RNA–Protein interactions for RNA: ENST00000411934.6

RPE-204, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 1 (best) BASIC

Gene RPE, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-204ENST00000411934 CDC37L1Q7L3B6 337 aa10.06□□□□□ -0.8
RPE-204ENST00000411934 SAMD7Q7Z3H4 446 aa10.06□□□□□ -0.8
RPE-204ENST00000411934 AACSQ86V21 672 aa10.06□□□□□ -0.8
RPE-204ENST00000411934 APOBEC3FQ8IUX4 373 aaKnown RBP10.06□□□□□ -0.8
RPE-204ENST00000411934 SPATA5Q8NB90 893 aa10.06□□□□□ -0.8
RPE-204ENST00000411934 TEKT1Q969V4 418 aa10.06□□□□□ -0.8
RPE-204ENST00000411934 DBNDD2Q9BQY9 259 aa10.06□□□□□ -0.8
RPE-204ENST00000411934 RWDD1Q9H446 243 aaPredicted RBP10.06□□□□□ -0.8
RPE-204ENST00000411934 TTF2Q9UNY4 1162 aaKnown RBP10.06□□□□□ -0.8
RPE-204ENST00000411934 PPP2R3BQ9Y5P8 575 aa10.06□□□□□ -0.8
RPE-204ENST00000411934 TRPM7Q96QT4 1865 aa10.05□□□□□ -0.8
RPE-204ENST00000411934 SPDYE2BA6NHP3 402 aa10.05□□□□□ -0.8
RPE-204ENST00000411934 MAP4K4O95819 1239 aaPredicted RBP10.05□□□□□ -0.8
RPE-204ENST00000411934 ITGBL1O95965 494 aaPredicted RBP10.05□□□□□ -0.8
RPE-204ENST00000411934 LDHBP07195 334 aaKnown RBP10.05□□□□□ -0.8
RPE-204ENST00000411934 IFIT2P09913 472 aaKnown RBP10.05□□□□□ -0.8
RPE-204ENST00000411934 POTEIP0CG38 1075 aa10.05□□□□□ -0.8
RPE-204ENST00000411934 POTEJP0CG39 1038 aa10.05□□□□□ -0.8
RPE-204ENST00000411934 SPDYE6P0CI01 402 aa10.05□□□□□ -0.8
RPE-204ENST00000411934 HSPA6P17066 643 aa10.05□□□□□ -0.8
RPE-204ENST00000411934 MCAMP43121 646 aa10.05□□□□□ -0.8
RPE-204ENST00000411934 CHAF1AQ13111 956 aaPredicted RBP10.05□□□□□ -0.8
RPE-204ENST00000411934 TNFAIP1Q13829 316 aa10.05□□□□□ -0.8
RPE-204ENST00000411934 TBC1D10BQ4KMP7 808 aaPredicted RBP10.05□□□□□ -0.8
RPE-204ENST00000411934 CERS3Q8IU89 383 aa10.05□□□□□ -0.8
RPE-204ENST00000411934 CNTROBQ8N137 903 aa10.05□□□□□ -0.8
RPE-204ENST00000411934 EXOC6Q8TAG9 804 aa10.05□□□□□ -0.8
RPE-204ENST00000411934 DCPSQ96C86 337 aaKnown RBP10.05□□□□□ -0.8
RPE-204ENST00000411934 GPATCH3Q96I76 525 aa10.05□□□□□ -0.8
RPE-204ENST00000411934 GGA3Q9NZ52 723 aa10.05□□□□□ -0.8
RPE-204ENST00000411934 HMG20BQ9P0W2 317 aa10.05□□□□□ -0.8
RPE-204ENST00000411934 IQSEC3Q9UPP2 1182 aaPredicted RBP10.05□□□□□ -0.8
RPE-204ENST00000411934 CLEC11AQ9Y240 323 aa10.05□□□□□ -0.8
RPE-204ENST00000411934 RPAP1Q9BWH6 1393 aaPredicted RBP10.04□□□□□ -0.8
RPE-204ENST00000411934 SHTN1A0MZ66 631 aa10.04□□□□□ -0.8
RPE-204ENST00000411934 PRDX5P30044 214 aa10.04□□□□□ -0.8
RPE-204ENST00000411934 CRKP46108 304 aa10.04□□□□□ -0.8
RPE-204ENST00000411934 APLP1P51693 650 aa10.04□□□□□ -0.8
RPE-204ENST00000411934 SCARF1Q14162 830 aa10.04□□□□□ -0.8
RPE-204ENST00000411934 TTF1Q15361 905 aaPredicted RBP10.04□□□□□ -0.8
RPE-204ENST00000411934 CFAP100Q494V2 611 aa10.04□□□□□ -0.8
RPE-204ENST00000411934 FKBP1CQ5VVH2 108 aa10.04□□□□□ -0.8
RPE-204ENST00000411934 SULF1Q8IWU6 871 aa10.04□□□□□ -0.8
RPE-204ENST00000411934 SMC5Q8IY18 1101 aa10.04□□□□□ -0.8
RPE-204ENST00000411934 FAM163AQ96GL9 167 aaPredicted RBP10.04□□□□□ -0.8
RPE-204ENST00000411934 ZDHHC15Q96MV8 337 aa10.04□□□□□ -0.8
RPE-204ENST00000411934 MXD3Q9BW11 206 aa10.04□□□□□ -0.8
RPE-204ENST00000411934 IL1RAPL2Q9NP60 686 aa10.04□□□□□ -0.8
RPE-204ENST00000411934 ZBTB47Q9UFB7 747 aaPredicted RBP10.04□□□□□ -0.8
RPE-204ENST00000411934 GAKO14976 1311 aa10.04□□□□□ -0.8
RPE-204ENST00000411934 TTC41PQ6P2S7 1318 aa10.04□□□□□ -0.8
RPE-204ENST00000411934 GABBR2O75899 941 aa10.03□□□□□ -0.8
RPE-204ENST00000411934 EGFRP00533 1210 aa10.03□□□□□ -0.8
RPE-204ENST00000411934 GSTO1P78417 241 aa10.03□□□□□ -0.8
RPE-204ENST00000411934 SPDYE2Q495Y8 402 aa10.03□□□□□ -0.8
RPE-204ENST00000411934 ERICH6Q7L0X2 663 aa10.03□□□□□ -0.8
RPE-204ENST00000411934 KRT26Q7Z3Y9 468 aa10.03□□□□□ -0.8
RPE-204ENST00000411934 CCDC8Q9H0W5 538 aaPredicted RBP10.03□□□□□ -0.8
RPE-204ENST00000411934 TLR7Q9NYK1 1049 aaKnown RBP10.03□□□□□ -0.8
RPE-204ENST00000411934 PAPPA2Q9BXP8 1791 aa10.02□□□□□ -0.81
RPE-204ENST00000411934 F8W031 263 aaPredicted RBP10.02□□□□□ -0.81
RPE-204ENST00000411934 LDHCP07864 332 aa10.02□□□□□ -0.81
RPE-204ENST00000411934 ATP5JP18859 108 aa10.02□□□□□ -0.81
RPE-204ENST00000411934 FKBP1BP68106 108 aa10.02□□□□□ -0.81
RPE-204ENST00000411934 NBPF9Q3BBW0 867 aa10.02□□□□□ -0.81
RPE-204ENST00000411934 ANGEL2Q5VTE6 544 aaKnown RBP10.02□□□□□ -0.81
RPE-204ENST00000411934 MAP1SQ66K74 1059 aaPredicted RBP10.02□□□□□ -0.81
RPE-204ENST00000411934 DZIP1Q86YF9 867 aaKnown RBP10.02□□□□□ -0.81
RPE-204ENST00000411934 CREBZFQ9NS37 354 aa10.02□□□□□ -0.81
RPE-204ENST00000411934 TMOD2Q9NZR1 351 aa10.02□□□□□ -0.81
RPE-204ENST00000411934 JAG2Q9Y219 1238 aa10.02□□□□□ -0.81
RPE-204ENST00000411934 MYH2Q9UKX2 1941 aa10.01□□□□□ -0.81
RPE-204ENST00000411934 TMEM88BA6NKF7 163 aa10.01□□□□□ -0.81
RPE-204ENST00000411934 ERC2O15083 957 aa10.01□□□□□ -0.81
RPE-204ENST00000411934 CYP2E1P05181 493 aaPredicted RBP10.01□□□□□ -0.81
RPE-204ENST00000411934 TNNI2P48788 182 aa10.01□□□□□ -0.81
RPE-204ENST00000411934 RBM5P52756 815 aaKnown RBP eCLIP10.01□□□□□ -0.81
RPE-204ENST00000411934 RBM26Q5T8P6 1007 aaKnown RBP10.01□□□□□ -0.81
RPE-204ENST00000411934 FAM83AQ86UY5 434 aa10.01□□□□□ -0.81
RPE-204ENST00000411934 TICAM2Q86XR7 235 aa10.01□□□□□ -0.81
RPE-204ENST00000411934 NSUN4Q96CB9 384 aaKnown RBP10.01□□□□□ -0.81
RPE-204ENST00000411934 HHIPL1Q96JK4 782 aa10.01□□□□□ -0.81
RPE-204ENST00000411934 ECHDC1Q9NTX5 307 aa10.01□□□□□ -0.81
RPE-204ENST00000411934 LRP2BPQ9P2M1 347 aa10.01□□□□□ -0.81
RPE-204ENST00000411934 ABCF2Q9UG63 623 aa10.01□□□□□ -0.81
RPE-204ENST00000411934 DAGLAQ9Y4D2 1042 aa10.01□□□□□ -0.81
RPE-204ENST00000411934 COL2A1P02458 1487 aaPredicted RBP10.01□□□□□ -0.81
RPE-204ENST00000411934 MROH7-TTC4A0A0A0MT08 1334 aa10.01□□□□□ -0.81
RPE-204ENST00000411934 AOX1Q06278 1338 aa10.01□□□□□ -0.81
RPE-204ENST00000411934 RFX7Q2KHR2 1363 aa10.01□□□□□ -0.81
RPE-204ENST00000411934 UNCXA6NJT0 531 aa10□□□□□ -0.81
RPE-204ENST00000411934 APBB1O00213 710 aa10□□□□□ -0.81
RPE-204ENST00000411934 PLCG2P16885 1265 aa10□□□□□ -0.81
RPE-204ENST00000411934 NF2P35240 595 aa10□□□□□ -0.81
RPE-204ENST00000411934 ZAP70P43403 619 aa10□□□□□ -0.81
RPE-204ENST00000411934 MECOMQ03112 1051 aa10□□□□□ -0.81
RPE-204ENST00000411934 MAP3K12Q12852 859 aa10□□□□□ -0.81
RPE-204ENST00000411934 GRIK5Q16478 980 aa10□□□□□ -0.81
RPE-204ENST00000411934 ERICH6BQ5W0A0 696 aa10□□□□□ -0.81
RPE-204ENST00000411934 APOBEC3HQ6NTF7 200 aaKnown RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms