RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.85□□□□□ -0.19
RFFL-204ENST00000414419 TEKT1Q969V4 418 aa13.85□□□□□ -0.19
RFFL-204ENST00000414419 DEFB129Q9H1M3 183 aa13.85□□□□□ -0.19
RFFL-204ENST00000414419 WBP1LQ9NX94 342 aa13.85□□□□□ -0.19
RFFL-204ENST00000414419 DENND2AQ9ULE3 1009 aa13.85□□□□□ -0.19
RFFL-204ENST00000414419 PPP2R3BQ9Y5P8 575 aa13.85□□□□□ -0.19
RFFL-204ENST00000414419 PAPPA2Q9BXP8 1791 aa13.85□□□□□ -0.19
RFFL-204ENST00000414419 COL1A1P02452 1464 aaPredicted RBP13.85□□□□□ -0.19
RFFL-204ENST00000414419 SURF6O75683 361 aaKnown RBP13.84□□□□□ -0.19
RFFL-204ENST00000414419 PHKA1P46020 1223 aa13.84□□□□□ -0.19
RFFL-204ENST00000414419 MVPQ14764 893 aaKnown RBP13.84□□□□□ -0.19
RFFL-204ENST00000414419 CCDC102BQ68D86 513 aa13.84□□□□□ -0.19
RFFL-204ENST00000414419 ARMC9Q7Z3E5 817 aa13.84□□□□□ -0.19
RFFL-204ENST00000414419 XAGE2Q96GT9 111 aa13.84□□□□□ -0.19
RFFL-204ENST00000414419 CHMP4BQ9H444 224 aaKnown RBP13.84□□□□□ -0.19
RFFL-204ENST00000414419 TDRD3Q9H7E2 651 aaKnown RBP13.84□□□□□ -0.19
RFFL-204ENST00000414419 ZNF70Q9UC06 446 aaPredicted RBP13.84□□□□□ -0.19
RFFL-204ENST00000414419 FOXN1O15353 648 aa13.83□□□□□ -0.2
RFFL-204ENST00000414419 ADORA1P30542 326 aa13.83□□□□□ -0.2
RFFL-204ENST00000414419 TNNI2P48788 182 aa13.83□□□□□ -0.2
RFFL-204ENST00000414419 CTCFP49711 727 aaPredicted RBP13.83□□□□□ -0.2
RFFL-204ENST00000414419 PRKG1Q13976 671 aa13.83□□□□□ -0.2
RFFL-204ENST00000414419 POLA2Q14181 598 aa13.83□□□□□ -0.2
RFFL-204ENST00000414419 GRIK5Q16478 980 aa13.83□□□□□ -0.2
RFFL-204ENST00000414419 SUPT20HL1Q3ZLR7 823 aa13.83□□□□□ -0.2
RFFL-204ENST00000414419 ZGPATQ8N5A5 531 aaKnown RBP13.83□□□□□ -0.2
RFFL-204ENST00000414419 SSH3Q8TE77 659 aa13.83□□□□□ -0.2
RFFL-204ENST00000414419 MRIQ9BWK5 157 aa13.83□□□□□ -0.2
RFFL-204ENST00000414419 TMOD2Q9NZR1 351 aa13.83□□□□□ -0.2
RFFL-204ENST00000414419 DDX19BQ9UMR2 479 aa13.83□□□□□ -0.2
RFFL-204ENST00000414419 AKAP11Q9UKA4 1901 aa13.83□□□□□ -0.2
RFFL-204ENST00000414419 THSD7BQ9C0I4 1608 aa13.82□□□□□ -0.2
RFFL-204ENST00000414419 AK9Q5TCS8 1911 aa13.82□□□□□ -0.2
RFFL-204ENST00000414419 UBE2Q2LH0YL09 131 aa13.82□□□□□ -0.2
RFFL-204ENST00000414419 PPP1R12BO60237 982 aaPredicted RBP13.82□□□□□ -0.2
RFFL-204ENST00000414419 LDHBP07195 334 aaKnown RBP13.82□□□□□ -0.2
RFFL-204ENST00000414419 SPDYE2Q495Y8 402 aa13.82□□□□□ -0.2
RFFL-204ENST00000414419 MOB2Q70IA6 237 aa13.82□□□□□ -0.2
RFFL-204ENST00000414419 TCP10L2B9ZVM9 353 aa13.81□□□□□ -0.2
RFFL-204ENST00000414419 RASA3Q14644 834 aa13.81□□□□□ -0.2
RFFL-204ENST00000414419 HHIPL2Q6UWX4 724 aa13.81□□□□□ -0.2
RFFL-204ENST00000414419 ZDHHC15Q96MV8 337 aa13.81□□□□□ -0.2
RFFL-204ENST00000414419 ANGEL1Q9UNK9 670 aaKnown RBP13.81□□□□□ -0.2
RFFL-204ENST00000414419 COG6Q9Y2V7 657 aa13.81□□□□□ -0.2
RFFL-204ENST00000414419 MYH2Q9UKX2 1941 aa13.81□□□□□ -0.2
RFFL-204ENST00000414419 SLC10A3P09131 477 aa13.8□□□□□ -0.2
RFFL-204ENST00000414419 SPTY2D1Q68D10 685 aaPredicted RBP13.8□□□□□ -0.2
RFFL-204ENST00000414419 CEP85Q6P2H3 762 aa13.8□□□□□ -0.2
RFFL-204ENST00000414419 ABCF2Q9UG63 623 aa13.8□□□□□ -0.2
RFFL-204ENST00000414419 AOX1Q06278 1338 aa13.8□□□□□ -0.2
RFFL-204ENST00000414419 SALL1Q9NSC2 1324 aa13.8□□□□□ -0.2
RFFL-204ENST00000414419 FAM155AB1AL88 458 aaPredicted RBP13.79□□□□□ -0.2
RFFL-204ENST00000414419 CA12O43570 354 aa13.79□□□□□ -0.2
RFFL-204ENST00000414419 UQCRFS1P1P0C7P4 283 aa13.79□□□□□ -0.2
RFFL-204ENST00000414419 PRDX5P30044 214 aa13.79□□□□□ -0.2
RFFL-204ENST00000414419 LBX1P52954 281 aa13.79□□□□□ -0.2
RFFL-204ENST00000414419 KIF23Q02241 960 aaPredicted RBP13.79□□□□□ -0.2
RFFL-204ENST00000414419 RASGRF1Q13972 1273 aa13.79□□□□□ -0.2
RFFL-204ENST00000414419 CCDC158Q5M9N0 1113 aa13.79□□□□□ -0.2
RFFL-204ENST00000414419 COL13A1Q5TAT6 717 aaPredicted RBP13.79□□□□□ -0.2
RFFL-204ENST00000414419 DZIP1Q86YF9 867 aaKnown RBP13.79□□□□□ -0.2
RFFL-204ENST00000414419 SLF2Q8IX21 1173 aa13.79□□□□□ -0.2
RFFL-204ENST00000414419 GPR108Q9NPR9 543 aa13.79□□□□□ -0.2
RFFL-204ENST00000414419 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.79□□□□□ -0.2
RFFL-204ENST00000414419 NOP58Q9Y2X3 529 aaKnown RBP13.79□□□□□ -0.2
RFFL-204ENST00000414419 PDS5AQ29RF7 1337 aaKnown RBP13.79□□□□□ -0.2
RFFL-204ENST00000414419 ZBTB22O15209 634 aa13.78□□□□□ -0.2
RFFL-204ENST00000414419 HMMRO75330 724 aa13.78□□□□□ -0.2
RFFL-204ENST00000414419 IREB2P48200 963 aaKnown RBP13.78□□□□□ -0.2
RFFL-204ENST00000414419 PDE3AQ14432 1141 aa13.78□□□□□ -0.2
RFFL-204ENST00000414419 HSP90AB4PQ58FF6 505 aa13.78□□□□□ -0.2
RFFL-204ENST00000414419 TNNI3KQ59H18 835 aa13.78□□□□□ -0.2
RFFL-204ENST00000414419 NBPF12Q5TAG4 269 aaPredicted RBP13.78□□□□□ -0.2
RFFL-204ENST00000414419 RASAL3Q86YV0 1011 aa13.78□□□□□ -0.2
RFFL-204ENST00000414419 ERC1Q8IUD2 1116 aa13.78□□□□□ -0.2
RFFL-204ENST00000414419 RPAP2Q8IXW5 612 aaPredicted RBP13.78□□□□□ -0.2
RFFL-204ENST00000414419 REM2Q8IYK8 340 aaPredicted RBP13.78□□□□□ -0.2
RFFL-204ENST00000414419 YTHDC1Q96MU7 727 aaKnown RBP13.78□□□□□ -0.2
RFFL-204ENST00000414419 ZIC5Q96T25 663 aa13.78□□□□□ -0.2
RFFL-204ENST00000414419 PRDM10Q9NQV6 1147 aa13.78□□□□□ -0.2
RFFL-204ENST00000414419 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.78□□□□□ -0.2
RFFL-204ENST00000414419 FPGT-TNNI3KV9GXZ4 949 aa13.78□□□□□ -0.2
RFFL-204ENST00000414419 HSPA8P11142 646 aaKnown RBP13.77□□□□□ -0.21
RFFL-204ENST00000414419 CACNB3P54284 484 aa13.77□□□□□ -0.21
RFFL-204ENST00000414419 DIXDC1Q155Q3 683 aa13.77□□□□□ -0.21
RFFL-204ENST00000414419 TTC39AQ5SRH9 613 aa13.77□□□□□ -0.21
RFFL-204ENST00000414419 APOBEC3HQ6NTF7 200 aaKnown RBP13.77□□□□□ -0.21
RFFL-204ENST00000414419 ERICH6Q7L0X2 663 aa13.77□□□□□ -0.21
RFFL-204ENST00000414419 SPATA5Q8NB90 893 aa13.77□□□□□ -0.21
RFFL-204ENST00000414419 SLC10A4Q96EP9 437 aa13.77□□□□□ -0.21
RFFL-204ENST00000414419 TMEM39BQ9GZU3 492 aa13.77□□□□□ -0.21
RFFL-204ENST00000414419 FZD1Q9UP38 647 aa13.77□□□□□ -0.21
RFFL-204ENST00000414419 DAGLAQ9Y4D2 1042 aa13.77□□□□□ -0.21
RFFL-204ENST00000414419 UNCXA6NJT0 531 aa13.76□□□□□ -0.21
RFFL-204ENST00000414419 ARID4AP29374 1257 aaPredicted RBP13.76□□□□□ -0.21
RFFL-204ENST00000414419 MAP3K11Q16584 847 aa13.76□□□□□ -0.21
RFFL-204ENST00000414419 LDLRAD1Q5T700 205 aa13.76□□□□□ -0.21
RFFL-204ENST00000414419 FKBP1CQ5VVH2 108 aa13.76□□□□□ -0.21
RFFL-204ENST00000414419 FAM83AQ86UY5 434 aa13.76□□□□□ -0.21
RFFL-204ENST00000414419 TNS4Q8IZW8 715 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms