RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 A0A1B0GVL5 298 aa18.52■□□□□ 0.56
HOXD3-202ENST00000410016 GOLGA6L19H0YKK7 550 aa18.52■□□□□ 0.56
HOXD3-202ENST00000410016 YEATS4O95619 227 aa18.52■□□□□ 0.56
HOXD3-202ENST00000410016 NDUFA8P51970 172 aa18.52■□□□□ 0.56
HOXD3-202ENST00000410016 TTF1Q15361 905 aaPredicted RBP18.52■□□□□ 0.56
HOXD3-202ENST00000410016 MYSM1Q5VVJ2 828 aa18.52■□□□□ 0.56
HOXD3-202ENST00000410016 TBC1D10CQ8IV04 446 aa18.52■□□□□ 0.56
HOXD3-202ENST00000410016 TSC1Q92574 1164 aa18.52■□□□□ 0.56
HOXD3-202ENST00000410016 MRFAP1L1Q96HT8 127 aa18.52■□□□□ 0.56
HOXD3-202ENST00000410016 ANO10Q9NW15 660 aa18.52■□□□□ 0.56
HOXD3-202ENST00000410016 BTG4Q9NY30 223 aa18.52■□□□□ 0.56
HOXD3-202ENST00000410016 TRMT112Q9UI30 125 aaKnown RBP18.52■□□□□ 0.56
HOXD3-202ENST00000410016 NEDD4P46934 1319 aa18.52■□□□□ 0.56
HOXD3-202ENST00000410016 KIF28PB7ZC32 967 aa18.52■□□□□ 0.55
HOXD3-202ENST00000410016 CCDC102BQ68D86 513 aa18.52■□□□□ 0.55
HOXD3-202ENST00000410016 BRAPQ7Z569 592 aa18.52■□□□□ 0.55
HOXD3-202ENST00000410016 MTERF4Q7Z6M4 381 aaKnown RBP18.52■□□□□ 0.55
HOXD3-202ENST00000410016 KCNG4Q8TDN1 519 aa18.52■□□□□ 0.55
HOXD3-202ENST00000410016 ERCC4Q92889 916 aaPredicted RBP18.52■□□□□ 0.55
HOXD3-202ENST00000410016 DDX60Q8IY21 1712 aaKnown RBP18.51■□□□□ 0.55
HOXD3-202ENST00000410016 CPLX1O14810 134 aa18.51■□□□□ 0.55
HOXD3-202ENST00000410016 ARID4AP29374 1257 aaPredicted RBP18.51■□□□□ 0.55
HOXD3-202ENST00000410016 PHKA1P46020 1223 aa18.51■□□□□ 0.55
HOXD3-202ENST00000410016 CYB5R4Q7L1T6 521 aa18.51■□□□□ 0.55
HOXD3-202ENST00000410016 RGS22Q8NE09 1264 aa18.51■□□□□ 0.55
HOXD3-202ENST00000410016 ANGEL1Q9UNK9 670 aaKnown RBP18.51■□□□□ 0.55
HOXD3-202ENST00000410016 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.5■□□□□ 0.55
HOXD3-202ENST00000410016 TCRBV5S4A2TA0A5A2 114 aa18.5■□□□□ 0.55
HOXD3-202ENST00000410016 PDE8AO60658 829 aa18.5■□□□□ 0.55
HOXD3-202ENST00000410016 KIF23Q02241 960 aaPredicted RBP18.5■□□□□ 0.55
HOXD3-202ENST00000410016 ZNF710Q8N1W2 664 aa18.5■□□□□ 0.55
HOXD3-202ENST00000410016 SPTLC2O15270 562 aa18.5■□□□□ 0.55
HOXD3-202ENST00000410016 IDH1O75874 414 aaKnown RBP18.5■□□□□ 0.55
HOXD3-202ENST00000410016 STK38Q15208 465 aa18.5■□□□□ 0.55
HOXD3-202ENST00000410016 ZNF532Q9HCE3 1301 aa18.5■□□□□ 0.55
HOXD3-202ENST00000410016 ERVV-1B6SEH8 477 aa18.49■□□□□ 0.55
HOXD3-202ENST00000410016 FGFR2P21802 821 aa18.49■□□□□ 0.55
HOXD3-202ENST00000410016 TRDNQ13061 729 aa18.49■□□□□ 0.55
HOXD3-202ENST00000410016 AXDND1Q5T1B0 1012 aaPredicted RBP18.49■□□□□ 0.55
HOXD3-202ENST00000410016 UBN2Q6ZU65 1347 aa18.49■□□□□ 0.55
HOXD3-202ENST00000410016 DISP2A7MBM2 1401 aa18.49■□□□□ 0.55
HOXD3-202ENST00000410016 MYH7P12883 1935 aa18.49■□□□□ 0.55
HOXD3-202ENST00000410016 SH2B2O14492 632 aaPredicted RBP18.49■□□□□ 0.55
HOXD3-202ENST00000410016 PDE6AP16499 860 aa18.49■□□□□ 0.55
HOXD3-202ENST00000410016 SDF4Q9BRK5 362 aa18.49■□□□□ 0.55
HOXD3-202ENST00000410016 WWC3Q9ULE0 1092 aa18.49■□□□□ 0.55
HOXD3-202ENST00000410016 LRP6O75581 1613 aa18.49■□□□□ 0.55
HOXD3-202ENST00000410016 BECN2A8MW95 431 aa18.48■□□□□ 0.55
HOXD3-202ENST00000410016 SF3A1Q15459 793 aaKnown RBP18.48■□□□□ 0.55
HOXD3-202ENST00000410016 LRRC8AQ8IWT6 810 aa18.48■□□□□ 0.55
HOXD3-202ENST00000410016 ZNF34Q8IZ26 560 aa18.48■□□□□ 0.55
HOXD3-202ENST00000410016 STRBPQ96SI9 672 aaKnown RBP18.48■□□□□ 0.55
HOXD3-202ENST00000410016 SENP2Q9HC62 589 aa18.48■□□□□ 0.55
HOXD3-202ENST00000410016 KIAA1468Q9P260 1216 aa18.48■□□□□ 0.55
HOXD3-202ENST00000410016 TBC1D2BQ9UPU7 963 aa18.48■□□□□ 0.55
HOXD3-202ENST00000410016 ZMYM6O95789 1325 aa18.48■□□□□ 0.55
HOXD3-202ENST00000410016 ITGB4P16144 1822 aa18.48■□□□□ 0.55
HOXD3-202ENST00000410016 ANO1Q5XXA6 986 aa18.48■□□□□ 0.55
HOXD3-202ENST00000410016 IGDCC4Q8TDY8 1250 aa18.48■□□□□ 0.55
HOXD3-202ENST00000410016 AIFM3Q96NN9 605 aa18.48■□□□□ 0.55
HOXD3-202ENST00000410016 ZMYND15Q9H091 742 aa18.48■□□□□ 0.55
HOXD3-202ENST00000410016 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.47■□□□□ 0.55
HOXD3-202ENST00000410016 RIOK3O14730 519 aaKnown RBP18.47■□□□□ 0.55
HOXD3-202ENST00000410016 CEP57L1Q8IYX8 460 aa18.47■□□□□ 0.55
HOXD3-202ENST00000410016 LPIN2Q92539 896 aa18.47■□□□□ 0.55
HOXD3-202ENST00000410016 APPP05067 770 aa18.47■□□□□ 0.55
HOXD3-202ENST00000410016 UQCRFS1P1P0C7P4 283 aa18.47■□□□□ 0.55
HOXD3-202ENST00000410016 CDC27P30260 824 aa18.47■□□□□ 0.55
HOXD3-202ENST00000410016 IL6STP40189 918 aaPredicted RBP18.47■□□□□ 0.55
HOXD3-202ENST00000410016 PUM3Q15397 648 aaKnown RBP18.47■□□□□ 0.55
HOXD3-202ENST00000410016 ALX1Q15699 326 aa18.47■□□□□ 0.55
HOXD3-202ENST00000410016 APOA5Q6Q788 366 aa18.47■□□□□ 0.55
HOXD3-202ENST00000410016 SYNE3Q6ZMZ3 975 aa18.47■□□□□ 0.55
HOXD3-202ENST00000410016 DZIP3Q86Y13 1208 aaKnown RBP18.47■□□□□ 0.55
HOXD3-202ENST00000410016 B4E1Z4 1266 aa18.46■□□□□ 0.55
HOXD3-202ENST00000410016 METAP2P50579 478 aaKnown RBP eCLIP18.46■□□□□ 0.55
HOXD3-202ENST00000410016 ARID5BQ14865 1188 aa18.46■□□□□ 0.55
HOXD3-202ENST00000410016 HELBQ8NG08 1087 aaPredicted RBP18.46■□□□□ 0.55
HOXD3-202ENST00000410016 FAM177BA6PVY3 158 aa18.46■□□□□ 0.55
HOXD3-202ENST00000410016 WDHD1O75717 1129 aaPredicted RBP18.46■□□□□ 0.55
HOXD3-202ENST00000410016 ZNF202O95125 648 aa18.46■□□□□ 0.55
HOXD3-202ENST00000410016 CMA1P23946 247 aa18.46■□□□□ 0.55
HOXD3-202ENST00000410016 CHAF1AQ13111 956 aaPredicted RBP18.46■□□□□ 0.55
HOXD3-202ENST00000410016 NTRK3Q16288 839 aa18.46■□□□□ 0.55
HOXD3-202ENST00000410016 AOPEPQ8N6M6 819 aa18.46■□□□□ 0.55
HOXD3-202ENST00000410016 NAT10Q9H0A0 1025 aaKnown RBP18.46■□□□□ 0.55
HOXD3-202ENST00000410016 MROH5Q6ZUA9 1318 aa18.45■□□□□ 0.54
HOXD3-202ENST00000410016 STRCQ7RTU9 1775 aa18.45■□□□□ 0.54
HOXD3-202ENST00000410016 RXRAP19793 462 aa18.45■□□□□ 0.54
HOXD3-202ENST00000410016 RBM6P78332 1123 aaKnown RBP18.45■□□□□ 0.54
HOXD3-202ENST00000410016 SLC39A14Q15043 492 aa18.45■□□□□ 0.54
HOXD3-202ENST00000410016 DPCR1Q3MIW9 517 aa18.45■□□□□ 0.54
HOXD3-202ENST00000410016 TMEM87BQ96K49 555 aa18.45■□□□□ 0.54
HOXD3-202ENST00000410016 ALG1Q9BT22 464 aa18.45■□□□□ 0.54
HOXD3-202ENST00000410016 INCENPQ9NQS7 918 aa18.45■□□□□ 0.54
HOXD3-202ENST00000410016 FAM217BQ9NTX9 383 aaPredicted RBP18.45■□□□□ 0.54
HOXD3-202ENST00000410016 C4AP0C0L4 1744 aa18.45■□□□□ 0.54
HOXD3-202ENST00000410016 C4BP0C0L5 1744 aa18.45■□□□□ 0.54
HOXD3-202ENST00000410016 SGMS1Q86VZ5 419 aa18.45■□□□□ 0.54
HOXD3-202ENST00000410016 BPIFA3Q9BQP9 254 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms