RNA–Protein interactions for RNA: ENST00000413806.7

SMARCA4-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,512 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-202ENST00000413806 CCDC174Q6PII3 467 aa15.54■□□□□ 0.08
SMARCA4-202ENST00000413806 FERMT2Q96AC1 680 aa15.54■□□□□ 0.08
SMARCA4-202ENST00000413806 CCDC114Q96M63 670 aa15.54■□□□□ 0.08
SMARCA4-202ENST00000413806 KDM5AP29375 1690 aaKnown RBP15.53■□□□□ 0.08
SMARCA4-202ENST00000413806 GCP02774 474 aa15.53■□□□□ 0.08
SMARCA4-202ENST00000413806 PTGS1P23219 599 aa15.53■□□□□ 0.08
SMARCA4-202ENST00000413806 KIAA0753Q2KHM9 967 aa15.53■□□□□ 0.08
SMARCA4-202ENST00000413806 MAGEB6Q8N7X4 407 aa15.53■□□□□ 0.08
SMARCA4-202ENST00000413806 RRP36Q96EU6 259 aaKnown RBP15.53■□□□□ 0.08
SMARCA4-202ENST00000413806 MACROD2A1Z1Q3 448 aa15.53■□□□□ 0.08
SMARCA4-202ENST00000413806 G2E3Q7L622 706 aa15.53■□□□□ 0.08
SMARCA4-202ENST00000413806 ABCA5Q8WWZ7 1642 aa15.53■□□□□ 0.08
SMARCA4-202ENST00000413806 SLC27A2O14975 620 aa15.53■□□□□ 0.08
SMARCA4-202ENST00000413806 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.53■□□□□ 0.08
SMARCA4-202ENST00000413806 PLBD2Q8NHP8 589 aa15.52■□□□□ 0.08
SMARCA4-202ENST00000413806 LMBR1Q8WVP7 490 aa15.52■□□□□ 0.08
SMARCA4-202ENST00000413806 METTL22Q9BUU2 404 aaPredicted RBP15.52■□□□□ 0.08
SMARCA4-202ENST00000413806 ANKRD2Q9GZV1 360 aa15.52■□□□□ 0.08
SMARCA4-202ENST00000413806 TUBBP07437 444 aa15.52■□□□□ 0.08
SMARCA4-202ENST00000413806 KRT13P13646 458 aa15.52■□□□□ 0.08
SMARCA4-202ENST00000413806 SLC4A8Q2Y0W8 1093 aa15.52■□□□□ 0.08
SMARCA4-202ENST00000413806 SIRT1Q96EB6 747 aa15.52■□□□□ 0.08
SMARCA4-202ENST00000413806 TBX22Q9Y458 520 aa15.52■□□□□ 0.08
SMARCA4-202ENST00000413806 KIAA0232Q92628 1395 aa15.52■□□□□ 0.08
SMARCA4-202ENST00000413806 IFNKQ9P0W0 207 aa15.52■□□□□ 0.07
SMARCA4-202ENST00000413806 RASAL2Q9UJF2 1139 aa15.52■□□□□ 0.07
SMARCA4-202ENST00000413806 SNX14Q9Y5W7 946 aa15.52■□□□□ 0.07
SMARCA4-202ENST00000413806 CLNS1AP54105 237 aaKnown RBP15.52■□□□□ 0.07
SMARCA4-202ENST00000413806 TNNI3KQ59H18 835 aa15.52■□□□□ 0.07
SMARCA4-202ENST00000413806 ANKS4BQ8N8V4 417 aa15.52■□□□□ 0.07
SMARCA4-202ENST00000413806 SAMM50Q9Y512 469 aa15.52■□□□□ 0.07
SMARCA4-202ENST00000413806 FPGT-TNNI3KV9GXZ4 949 aa15.52■□□□□ 0.07
SMARCA4-202ENST00000413806 PTPRTO14522 1441 aa15.52■□□□□ 0.07
SMARCA4-202ENST00000413806 ARHGEF10O15013 1369 aa15.52■□□□□ 0.07
SMARCA4-202ENST00000413806 CCDC155Q8N6L0 562 aa15.51■□□□□ 0.07
SMARCA4-202ENST00000413806 TMEM87BQ96K49 555 aa15.51■□□□□ 0.07
SMARCA4-202ENST00000413806 PPP1R2P41236 205 aa15.51■□□□□ 0.07
SMARCA4-202ENST00000413806 MYL5Q02045 173 aa15.51■□□□□ 0.07
SMARCA4-202ENST00000413806 KRT79Q5XKE5 535 aa15.51■□□□□ 0.07
SMARCA4-202ENST00000413806 IQUBQ8NA54 791 aa15.51■□□□□ 0.07
SMARCA4-202ENST00000413806 GNA11P29992 359 aa15.51■□□□□ 0.07
SMARCA4-202ENST00000413806 KIF5AQ12840 1032 aa15.51■□□□□ 0.07
SMARCA4-202ENST00000413806 RNF216Q9NWF9 866 aaPredicted RBP15.51■□□□□ 0.07
SMARCA4-202ENST00000413806 FSD2A1L4K1 749 aa15.51■□□□□ 0.07
SMARCA4-202ENST00000413806 SGSM2O43147 1006 aa15.51■□□□□ 0.07
SMARCA4-202ENST00000413806 NAP1L4Q99733 375 aaKnown RBP15.51■□□□□ 0.07
SMARCA4-202ENST00000413806 C19orf44Q9H6X5 657 aa15.51■□□□□ 0.07
SMARCA4-202ENST00000413806 EYA2O00167 538 aa15.51■□□□□ 0.07
SMARCA4-202ENST00000413806 SETSIPP0DME0 302 aa15.51■□□□□ 0.07
SMARCA4-202ENST00000413806 U2AF2P26368 475 aaKnown RBP eCLIP15.51■□□□□ 0.07
SMARCA4-202ENST00000413806 HSP90AA4PQ58FG1 418 aa15.51■□□□□ 0.07
SMARCA4-202ENST00000413806 CHST3Q7LGC8 479 aa15.51■□□□□ 0.07
SMARCA4-202ENST00000413806 ZNF445P59923 1031 aa15.5■□□□□ 0.07
SMARCA4-202ENST00000413806 CNGA4Q8IV77 575 aa15.5■□□□□ 0.07
SMARCA4-202ENST00000413806 MPHOSPH6Q99547 160 aaKnown RBP15.5■□□□□ 0.07
SMARCA4-202ENST00000413806 IQSEC3Q9UPP2 1182 aaPredicted RBP15.5■□□□□ 0.07
SMARCA4-202ENST00000413806 CLSTN2Q9H4D0 955 aa15.5■□□□□ 0.07
SMARCA4-202ENST00000413806 RILPL1Q5EBL4 403 aa15.5■□□□□ 0.07
SMARCA4-202ENST00000413806 BANK1Q8NDB2 785 aa15.5■□□□□ 0.07
SMARCA4-202ENST00000413806 UBXN1Q04323 297 aa15.49■□□□□ 0.07
SMARCA4-202ENST00000413806 OTUD7AQ8TE49 926 aaPredicted RBP15.49■□□□□ 0.07
SMARCA4-202ENST00000413806 CCDC42Q96M95 316 aa15.49■□□□□ 0.07
SMARCA4-202ENST00000413806 DTHD1Q6ZMT9 781 aa15.49■□□□□ 0.07
SMARCA4-202ENST00000413806 TERF1P54274 439 aa15.49■□□□□ 0.07
SMARCA4-202ENST00000413806 CFAP57Q96MR6 1250 aa15.49■□□□□ 0.07
SMARCA4-202ENST00000413806 RBSNQ9H1K0 784 aa15.49■□□□□ 0.07
SMARCA4-202ENST00000413806 ARHGEF5Q12774 1597 aa15.49■□□□□ 0.07
SMARCA4-202ENST00000413806 MYCBPQ99417 103 aaPredicted RBP15.48■□□□□ 0.07
SMARCA4-202ENST00000413806 TSGA10Q9BZW7 698 aa15.48■□□□□ 0.07
SMARCA4-202ENST00000413806 DDB1Q16531 1140 aa15.48■□□□□ 0.07
SMARCA4-202ENST00000413806 BICD1Q96G01 975 aa15.48■□□□□ 0.07
SMARCA4-202ENST00000413806 MMRN2Q9H8L6 949 aa15.48■□□□□ 0.07
SMARCA4-202ENST00000413806 DENND2AQ9ULE3 1009 aa15.48■□□□□ 0.07
SMARCA4-202ENST00000413806 ZNF790Q6PG37 636 aa15.48■□□□□ 0.07
SMARCA4-202ENST00000413806 NEK11Q8NG66 645 aa15.48■□□□□ 0.07
SMARCA4-202ENST00000413806 SMARCC2Q8TAQ2 1214 aa15.48■□□□□ 0.07
SMARCA4-202ENST00000413806 MCM9Q9NXL9 1143 aa15.48■□□□□ 0.07
SMARCA4-202ENST00000413806 SBNO2Q9Y2G9 1366 aa15.48■□□□□ 0.07
SMARCA4-202ENST00000413806 WDHD1O75717 1129 aaPredicted RBP15.48■□□□□ 0.07
SMARCA4-202ENST00000413806 TPTE2Q6XPS3 522 aa15.48■□□□□ 0.07
SMARCA4-202ENST00000413806 FERMT1Q9BQL6 677 aa15.48■□□□□ 0.07
SMARCA4-202ENST00000413806 STMN4Q9H169 189 aaPredicted RBP15.48■□□□□ 0.07
SMARCA4-202ENST00000413806 SSH2Q76I76 1423 aa15.48■□□□□ 0.07
SMARCA4-202ENST00000413806 DEXIO95424 95 aa15.48■□□□□ 0.07
SMARCA4-202ENST00000413806 TRIM14Q14142 442 aa15.48■□□□□ 0.07
SMARCA4-202ENST00000413806 ARID4AP29374 1257 aaPredicted RBP15.47■□□□□ 0.07
SMARCA4-202ENST00000413806 ZNF622Q969S3 477 aaKnown RBP eCLIP15.47■□□□□ 0.072e-8■■□□□ 13.2
SMARCA4-202ENST00000413806 HDAC9Q9UKV0 1011 aa15.47■□□□□ 0.07
SMARCA4-202ENST00000413806 USP19O94966 1318 aa15.47■□□□□ 0.07
SMARCA4-202ENST00000413806 PHACTR2O75167 634 aa15.47■□□□□ 0.07
SMARCA4-202ENST00000413806 MCM7P33993 719 aa15.47■□□□□ 0.07
SMARCA4-202ENST00000413806 MAP2K2P36507 400 aa15.47■□□□□ 0.07
SMARCA4-202ENST00000413806 MIGA1Q8NAN2 632 aa15.47■□□□□ 0.07
SMARCA4-202ENST00000413806 MYRIPQ8NFW9 859 aa15.47■□□□□ 0.07
SMARCA4-202ENST00000413806 FMNL3Q8IVF7 1028 aa15.47■□□□□ 0.07
SMARCA4-202ENST00000413806 FAM76AQ8TAV0 307 aa15.47■□□□□ 0.07
SMARCA4-202ENST00000413806 ANO1Q5XXA6 986 aa15.47■□□□□ 0.07
SMARCA4-202ENST00000413806 HDXQ7Z353 690 aa15.47■□□□□ 0.07
SMARCA4-202ENST00000413806 ZNF219Q9P2Y4 722 aaPredicted RBP15.47■□□□□ 0.07
SMARCA4-202ENST00000413806 AKR1B15C9JRZ8 316 aaPredicted RBP15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 108.9 ms