB-204ENST00000425660 LAMA4Q16363 1823 aa18.02■□□□□ 0.47
ACTB-204ENST00000425660 MB21D2Q8IYB1 491 aaPredicted RBP18.01■□□□□ 0.47
ACTB-204ENST00000425660 GPR101Q96P66 508 aaPredicted RBP18.01■□□□□ 0.47
ACTB-204ENST00000425660 NAPBQ9H115 298 aa18.01■□□□□ 0.47
ACTB-204ENST00000425660 SLC4A4Q9Y6R1 1079 aa18.01■□□□□ 0.47
ACTB-204ENST00000425660 C2CD5Q86YS7 1000 aa18■□□□□ 0.47
ACTB-204ENST00000425660 NCOA7Q8NI08 942 aa18■□□□□ 0.47
ACTB-204ENST00000425660 SLC16A10Q8TF71 515 aa18■□□□□ 0.47
ACTB-204ENST00000425660 ZDHHC9Q9Y397 364 aa18■□□□□ 0.47
ACTB-204ENST00000425660 H0YIN7 160 aa18■□□□□ 0.47
ACTB-204ENST00000425660 PRKAB2O43741 272 aa18■□□□□ 0.47
ACTB-204ENST00000425660 MCM4P33991 863 aa18■□□□□ 0.47
ACTB-204ENST00000425660 EVCP57679 992 aa18■□□□□ 0.47
ACTB-204ENST00000425660 TBC1D10CQ8IV04 446 aa18■□□□□ 0.47
ACTB-204ENST00000425660 KIAA1551Q9HCM1 1747 aa18■□□□□ 0.47
ACTB-204ENST00000425660 TIAM2Q8IVF5 1701 aa17.99■□□□□ 0.47
ACTB-204ENST00000425660 CCDC83Q8IWF9 413 aa17.99■□□□□ 0.47
ACTB-204ENST00000425660 MPNDQ8N594 471 aa17.99■□□□□ 0.47
ACTB-204ENST00000425660 BRF1Q92994 677 aa17.99■□□□□ 0.47
ACTB-204ENST00000425660 C6orf229H3BNL8 230 aa17.98■□□□□ 0.47
ACTB-204ENST00000425660 BRD1O95696 1058 aa17.98■□□□□ 0.47
ACTB-204ENST00000425660 MCM5P33992 734 aa17.98■□□□□ 0.47
ACTB-204ENST00000425660 GIMAP6Q6P9H5 292 aa17.98■□□□□ 0.47
ACTB-204ENST00000425660 GBP4Q96PP9 640 aa17.98■□□□□ 0.47
ACTB-204ENST00000425660 C10orf71Q711Q0 1435 aa17.98■□□□□ 0.47
ACTB-204ENST00000425660 PSDA5PKW4 1024 aaPredicted RBP17.98■□□□□ 0.47
ACTB-204ENST00000425660 LDHBP07195 334 aaKnown RBP17.98■□□□□ 0.47
ACTB-204ENST00000425660 RALYLQ86SE5 291 aaKnown RBP17.98■□□□□ 0.47
ACTB-204ENST00000425660 GTF3C6Q969F1 213 aa17.98■□□□□ 0.47
ACTB-204ENST00000425660 COA1Q9GZY4 146 aa17.98■□□□□ 0.47
ACTB-204ENST00000425660 FAM205AQ6ZU69 1335 aa17.97■□□□□ 0.47
ACTB-204ENST00000425660 TDO2P48775 406 aa17.97■□□□□ 0.47
ACTB-204ENST00000425660 TRDNQ13061 729 aa17.97■□□□□ 0.47
ACTB-204ENST00000425660 R3HDM1Q15032 1099 aaKnown RBP17.97■□□□□ 0.47
ACTB-204ENST00000425660 DPP8Q6V1X1 898 aaPredicted RBP17.97■□□□□ 0.47
ACTB-204ENST00000425660 DZIP1Q86YF9 867 aaKnown RBP17.97■□□□□ 0.47
ACTB-204ENST00000425660 NECAB1Q8N987 351 aa17.97■□□□□ 0.47
ACTB-204ENST00000425660 ZNF622Q969S3 477 aaKnown RBP eCLIP17.97■□□□□ 0.47
ACTB-204ENST00000425660 LRRC2Q9BYS8 371 aa17.97■□□□□ 0.47
ACTB-204ENST00000425660 TMX4Q9H1E5 349 aaPredicted RBP17.97■□□□□ 0.47
ACTB-204ENST00000425660 ANAPC4Q9UJX5 808 aa17.97■□□□□ 0.47
ACTB-204ENST00000425660 SMC3Q9UQE7 1217 aa17.97■□□□□ 0.47
ACTB-204ENST00000425660 JAG2Q9Y219 1238 aa17.97■□□□□ 0.47
ACTB-204ENST00000425660 ANTXR2P58335 489 aa17.96■□□□□ 0.47
ACTB-204ENST00000425660 FGD1P98174 961 aa17.96■□□□□ 0.47
ACTB-204ENST00000425660 OLFM4Q6UX06 510 aa17.96■□□□□ 0.47
ACTB-204ENST00000425660 TBC1D22AQ8WUA7 517 aa17.96■□□□□ 0.47
ACTB-204ENST00000425660 SDR42E1Q8WUS8 393 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms