RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 SRCIN1Q9C0H9 1055 aa6.63□□□□□ -1.35
HMGB3P23-201ENST00000414981 CYP4F12Q9HCS2 524 aa6.63□□□□□ -1.35
HMGB3P23-201ENST00000414981 RAXQ9Y2V3 346 aa6.63□□□□□ -1.35
HMGB3P23-201ENST00000414981 DLGAP3O95886 979 aa6.62□□□□□ -1.35
HMGB3P23-201ENST00000414981 POU4F3Q15319 338 aa6.62□□□□□ -1.35
HMGB3P23-201ENST00000414981 FDX2Q6P4F2 183 aa6.62□□□□□ -1.35
HMGB3P23-201ENST00000414981 PI16Q6UXB8 463 aa6.62□□□□□ -1.35
HMGB3P23-201ENST00000414981 DTHD1Q6ZMT9 781 aa6.62□□□□□ -1.35
HMGB3P23-201ENST00000414981 MYRFLQ96LU7 910 aa6.62□□□□□ -1.35
HMGB3P23-201ENST00000414981 FRMD6Q96NE9 622 aa6.62□□□□□ -1.35
HMGB3P23-201ENST00000414981 USP26Q9BXU7 913 aa6.62□□□□□ -1.35
HMGB3P23-201ENST00000414981 STOML1Q9UBI4 398 aa6.62□□□□□ -1.35
HMGB3P23-201ENST00000414981 MAOBP27338 520 aa6.61□□□□□ -1.35
HMGB3P23-201ENST00000414981 FCGRTP55899 365 aa6.61□□□□□ -1.35
HMGB3P23-201ENST00000414981 FGD1P98174 961 aa6.61□□□□□ -1.35
HMGB3P23-201ENST00000414981 ATP2B2Q01814 1243 aa6.61□□□□□ -1.35
HMGB3P23-201ENST00000414981 AP3B2Q13367 1082 aa6.61□□□□□ -1.35
HMGB3P23-201ENST00000414981 NXPE4Q6UWF7 544 aa6.61□□□□□ -1.35
HMGB3P23-201ENST00000414981 C12orf50Q8NA57 414 aaPredicted RBP6.61□□□□□ -1.35
HMGB3P23-201ENST00000414981 UTP4Q969X6 686 aaKnown RBP6.61□□□□□ -1.35
HMGB3P23-201ENST00000414981 HIF3AQ9Y2N7 669 aa6.61□□□□□ -1.35
HMGB3P23-201ENST00000414981 SYNGAP1Q96PV0 1343 aa6.6□□□□□ -1.35
HMGB3P23-201ENST00000414981 TIAF1O95411 115 aa6.6□□□□□ -1.35
HMGB3P23-201ENST00000414981 FAAP100Q0VG06 881 aa6.6□□□□□ -1.35
HMGB3P23-201ENST00000414981 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.6□□□□□ -1.35
HMGB3P23-201ENST00000414981 CLEC10AQ8IUN9 316 aa6.6□□□□□ -1.35
HMGB3P23-201ENST00000414981 FAM20CQ8IXL6 584 aa6.6□□□□□ -1.35
HMGB3P23-201ENST00000414981 FAM83CQ9BQN1 747 aa6.6□□□□□ -1.35
HMGB3P23-201ENST00000414981 CORO1BQ9BR76 489 aa6.6□□□□□ -1.35
HMGB3P23-201ENST00000414981 TRIM56Q9BRZ2 755 aaKnown RBP6.6□□□□□ -1.35
HMGB3P23-201ENST00000414981 WWC3Q9ULE0 1092 aa6.6□□□□□ -1.35
HMGB3P23-201ENST00000414981 GSC2O15499 205 aa6.59□□□□□ -1.35
HMGB3P23-201ENST00000414981 BMP3P12645 472 aa6.59□□□□□ -1.35
HMGB3P23-201ENST00000414981 PPP2R3AQ06190 1150 aa6.59□□□□□ -1.35
HMGB3P23-201ENST00000414981 SOX4Q06945 474 aaPredicted RBP6.59□□□□□ -1.35
HMGB3P23-201ENST00000414981 ANKRD24Q8TF21 1146 aa6.59□□□□□ -1.35
HMGB3P23-201ENST00000414981 TMEM39AQ9NV64 488 aa6.59□□□□□ -1.35
HMGB3P23-201ENST00000414981 SPG7Q9UQ90 795 aa6.59□□□□□ -1.35
HMGB3P23-201ENST00000414981 LOC100996750A0A140TA64 210 aa6.58□□□□□ -1.36
HMGB3P23-201ENST00000414981 ANKRD33BA6NCL7 494 aa6.58□□□□□ -1.36
HMGB3P23-201ENST00000414981 LDHBP07195 334 aaKnown RBP6.58□□□□□ -1.36
HMGB3P23-201ENST00000414981 P4HBP07237 508 aaKnown RBP6.58□□□□□ -1.36
HMGB3P23-201ENST00000414981 FSTP19883 344 aa6.58□□□□□ -1.36
HMGB3P23-201ENST00000414981 GSTT1P30711 240 aa6.58□□□□□ -1.36
HMGB3P23-201ENST00000414981 PREPP48147 710 aa6.58□□□□□ -1.36
HMGB3P23-201ENST00000414981 C3orf58Q8NDZ4 430 aa6.58□□□□□ -1.36
HMGB3P23-201ENST00000414981 KRTAP4-6Q9BYQ5 205 aa6.58□□□□□ -1.36
HMGB3P23-201ENST00000414981 OSBPL7Q9BZF2 842 aa6.58□□□□□ -1.36
HMGB3P23-201ENST00000414981 AKAP2Q9Y2D5 859 aa6.58□□□□□ -1.36
HMGB3P23-201ENST00000414981 CTSBP07858 339 aa6.57□□□□□ -1.36
HMGB3P23-201ENST00000414981 ZNF157P51786 506 aaPredicted RBP6.57□□□□□ -1.36
HMGB3P23-201ENST00000414981 ZMYM1Q5SVZ6 1142 aa6.57□□□□□ -1.36
HMGB3P23-201ENST00000414981 SETDB2Q96T68 719 aa6.57□□□□□ -1.36
HMGB3P23-201ENST00000414981 RAD18Q9NS91 495 aa6.57□□□□□ -1.36
HMGB3P23-201ENST00000414981 PPM1HQ9ULR3 514 aa6.57□□□□□ -1.36
HMGB3P23-201ENST00000414981 GAS2O43903 313 aaKnown RBP6.56□□□□□ -1.36
HMGB3P23-201ENST00000414981 PRPF40AO75400 957 aaKnown RBP6.56□□□□□ -1.36
HMGB3P23-201ENST00000414981 IGLV1-40P01703 118 aa6.56□□□□□ -1.36
HMGB3P23-201ENST00000414981 DRD2P14416 443 aa6.56□□□□□ -1.36
HMGB3P23-201ENST00000414981 ERCC3P19447 782 aa6.56□□□□□ -1.36
HMGB3P23-201ENST00000414981 RNF43Q68DV7 783 aa6.56□□□□□ -1.36
HMGB3P23-201ENST00000414981 TRIM42Q8IWZ5 723 aa6.56□□□□□ -1.36
HMGB3P23-201ENST00000414981 C2CD4AQ8NCU7 369 aaPredicted RBP6.56□□□□□ -1.36
HMGB3P23-201ENST00000414981 CEP44Q9C0F1 390 aa6.56□□□□□ -1.36
HMGB3P23-201ENST00000414981 C12orf49Q9H741 205 aa6.56□□□□□ -1.36
HMGB3P23-201ENST00000414981 C7orf69Q9H7B7 122 aa6.56□□□□□ -1.36
HMGB3P23-201ENST00000414981 RNF112Q9ULX5 631 aa6.56□□□□□ -1.36
HMGB3P23-201ENST00000414981 AOC2O75106 756 aa6.55□□□□□ -1.36
HMGB3P23-201ENST00000414981 ECEL1O95672 775 aa6.55□□□□□ -1.36
HMGB3P23-201ENST00000414981 SLFN14P0C7P3 912 aa6.55□□□□□ -1.36
HMGB3P23-201ENST00000414981 ARNTP27540 789 aa6.55□□□□□ -1.36
HMGB3P23-201ENST00000414981 MAP4P27816 1152 aaKnown RBP6.55□□□□□ -1.36
HMGB3P23-201ENST00000414981 USP11P51784 963 aa6.55□□□□□ -1.36
HMGB3P23-201ENST00000414981 HNRNPUQ00839 825 aaKnown RBP eCLIP6.55□□□□□ -1.36
HMGB3P23-201ENST00000414981 EAPPQ56P03 285 aaPredicted RBP6.55□□□□□ -1.36
HMGB3P23-201ENST00000414981 DNAJC14Q6Y2X3 702 aaPredicted RBP6.55□□□□□ -1.36
HMGB3P23-201ENST00000414981 BEND4Q6ZU67 534 aa6.55□□□□□ -1.36
HMGB3P23-201ENST00000414981 NECAB3Q96P71 396 aaPredicted RBP6.55□□□□□ -1.36
HMGB3P23-201ENST00000414981 EMILIN2Q9BXX0 1053 aa6.55□□□□□ -1.36
HMGB3P23-201ENST00000414981 GZF1Q9H116 711 aaPredicted RBP6.55□□□□□ -1.36
HMGB3P23-201ENST00000414981 KCNF1Q9H3M0 494 aa6.55□□□□□ -1.36
HMGB3P23-201ENST00000414981 GSX1Q9H4S2 264 aaPredicted RBP6.55□□□□□ -1.36
HMGB3P23-201ENST00000414981 KRT82Q9NSB4 513 aa6.55□□□□□ -1.36
HMGB3P23-201ENST00000414981 FAM8A1Q9UBU6 413 aa6.55□□□□□ -1.36
HMGB3P23-201ENST00000414981 GPN3Q9UHW5 284 aaPredicted RBP6.55□□□□□ -1.36
HMGB3P23-201ENST00000414981 HMX2A2RU54 273 aa6.54□□□□□ -1.36
HMGB3P23-201ENST00000414981 GSTP1P09211 210 aaKnown RBP6.54□□□□□ -1.36
HMGB3P23-201ENST00000414981 ADH5P11766 374 aa6.54□□□□□ -1.36
HMGB3P23-201ENST00000414981 NME2P22392 152 aa6.54□□□□□ -1.36
HMGB3P23-201ENST00000414981 GNA15P30679 374 aa6.54□□□□□ -1.36
HMGB3P23-201ENST00000414981 NFIAQ12857 509 aa6.54□□□□□ -1.36
HMGB3P23-201ENST00000414981 PDZD3Q86UT5 571 aa6.54□□□□□ -1.36
HMGB3P23-201ENST00000414981 EZH1Q92800 747 aaPredicted RBP6.54□□□□□ -1.36
HMGB3P23-201ENST00000414981 AK5Q9Y6K8 562 aa6.54□□□□□ -1.36
HMGB3P23-201ENST00000414981 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.53□□□□□ -1.36
HMGB3P23-201ENST00000414981 PDE3AQ14432 1141 aa6.53□□□□□ -1.36
HMGB3P23-201ENST00000414981 SGO2Q562F6 1265 aa6.53□□□□□ -1.36
HMGB3P23-201ENST00000414981 DBNDD2Q9BQY9 259 aa6.53□□□□□ -1.36
HMGB3P23-201ENST00000414981 WDR18Q9BV38 432 aa6.53□□□□□ -1.36
HMGB3P23-201ENST00000414981 YIPF2Q9BWQ6 316 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms