RNA–Protein interactions for RNA: ENST00000417702.5

NUP50-204, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-204ENST00000417702 LBX1P52954 281 aa18.97■□□□□ 0.63
NUP50-204ENST00000417702 GRIK5Q16478 980 aa18.97■□□□□ 0.63
NUP50-204ENST00000417702 IFFO2Q5TF58 517 aa18.97■□□□□ 0.63
NUP50-204ENST00000417702 MOB2Q70IA6 237 aa18.97■□□□□ 0.63
NUP50-204ENST00000417702 TEKT1Q969V4 418 aa18.97■□□□□ 0.63
NUP50-204ENST00000417702 ZNF70Q9UC06 446 aaPredicted RBP18.97■□□□□ 0.63
NUP50-204ENST00000417702 SEMA3EO15041 775 aa18.96■□□□□ 0.63
NUP50-204ENST00000417702 HSPA8P11142 646 aaKnown RBP18.96■□□□□ 0.63
NUP50-204ENST00000417702 TFCP2Q12800 502 aa18.96■□□□□ 0.63
NUP50-204ENST00000417702 SUPT20HL1Q3ZLR7 823 aa18.96■□□□□ 0.63
NUP50-204ENST00000417702 SPDYE2Q495Y8 402 aa18.96■□□□□ 0.63
NUP50-204ENST00000417702 TNS4Q8IZW8 715 aa18.96■□□□□ 0.63
NUP50-204ENST00000417702 MRIQ9BWK5 157 aa18.96■□□□□ 0.63
NUP50-204ENST00000417702 TDRD3Q9H7E2 651 aaKnown RBP18.96■□□□□ 0.63
NUP50-204ENST00000417702 DENND2AQ9ULE3 1009 aa18.96■□□□□ 0.63
NUP50-204ENST00000417702 AOX1Q06278 1338 aa18.96■□□□□ 0.63
NUP50-204ENST00000417702 ZBTB7BO15156 539 aaPredicted RBP18.95■□□□□ 0.62
NUP50-204ENST00000417702 PHKA1P46020 1223 aa18.95■□□□□ 0.62
NUP50-204ENST00000417702 TIMM10P62072 90 aa18.95■□□□□ 0.62
NUP50-204ENST00000417702 KIF23Q02241 960 aaPredicted RBP18.95■□□□□ 0.62
NUP50-204ENST00000417702 PRKG1Q13976 671 aa18.95■□□□□ 0.62
NUP50-204ENST00000417702 ZIC5Q96T25 663 aa18.95■□□□□ 0.62
NUP50-204ENST00000417702 A0A1B0GUL7 405 aa18.94■□□□□ 0.62
NUP50-204ENST00000417702 PPP1R12BO60237 982 aaPredicted RBP18.94■□□□□ 0.62
NUP50-204ENST00000417702 ADORA1P30542 326 aa18.94■□□□□ 0.62
NUP50-204ENST00000417702 ATP8B2P98198 1209 aa18.94■□□□□ 0.62
NUP50-204ENST00000417702 RASA3Q14644 834 aa18.94■□□□□ 0.62
NUP50-204ENST00000417702 CCDC102BQ68D86 513 aa18.94■□□□□ 0.62
NUP50-204ENST00000417702 RASAL3Q86YV0 1011 aa18.94■□□□□ 0.62
NUP50-204ENST00000417702 C1orf115Q9H7X2 142 aa18.94■□□□□ 0.62
NUP50-204ENST00000417702 ANGEL1Q9UNK9 670 aaKnown RBP18.94■□□□□ 0.62
NUP50-204ENST00000417702 ARAP2Q8WZ64 1704 aa18.94■□□□□ 0.62
NUP50-204ENST00000417702 TNNI2P48788 182 aa18.93■□□□□ 0.62
NUP50-204ENST00000417702 OS9Q13438 667 aaPredicted RBP18.93■□□□□ 0.62
NUP50-204ENST00000417702 POLA2Q14181 598 aa18.93■□□□□ 0.62
NUP50-204ENST00000417702 MVPQ14764 893 aaKnown RBP18.93■□□□□ 0.62
NUP50-204ENST00000417702 HHIPL2Q6UWX4 724 aa18.93■□□□□ 0.62
NUP50-204ENST00000417702 REM2Q8IYK8 340 aaPredicted RBP18.93■□□□□ 0.62
NUP50-204ENST00000417702 PANK1Q8TE04 598 aa18.93■□□□□ 0.62
NUP50-204ENST00000417702 XAGE2Q96GT9 111 aa18.93■□□□□ 0.62
NUP50-204ENST00000417702 ZDHHC15Q96MV8 337 aa18.93■□□□□ 0.62
NUP50-204ENST00000417702 NEUROD6Q96NK8 337 aa18.93■□□□□ 0.62
NUP50-204ENST00000417702 TMOD2Q9NZR1 351 aa18.93■□□□□ 0.62
NUP50-204ENST00000417702 ECM29Q5VYK3 1845 aa18.93■□□□□ 0.62
NUP50-204ENST00000417702 TCP10L2B9ZVM9 353 aa18.92■□□□□ 0.62
NUP50-204ENST00000417702 ZBTB22O15209 634 aa18.92■□□□□ 0.62
NUP50-204ENST00000417702 LDHBP07195 334 aaKnown RBP18.92■□□□□ 0.62
NUP50-204ENST00000417702 GORABQ5T7V8 394 aa18.92■□□□□ 0.62
NUP50-204ENST00000417702 ZGPATQ8N5A5 531 aaKnown RBP18.92■□□□□ 0.62
NUP50-204ENST00000417702 SSH3Q8TE77 659 aa18.92■□□□□ 0.62
NUP50-204ENST00000417702 RCAN3Q9UKA8 241 aa18.92■□□□□ 0.62
NUP50-204ENST00000417702 NBPF12Q5TAG4 269 aaPredicted RBP18.91■□□□□ 0.62
NUP50-204ENST00000417702 TSKSQ9UJT2 592 aa18.91■□□□□ 0.62
NUP50-204ENST00000417702 SALL1Q9NSC2 1324 aa18.91■□□□□ 0.62
NUP50-204ENST00000417702 SURF6O75683 361 aaKnown RBP18.9■□□□□ 0.62
NUP50-204ENST00000417702 IREB2P48200 963 aaKnown RBP18.9■□□□□ 0.62
NUP50-204ENST00000417702 MAP3K11Q16584 847 aa18.9■□□□□ 0.62
NUP50-204ENST00000417702 LDLRAD1Q5T700 205 aa18.9■□□□□ 0.62
NUP50-204ENST00000417702 APOBEC3HQ6NTF7 200 aaKnown RBP18.9■□□□□ 0.62
NUP50-204ENST00000417702 MYH13Q9UKX3 1938 aa18.9■□□□□ 0.62
NUP50-204ENST00000417702 PRDX5P30044 214 aa18.89■□□□□ 0.61
NUP50-204ENST00000417702 RASGRF1Q13972 1273 aa18.89■□□□□ 0.61
NUP50-204ENST00000417702 CSRNP1Q96S65 589 aa18.89■□□□□ 0.61
NUP50-204ENST00000417702 UNCXA6NJT0 531 aa18.88■□□□□ 0.61
NUP50-204ENST00000417702 FKBP1CQ5VVH2 108 aa18.88■□□□□ 0.61
NUP50-204ENST00000417702 SPTY2D1Q68D10 685 aaPredicted RBP18.88■□□□□ 0.61
NUP50-204ENST00000417702 SLC10A4Q96EP9 437 aa18.88■□□□□ 0.61
NUP50-204ENST00000417702 TMEM39BQ9GZU3 492 aa18.88■□□□□ 0.61
NUP50-204ENST00000417702 SAGE1Q9NXZ1 904 aa18.88■□□□□ 0.61
NUP50-204ENST00000417702 FZD1Q9UP38 647 aa18.88■□□□□ 0.61
NUP50-204ENST00000417702 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.88■□□□□ 0.61
NUP50-204ENST00000417702 PDS5AQ29RF7 1337 aaKnown RBP18.88■□□□□ 0.61
NUP50-204ENST00000417702 SSC5DA1L4H1 1573 aa18.87■□□□□ 0.61
NUP50-204ENST00000417702 CACNB3P54284 484 aa18.87■□□□□ 0.61
NUP50-204ENST00000417702 DIXDC1Q155Q3 683 aa18.87■□□□□ 0.61
NUP50-204ENST00000417702 CEP85Q6P2H3 762 aa18.87■□□□□ 0.61
NUP50-204ENST00000417702 GPR108Q9NPR9 543 aa18.87■□□□□ 0.61
NUP50-204ENST00000417702 ABCF2Q9UG63 623 aa18.87■□□□□ 0.61
NUP50-204ENST00000417702 DDX19BQ9UMR2 479 aa18.87■□□□□ 0.61
NUP50-204ENST00000417702 NOP58Q9Y2X3 529 aaKnown RBP18.87■□□□□ 0.61
NUP50-204ENST00000417702 DAGLAQ9Y4D2 1042 aa18.87■□□□□ 0.61
NUP50-204ENST00000417702 USP2O75604 605 aaPredicted RBP18.86■□□□□ 0.61
NUP50-204ENST00000417702 MKRN3Q13064 507 aaKnown RBP18.86■□□□□ 0.61
NUP50-204ENST00000417702 FAM83AQ86UY5 434 aa18.86■□□□□ 0.61
NUP50-204ENST00000417702 DZIP1Q86YF9 867 aaKnown RBP18.86■□□□□ 0.61
NUP50-204ENST00000417702 SLF2Q8IX21 1173 aa18.86■□□□□ 0.61
NUP50-204ENST00000417702 TEPSINQ96N21 525 aa18.86■□□□□ 0.61
NUP50-204ENST00000417702 CHMP4BQ9H444 224 aaKnown RBP18.86■□□□□ 0.61
NUP50-204ENST00000417702 RNF186Q9NXI6 227 aa18.86■□□□□ 0.61
NUP50-204ENST00000417702 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.86■□□□□ 0.61
NUP50-204ENST00000417702 TRPA1O75762 1119 aa18.85■□□□□ 0.61
NUP50-204ENST00000417702 UQCRFS1P1P0C7P4 283 aa18.85■□□□□ 0.61
NUP50-204ENST00000417702 TNNI3KQ59H18 835 aa18.85■□□□□ 0.61
NUP50-204ENST00000417702 SPRYD7Q5W111 196 aa18.85■□□□□ 0.61
NUP50-204ENST00000417702 ANKRD13AQ8IZ07 590 aa18.85■□□□□ 0.61
NUP50-204ENST00000417702 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.85■□□□□ 0.61
NUP50-204ENST00000417702 HOOK2Q96ED9 719 aa18.85■□□□□ 0.61
NUP50-204ENST00000417702 COG6Q9Y2V7 657 aa18.85■□□□□ 0.61
NUP50-204ENST00000417702 FPGT-TNNI3KV9GXZ4 949 aa18.85■□□□□ 0.61
NUP50-204ENST00000417702 ARID4AP29374 1257 aaPredicted RBP18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms