RNA–Protein interactions for RNA: ENST00000418375.1

TMEM248-203, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 545 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-203ENST00000418375 KIF1BPQ96EK5 621 aa16.41■□□□□ 0.22
TMEM248-203ENST00000418375 HDAC9Q9UKV0 1011 aa16.41■□□□□ 0.22
TMEM248-203ENST00000418375 JAG2Q9Y219 1238 aa16.41■□□□□ 0.22
TMEM248-203ENST00000418375 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.41■□□□□ 0.22
TMEM248-203ENST00000418375 CA12O43570 354 aa16.4■□□□□ 0.22
TMEM248-203ENST00000418375 PHKA1P46020 1223 aa16.4■□□□□ 0.22
TMEM248-203ENST00000418375 MFSD14BQ5SR56 506 aa16.4■□□□□ 0.22
TMEM248-203ENST00000418375 RGMBQ6NW40 437 aa16.4■□□□□ 0.22
TMEM248-203ENST00000418375 KIAA0825Q8IV33 1275 aa16.4■□□□□ 0.22
TMEM248-203ENST00000418375 RHPN1Q8TCX5 695 aa16.4■□□□□ 0.22
TMEM248-203ENST00000418375 CDCA5Q96FF9 252 aa16.4■□□□□ 0.22
TMEM248-203ENST00000418375 DENND2AQ9ULE3 1009 aa16.4■□□□□ 0.22
TMEM248-203ENST00000418375 PCDHB15Q9Y5E8 787 aa16.4■□□□□ 0.22
TMEM248-203ENST00000418375 APBB1O00213 710 aa16.39■□□□□ 0.21
TMEM248-203ENST00000418375 ZBTB22O15209 634 aa16.39■□□□□ 0.21
TMEM248-203ENST00000418375 CERS5Q8N5B7 392 aa16.39■□□□□ 0.21
TMEM248-203ENST00000418375 WDR66Q8TBY9 1149 aa16.39■□□□□ 0.21
TMEM248-203ENST00000418375 PSME4Q14997 1843 aa16.39■□□□□ 0.21
TMEM248-203ENST00000418375 PITPNM2Q9BZ72 1349 aa16.39■□□□□ 0.21
TMEM248-203ENST00000418375 CCDC158Q5M9N0 1113 aa16.38■□□□□ 0.21
TMEM248-203ENST00000418375 CLASRPQ8N2M8 674 aaKnown RBP16.38■□□□□ 0.21
TMEM248-203ENST00000418375 CCDC102AQ96A19 550 aa16.38■□□□□ 0.21
TMEM248-203ENST00000418375 TSKSQ9UJT2 592 aa16.38■□□□□ 0.21
TMEM248-203ENST00000418375 UQCRFS1P1P0C7P4 283 aa16.37■□□□□ 0.21
TMEM248-203ENST00000418375 ZNF157P51786 506 aaPredicted RBP16.37■□□□□ 0.21
TMEM248-203ENST00000418375 NBPF9Q3BBW0 867 aa16.37■□□□□ 0.21
TMEM248-203ENST00000418375 AACSQ86V21 672 aa16.37■□□□□ 0.21
TMEM248-203ENST00000418375 EXOC6Q8TAG9 804 aa16.37■□□□□ 0.21
TMEM248-203ENST00000418375 EAF2Q96CJ1 260 aaPredicted RBP16.37■□□□□ 0.21
TMEM248-203ENST00000418375 ZIC5Q96T25 663 aa16.37■□□□□ 0.21
TMEM248-203ENST00000418375 DBNDD2Q9BQY9 259 aa16.37■□□□□ 0.21
TMEM248-203ENST00000418375 DCTPP1Q9H773 170 aa16.37■□□□□ 0.21
TMEM248-203ENST00000418375 IL1RAPL2Q9NP60 686 aa16.37■□□□□ 0.21
TMEM248-203ENST00000418375 SUGT1Q9Y2Z0 365 aa16.37■□□□□ 0.21
TMEM248-203ENST00000418375 FAM155AB1AL88 458 aaPredicted RBP16.36■□□□□ 0.21
TMEM248-203ENST00000418375 F8W031 263 aaPredicted RBP16.36■□□□□ 0.21
TMEM248-203ENST00000418375 WNT10BO00744 389 aa16.36■□□□□ 0.21
TMEM248-203ENST00000418375 RASGRF1Q13972 1273 aa16.36■□□□□ 0.21
TMEM248-203ENST00000418375 TTC39AQ5SRH9 613 aa16.36■□□□□ 0.21
TMEM248-203ENST00000418375 LRRCC1Q9C099 1032 aa16.36■□□□□ 0.21
TMEM248-203ENST00000418375 CCDC8Q9H0W5 538 aaPredicted RBP16.36■□□□□ 0.21
TMEM248-203ENST00000418375 ARID4AP29374 1257 aaPredicted RBP16.35■□□□□ 0.21
TMEM248-203ENST00000418375 FKBP1BP68106 108 aa16.35■□□□□ 0.21
TMEM248-203ENST00000418375 ZGPATQ8N5A5 531 aaKnown RBP16.35■□□□□ 0.21
TMEM248-203ENST00000418375 DBNLQ9UJU6 430 aaKnown RBP16.35■□□□□ 0.21
TMEM248-203ENST00000418375 TTF2Q9UNY4 1162 aaKnown RBP16.35■□□□□ 0.21
TMEM248-203ENST00000418375 SCAF8Q9UPN6 1271 aaKnown RBP16.35■□□□□ 0.21
TMEM248-203ENST00000418375 ARAP2Q8WZ64 1704 aa16.35■□□□□ 0.21
TMEM248-203ENST00000418375 PDS5AQ29RF7 1337 aaKnown RBP16.35■□□□□ 0.21
TMEM248-203ENST00000418375 IFIT2P09913 472 aaKnown RBP16.34■□□□□ 0.21
TMEM248-203ENST00000418375 HDAC1Q13547 482 aaPredicted RBP16.34■□□□□ 0.21
TMEM248-203ENST00000418375 DLGAP5Q15398 846 aa16.34■□□□□ 0.21
TMEM248-203ENST00000418375 PPP4R3CPQ6ZMV5 832 aa16.34■□□□□ 0.21
TMEM248-203ENST00000418375 MAST3O60307 1309 aa16.34■□□□□ 0.21
TMEM248-203ENST00000418375 SALL1Q9NSC2 1324 aa16.34■□□□□ 0.21
TMEM248-203ENST00000418375 SLC10A3P09131 477 aa16.33■□□□□ 0.2
TMEM248-203ENST00000418375 IRX6P78412 446 aaPredicted RBP16.33■□□□□ 0.2
TMEM248-203ENST00000418375 KIF23Q02241 960 aaPredicted RBP16.33■□□□□ 0.2
TMEM248-203ENST00000418375 PRAMEF18Q5VWM3 479 aa16.33■□□□□ 0.2
TMEM248-203ENST00000418375 SPATA5Q8NB90 893 aa16.33■□□□□ 0.2
TMEM248-203ENST00000418375 MTMR14Q8NCE2 650 aa16.33■□□□□ 0.2
TMEM248-203ENST00000418375 ZNF512BQ96KM6 892 aaPredicted RBP16.33■□□□□ 0.2
TMEM248-203ENST00000418375 BCL11AQ9H165 835 aa16.33■□□□□ 0.2
TMEM248-203ENST00000418375 TLR7Q9NYK1 1049 aaKnown RBP16.33■□□□□ 0.2
TMEM248-203ENST00000418375 SERPINA10Q9UK55 444 aa16.33■□□□□ 0.2
TMEM248-203ENST00000418375 COL1A1P02452 1464 aaPredicted RBP16.33■□□□□ 0.2
TMEM248-203ENST00000418375 POLR2AP24928 1970 aaKnown RBP16.33■□□□□ 0.2
TMEM248-203ENST00000418375 ZNF646O15015 1829 aaPredicted RBP16.32■□□□□ 0.2
TMEM248-203ENST00000418375 LDHBP07195 334 aaKnown RBP16.32■□□□□ 0.2
TMEM248-203ENST00000418375 RBM5P52756 815 aaKnown RBP eCLIP16.32■□□□□ 0.2
TMEM248-203ENST00000418375 HDLBPQ00341 1268 aaKnown RBP16.32■□□□□ 0.2
TMEM248-203ENST00000418375 CFAP100Q494V2 611 aa16.32■□□□□ 0.2
TMEM248-203ENST00000418375 SPTY2D1Q68D10 685 aaPredicted RBP16.32■□□□□ 0.2
TMEM248-203ENST00000418375 ABHD8Q96I13 439 aa16.32■□□□□ 0.2
TMEM248-203ENST00000418375 RWDD1Q9H446 243 aaPredicted RBP16.32■□□□□ 0.2
TMEM248-203ENST00000418375 HMG20BQ9P0W2 317 aa16.32■□□□□ 0.2
TMEM248-203ENST00000418375 MYO1BO43795 1136 aa16.31■□□□□ 0.2
TMEM248-203ENST00000418375 CENPBP07199 599 aaPredicted RBP16.31■□□□□ 0.2
TMEM248-203ENST00000418375 NF2P35240 595 aa16.31■□□□□ 0.2
TMEM248-203ENST00000418375 MCAMP43121 646 aa16.31■□□□□ 0.2
TMEM248-203ENST00000418375 GRIK5Q16478 980 aa16.31■□□□□ 0.2
TMEM248-203ENST00000418375 APOBEC3FQ8IUX4 373 aaKnown RBP16.31■□□□□ 0.2
TMEM248-203ENST00000418375 TEKT1Q969V4 418 aa16.31■□□□□ 0.2
TMEM248-203ENST00000418375 GCC1Q96CN9 775 aa16.31■□□□□ 0.2
TMEM248-203ENST00000418375 ZBED3Q96IU2 234 aaPredicted RBP16.31■□□□□ 0.2
TMEM248-203ENST00000418375 MRIQ9BWK5 157 aa16.31■□□□□ 0.2
TMEM248-203ENST00000418375 ZBTB47Q9UFB7 747 aaPredicted RBP16.31■□□□□ 0.2
TMEM248-203ENST00000418375 ABCF2Q9UG63 623 aa16.31■□□□□ 0.2
TMEM248-203ENST00000418375 PRDX5P30044 214 aa16.3■□□□□ 0.2
TMEM248-203ENST00000418375 CRKP46108 304 aa16.3■□□□□ 0.2
TMEM248-203ENST00000418375 TTLL12Q14166 644 aaPredicted RBP16.3■□□□□ 0.2
TMEM248-203ENST00000418375 MOB2Q70IA6 237 aa16.3■□□□□ 0.2
TMEM248-203ENST00000418375 RASAL3Q86YV0 1011 aa16.3■□□□□ 0.2
TMEM248-203ENST00000418375 SAGE1Q9NXZ1 904 aa16.3■□□□□ 0.2
TMEM248-203ENST00000418375 PAPPA2Q9BXP8 1791 aa16.29■□□□□ 0.2
TMEM248-203ENST00000418375 SPDYE2BA6NHP3 402 aa16.29■□□□□ 0.2
TMEM248-203ENST00000418375 UBE2Q2LH0YL09 131 aa16.29■□□□□ 0.2
TMEM248-203ENST00000418375 SMARCA5O60264 1052 aaPredicted RBP16.29■□□□□ 0.2
TMEM248-203ENST00000418375 SPDYE6P0CI01 402 aa16.29■□□□□ 0.2
TMEM248-203ENST00000418375 PI16Q6UXB8 463 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 125.1 ms