RNA–Protein interactions for RNA: ENST00000417946.5

CPS1-202, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 3

Gene CPS1, Length 699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-202ENST00000417946 C7orf43Q8WVR3 580 aa8.36□□□□□ -1.07
CPS1-202ENST00000417946 LPIN2Q92539 896 aa8.36□□□□□ -1.07
CPS1-202ENST00000417946 RPGRQ92834 1020 aaKnown RBP8.36□□□□□ -1.07
CPS1-202ENST00000417946 EDC3Q96F86 508 aaKnown RBP8.36□□□□□ -1.07
CPS1-202ENST00000417946 MASTLQ96GX5 879 aa8.36□□□□□ -1.07
CPS1-202ENST00000417946 HAUS7Q99871 368 aa8.36□□□□□ -1.07
CPS1-202ENST00000417946 MAST2Q6P0Q8 1798 aa8.35□□□□□ -1.07
CPS1-202ENST00000417946 SCN9AQ15858 1988 aa8.35□□□□□ -1.07
CPS1-202ENST00000417946 FER1L6Q2WGJ9 1857 aa8.35□□□□□ -1.07
CPS1-202ENST00000417946 COL4A5P29400 1685 aa8.35□□□□□ -1.07
CPS1-202ENST00000417946 PPEF1O14829 653 aaPredicted RBP8.35□□□□□ -1.07
CPS1-202ENST00000417946 NPHP1O15259 732 aa8.35□□□□□ -1.07
CPS1-202ENST00000417946 BBOX1O75936 387 aa8.35□□□□□ -1.07
CPS1-202ENST00000417946 MAP4K4O95819 1239 aaPredicted RBP8.35□□□□□ -1.07
CPS1-202ENST00000417946 CHGBP05060 677 aa8.35□□□□□ -1.07
CPS1-202ENST00000417946 MCAMP43121 646 aa8.35□□□□□ -1.07
CPS1-202ENST00000417946 UBE4AQ14139 1066 aa8.35□□□□□ -1.07
CPS1-202ENST00000417946 CCDC102BQ68D86 513 aa8.35□□□□□ -1.07
CPS1-202ENST00000417946 ZNF512BQ96KM6 892 aaPredicted RBP8.35□□□□□ -1.07
CPS1-202ENST00000417946 NEUROD6Q96NK8 337 aa8.35□□□□□ -1.07
CPS1-202ENST00000417946 GPR101Q96P66 508 aaPredicted RBP8.35□□□□□ -1.07
CPS1-202ENST00000417946 BOLA2Q9H3K6 86 aa8.35□□□□□ -1.07
CPS1-202ENST00000417946 PODXL2Q9NZ53 605 aa8.35□□□□□ -1.07
CPS1-202ENST00000417946 AKAP2Q9Y2D5 859 aa8.35□□□□□ -1.07
CPS1-202ENST00000417946 ATP6V0A2Q9Y487 856 aa8.35□□□□□ -1.07
CPS1-202ENST00000417946 ARFGEF1Q9Y6D6 1849 aa8.35□□□□□ -1.07
CPS1-202ENST00000417946 RFX7Q2KHR2 1363 aa8.35□□□□□ -1.07
CPS1-202ENST00000417946 PSME4Q14997 1843 aa8.34□□□□□ -1.07
CPS1-202ENST00000417946 CDC45O75419 566 aa8.34□□□□□ -1.07
CPS1-202ENST00000417946 SLC5A1P13866 664 aa8.34□□□□□ -1.07
CPS1-202ENST00000417946 DPEP1P16444 411 aa8.34□□□□□ -1.07
CPS1-202ENST00000417946 RASGRF1Q13972 1273 aa8.34□□□□□ -1.07
CPS1-202ENST00000417946 MFSD10Q14728 455 aa8.34□□□□□ -1.07
CPS1-202ENST00000417946 PRPF40BQ6NWY9 871 aaKnown RBP8.34□□□□□ -1.07
CPS1-202ENST00000417946 C15orf52Q6ZUT6 534 aaKnown RBP8.34□□□□□ -1.07
CPS1-202ENST00000417946 FBXO33Q7Z6M2 555 aa8.34□□□□□ -1.07
CPS1-202ENST00000417946 SP8Q8IXZ3 490 aa8.34□□□□□ -1.07
CPS1-202ENST00000417946 FBXW7Q969H0 707 aa8.34□□□□□ -1.07
CPS1-202ENST00000417946 FAM84BQ96KN1 310 aaPredicted RBP8.34□□□□□ -1.07
CPS1-202ENST00000417946 ANKRD2Q9GZV1 360 aa8.34□□□□□ -1.07
CPS1-202ENST00000417946 ANTXR1Q9H6X2 564 aa8.34□□□□□ -1.07
CPS1-202ENST00000417946 POLLQ9UGP5 575 aa8.34□□□□□ -1.07
CPS1-202ENST00000417946 XDHP47989 1333 aa8.33□□□□□ -1.08
CPS1-202ENST00000417946 ERC2O15083 957 aa8.33□□□□□ -1.08
CPS1-202ENST00000417946 CHMLP26374 656 aa8.33□□□□□ -1.08
CPS1-202ENST00000417946 POLD1P28340 1107 aa8.33□□□□□ -1.08
CPS1-202ENST00000417946 GYG1P46976 350 aa8.33□□□□□ -1.08
CPS1-202ENST00000417946 BCAMP50895 628 aa8.33□□□□□ -1.08
CPS1-202ENST00000417946 TMC4Q7Z404 712 aa8.33□□□□□ -1.08
CPS1-202ENST00000417946 TBC1D16Q8TBP0 767 aa8.33□□□□□ -1.08
CPS1-202ENST00000417946 GPATCH3Q96I76 525 aa8.33□□□□□ -1.08
CPS1-202ENST00000417946 SPON1Q9HCB6 807 aa8.33□□□□□ -1.08
CPS1-202ENST00000417946 PIH1D3Q9NQM4 214 aaKnown RBP8.33□□□□□ -1.08
CPS1-202ENST00000417946 HMG20BQ9P0W2 317 aa8.33□□□□□ -1.08
CPS1-202ENST00000417946 MED23Q9ULK4 1368 aa8.33□□□□□ -1.08
CPS1-202ENST00000417946 A0A0G2JLW4 131 aa8.32□□□□□ -1.08
CPS1-202ENST00000417946 H0YIN7 160 aa8.32□□□□□ -1.08
CPS1-202ENST00000417946 CYP2E1P05181 493 aaPredicted RBP8.32□□□□□ -1.08
CPS1-202ENST00000417946 IFIT1P09914 478 aaKnown RBP8.32□□□□□ -1.08
CPS1-202ENST00000417946 ZAP70P43403 619 aa8.32□□□□□ -1.08
CPS1-202ENST00000417946 PTPN5P54829 565 aa8.32□□□□□ -1.08
CPS1-202ENST00000417946 SLFNL1Q499Z3 407 aa8.32□□□□□ -1.08
CPS1-202ENST00000417946 BBXQ8WY36 941 aaPredicted RBP8.32□□□□□ -1.08
CPS1-202ENST00000417946 EVI5LQ96CN4 794 aa8.32□□□□□ -1.08
CPS1-202ENST00000417946 SNRKQ9NRH2 765 aa8.32□□□□□ -1.08
CPS1-202ENST00000417946 PDS5AQ29RF7 1337 aaKnown RBP8.31□□□□□ -1.08
CPS1-202ENST00000417946 ADAMTSL1Q8N6G6 1762 aa8.31□□□□□ -1.08
CPS1-202ENST00000417946 A0A0D9SFI3 127 aa8.31□□□□□ -1.08
CPS1-202ENST00000417946 GOLIM4O00461 696 aa8.31□□□□□ -1.08
CPS1-202ENST00000417946 UFL1O94874 794 aa8.31□□□□□ -1.08
CPS1-202ENST00000417946 UQCRFS1P1P0C7P4 283 aa8.31□□□□□ -1.08
CPS1-202ENST00000417946 ATP2B4P23634 1241 aa8.31□□□□□ -1.08
CPS1-202ENST00000417946 TTC39AQ5SRH9 613 aa8.31□□□□□ -1.08
CPS1-202ENST00000417946 KBTBD3Q8NAB2 608 aa8.31□□□□□ -1.08
CPS1-202ENST00000417946 NLGN2Q8NFZ4 835 aa8.31□□□□□ -1.08
CPS1-202ENST00000417946 ZNF384Q8TF68 577 aa8.31□□□□□ -1.08
CPS1-202ENST00000417946 WNT2BQ93097 391 aa8.31□□□□□ -1.08
CPS1-202ENST00000417946 CNKSR1Q969H4 720 aa8.31□□□□□ -1.08
CPS1-202ENST00000417946 ZNF622Q969S3 477 aaKnown RBP eCLIP8.31□□□□□ -1.08
CPS1-202ENST00000417946 DNAJC2Q99543 621 aaKnown RBP8.31□□□□□ -1.08
CPS1-202ENST00000417946 ESYT1Q9BSJ8 1104 aa8.31□□□□□ -1.08
CPS1-202ENST00000417946 RTFDC1Q9BY42 306 aaPredicted RBP8.31□□□□□ -1.08
CPS1-202ENST00000417946 PAG1Q9NWQ8 432 aa8.31□□□□□ -1.08
CPS1-202ENST00000417946 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.31□□□□□ -1.08
CPS1-202ENST00000417946 LEMD3Q9Y2U8 911 aa8.31□□□□□ -1.08
CPS1-202ENST00000417946 CCDC88AQ3V6T2 1871 aa8.3□□□□□ -1.08
CPS1-202ENST00000417946 TRIM6-TRIM34B2RNG4 842 aa8.3□□□□□ -1.08
CPS1-202ENST00000417946 ALDH1B1P30837 517 aa8.3□□□□□ -1.08
CPS1-202ENST00000417946 TGFB2P61812 414 aa8.3□□□□□ -1.08
CPS1-202ENST00000417946 NMIQ13287 307 aaPredicted RBP8.3□□□□□ -1.08
CPS1-202ENST00000417946 CCDC158Q5M9N0 1113 aa8.3□□□□□ -1.08
CPS1-202ENST00000417946 CNTROBQ8N137 903 aa8.3□□□□□ -1.08
CPS1-202ENST00000417946 SPATA5Q8NB90 893 aa8.3□□□□□ -1.08
CPS1-202ENST00000417946 TDRD7Q8NHU6 1098 aaKnown RBP8.3□□□□□ -1.08
CPS1-202ENST00000417946 RILPL2Q969X0 211 aa8.3□□□□□ -1.08
CPS1-202ENST00000417946 FAM227BQ96M60 508 aa8.3□□□□□ -1.08
CPS1-202ENST00000417946 ZBED2Q9BTP6 218 aa8.3□□□□□ -1.08
CPS1-202ENST00000417946 GGA1Q9UJY5 639 aa8.3□□□□□ -1.08
CPS1-202ENST00000417946 NSFL1CQ9UNZ2 370 aaKnown RBP8.3□□□□□ -1.08
CPS1-202ENST00000417946 IQSEC3Q9UPP2 1182 aaPredicted RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms