RNA–Protein interactions for RNA: ENST00000423368.6

CNOT4-205, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT4, Length 3,297 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-205ENST00000423368 FAM135AQ9P2D6 1515 aa7.78□□□□□ -1.16
CNOT4-205ENST00000423368 PDHA1P08559 390 aa7.77□□□□□ -1.16
CNOT4-205ENST00000423368 KRT24Q2M2I5 525 aa7.77□□□□□ -1.16
CNOT4-205ENST00000423368 CYB5D1Q6P9G0 228 aa7.77□□□□□ -1.16
CNOT4-205ENST00000423368 DDX46Q7L014 1031 aaKnown RBP7.77□□□□□ -1.16
CNOT4-205ENST00000423368 ELOA2Q8IYF1 753 aaPredicted RBP7.77□□□□□ -1.16
CNOT4-205ENST00000423368 CAPZA3Q96KX2 299 aa7.77□□□□□ -1.16
CNOT4-205ENST00000423368 GBP3Q9H0R5 595 aa7.77□□□□□ -1.16
CNOT4-205ENST00000423368 SIL1Q9H173 461 aa7.77□□□□□ -1.16
CNOT4-205ENST00000423368 RPAP1Q9BWH6 1393 aaPredicted RBP7.77□□□□□ -1.17
CNOT4-205ENST00000423368 ARHGAP31Q2M1Z3 1444 aa7.77□□□□□ -1.17
CNOT4-205ENST00000423368 SYF2O95926 243 aaKnown RBP7.77□□□□□ -1.17
CNOT4-205ENST00000423368 SERPINC1P01008 464 aa7.77□□□□□ -1.17
CNOT4-205ENST00000423368 NEFHP12036 1026 aa7.77□□□□□ -1.17
CNOT4-205ENST00000423368 FNTAP49354 379 aa7.77□□□□□ -1.17
CNOT4-205ENST00000423368 CAMK2BQ13554 666 aa7.77□□□□□ -1.17
CNOT4-205ENST00000423368 CUL4AQ13619 759 aa7.77□□□□□ -1.17
CNOT4-205ENST00000423368 MTF1Q14872 753 aa7.77□□□□□ -1.17
CNOT4-205ENST00000423368 TOGARAM2Q6ZUX3 1019 aa7.77□□□□□ -1.17
CNOT4-205ENST00000423368 ARHGAP22Q7Z5H3 698 aa7.77□□□□□ -1.17
CNOT4-205ENST00000423368 FAM163AQ96GL9 167 aaPredicted RBP7.77□□□□□ -1.17
CNOT4-205ENST00000423368 SPAG5Q96R06 1193 aa7.77□□□□□ -1.17
CNOT4-205ENST00000423368 PPANQ9NQ55 473 aaKnown RBP7.77□□□□□ -1.17
CNOT4-205ENST00000423368 FANCLQ9NW38 375 aa7.77□□□□□ -1.17
CNOT4-205ENST00000423368 MTMR6Q9Y217 621 aa7.77□□□□□ -1.17
CNOT4-205ENST00000423368 MEFVO15553 781 aaPredicted RBP7.77□□□□□ -1.17
CNOT4-205ENST00000423368 MAP3K13O43283 966 aa7.77□□□□□ -1.17
CNOT4-205ENST00000423368 DIAPH2O60879 1101 aa7.77□□□□□ -1.17
CNOT4-205ENST00000423368 GUCY1A3Q02108 690 aa7.77□□□□□ -1.17
CNOT4-205ENST00000423368 IQCB1Q15051 598 aa7.77□□□□□ -1.17
CNOT4-205ENST00000423368 BRD3Q15059 726 aa7.77□□□□□ -1.17
CNOT4-205ENST00000423368 SPRED3Q2MJR0 410 aa7.77□□□□□ -1.17
CNOT4-205ENST00000423368 NCAPH2Q6IBW4 605 aa7.77□□□□□ -1.17
CNOT4-205ENST00000423368 C16orf87Q6PH81 154 aa7.77□□□□□ -1.17
CNOT4-205ENST00000423368 TRIML1Q8N9V2 468 aa7.77□□□□□ -1.17
CNOT4-205ENST00000423368 FAM81AQ8TBF8 368 aa7.77□□□□□ -1.17
CNOT4-205ENST00000423368 RGL1Q9NZL6 768 aa7.77□□□□□ -1.17
CNOT4-205ENST00000423368 PPP2R2CQ9Y2T4 447 aa7.77□□□□□ -1.17
CNOT4-205ENST00000423368 USH1CQ9Y6N9 552 aa7.77□□□□□ -1.17
CNOT4-205ENST00000423368 PPIP5K1Q6PFW1 1433 aa7.76□□□□□ -1.17
CNOT4-205ENST00000423368 VWA3AA6NCI4 1184 aa7.76□□□□□ -1.17
CNOT4-205ENST00000423368 GSDMDP57764 484 aa7.76□□□□□ -1.17
CNOT4-205ENST00000423368 DIXDC1Q155Q3 683 aa7.76□□□□□ -1.17
CNOT4-205ENST00000423368 HSP90AB2PQ58FF8 381 aa7.76□□□□□ -1.17
CNOT4-205ENST00000423368 HIBCHQ6NVY1 386 aaPredicted RBP7.76□□□□□ -1.17
CNOT4-205ENST00000423368 TSHZ1Q6ZSZ6 1077 aa7.76□□□□□ -1.17
CNOT4-205ENST00000423368 RUNDC1Q96C34 613 aa7.76□□□□□ -1.17
CNOT4-205ENST00000423368 LBHD1Q9BQE6 289 aaPredicted RBP7.76□□□□□ -1.17
CNOT4-205ENST00000423368 RNF39Q9H2S5 420 aa7.76□□□□□ -1.17
CNOT4-205ENST00000423368 SERPINA10Q9UK55 444 aa7.76□□□□□ -1.17
CNOT4-205ENST00000423368 SPG7Q9UQ90 795 aa7.76□□□□□ -1.17
CNOT4-205ENST00000423368 PRXQ9BXM0 1461 aa7.76□□□□□ -1.17
CNOT4-205ENST00000423368 PRPHP41219 470 aa7.76□□□□□ -1.17
CNOT4-205ENST00000423368 CTCFP49711 727 aaPredicted RBP7.76□□□□□ -1.17
CNOT4-205ENST00000423368 STIM1Q13586 685 aa7.76□□□□□ -1.17
CNOT4-205ENST00000423368 PPP1R7Q15435 360 aa7.76□□□□□ -1.17
CNOT4-205ENST00000423368 KBTBD12Q3ZCT8 623 aa7.76□□□□□ -1.17
CNOT4-205ENST00000423368 ZNF569Q5MCW4 686 aa7.76□□□□□ -1.17
CNOT4-205ENST00000423368 SEPT14Q6ZU15 432 aa7.76□□□□□ -1.17
CNOT4-205ENST00000423368 RSRC2Q7L4I2 434 aaKnown RBP7.76□□□□□ -1.17
CNOT4-205ENST00000423368 STK11IPQ8N1F8 1099 aa7.76□□□□□ -1.17
CNOT4-205ENST00000423368 UHMK1Q8TAS1 419 aaKnown RBP7.76□□□□□ -1.17
CNOT4-205ENST00000423368 SNRNP27Q8WVK2 155 aaKnown RBP7.76□□□□□ -1.17
CNOT4-205ENST00000423368 TESK2Q96S53 571 aa7.76□□□□□ -1.17
CNOT4-205ENST00000423368 TMX4Q9H1E5 349 aaPredicted RBP7.76□□□□□ -1.17
CNOT4-205ENST00000423368 IL25Q9H293 177 aa7.76□□□□□ -1.17
CNOT4-205ENST00000423368 HOOK1Q9UJC3 728 aaKnown RBP7.76□□□□□ -1.17
CNOT4-205ENST00000423368 PCDHGC5Q9Y5F6 944 aa7.76□□□□□ -1.17
CNOT4-205ENST00000423368 TTC41PQ6P2S7 1318 aa7.76□□□□□ -1.17
CNOT4-205ENST00000423368 HPDP32754 393 aaPredicted RBP7.76□□□□□ -1.17
CNOT4-205ENST00000423368 SLC7A5Q01650 507 aa7.76□□□□□ -1.17
CNOT4-205ENST00000423368 APBA1Q02410 837 aa7.76□□□□□ -1.17
CNOT4-205ENST00000423368 DDR1Q08345 913 aa7.76□□□□□ -1.17
CNOT4-205ENST00000423368 CDCA2Q69YH5 1023 aaPredicted RBP7.76□□□□□ -1.17
CNOT4-205ENST00000423368 BRD8Q9H0E9 1235 aa7.76□□□□□ -1.17
CNOT4-205ENST00000423368 OCEL1Q9H607 264 aa7.76□□□□□ -1.17
CNOT4-205ENST00000423368 DNAAF2Q9NVR5 837 aaKnown RBP7.76□□□□□ -1.17
CNOT4-205ENST00000423368 IQSEC3Q9UPP2 1182 aaPredicted RBP7.76□□□□□ -1.17
CNOT4-205ENST00000423368 TRPC6Q9Y210 931 aa7.76□□□□□ -1.17
CNOT4-205ENST00000423368 CDHR2Q9BYE9 1310 aa7.75□□□□□ -1.17
CNOT4-205ENST00000423368 TMEM232C9JQI7 657 aa7.75□□□□□ -1.17
CNOT4-205ENST00000423368 SASH1O94885 1247 aa7.75□□□□□ -1.17
CNOT4-205ENST00000423368 MATR3P43243 847 aaKnown RBP eCLIP7.75□□□□□ -1.171e-6■■■■□ 20.8
CNOT4-205ENST00000423368 MXRA7P84157 204 aa7.75□□□□□ -1.17
CNOT4-205ENST00000423368 AMOTQ4VCS5 1084 aa7.75□□□□□ -1.17
CNOT4-205ENST00000423368 PPP1R15BQ5SWA1 713 aa7.75□□□□□ -1.17
CNOT4-205ENST00000423368 CCDC121Q6ZUS5 278 aa7.75□□□□□ -1.17
CNOT4-205ENST00000423368 TMCO5AQ8N6Q1 288 aa7.75□□□□□ -1.17
CNOT4-205ENST00000423368 INTS4Q96HW7 963 aaKnown RBP7.75□□□□□ -1.17
CNOT4-205ENST00000423368 USP28Q96RU2 1077 aa7.75□□□□□ -1.17
CNOT4-205ENST00000423368 UBE2OQ9C0C9 1292 aaKnown RBP7.75□□□□□ -1.17
CNOT4-205ENST00000423368 CLSTN2Q9H4D0 955 aa7.75□□□□□ -1.17
CNOT4-205ENST00000423368 NLRP2Q9NX02 1062 aa7.75□□□□□ -1.17
CNOT4-205ENST00000423368 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.75□□□□□ -1.17
CNOT4-205ENST00000423368 ZBTB7BO15156 539 aaPredicted RBP7.75□□□□□ -1.17
CNOT4-205ENST00000423368 IMMTQ16891 758 aaKnown RBP7.75□□□□□ -1.17
CNOT4-205ENST00000423368 HDGFL1Q5TGJ6 251 aa7.75□□□□□ -1.17
CNOT4-205ENST00000423368 MIS18BP1Q6P0N0 1132 aa7.75□□□□□ -1.17
CNOT4-205ENST00000423368 RUFY3Q7L099 469 aa7.75□□□□□ -1.17
CNOT4-205ENST00000423368 CEP57L1Q8IYX8 460 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms