RNA–Protein interactions for RNA: ENST00000405692.2

PDGFA-204, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 5

Gene PDGFA, Length 663 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-204ENST00000405692 COL1A1P02452 1464 aaPredicted RBP25.55■■□□□ 1.68
PDGFA-204ENST00000405692 CLASRPQ8N2M8 674 aaKnown RBP25.55■■□□□ 1.68
PDGFA-204ENST00000405692 PRMT6Q96LA8 375 aaPredicted RBP25.55■■□□□ 1.68
PDGFA-204ENST00000405692 AAMPQ13685 434 aa25.54■■□□□ 1.68
PDGFA-204ENST00000405692 GRIK5Q16478 980 aa25.54■■□□□ 1.68
PDGFA-204ENST00000405692 HHIPL2Q6UWX4 724 aa25.54■■□□□ 1.68
PDGFA-204ENST00000405692 SPATA5Q8NB90 893 aa25.54■■□□□ 1.68
PDGFA-204ENST00000405692 DBNDD2Q9BQY9 259 aa25.54■■□□□ 1.68
PDGFA-204ENST00000405692 TRPM7Q96QT4 1865 aa25.53■■□□□ 1.68
PDGFA-204ENST00000405692 C2orf69Q8N8R5 385 aa25.53■■□□□ 1.68
PDGFA-204ENST00000405692 EAF2Q96CJ1 260 aaPredicted RBP25.53■■□□□ 1.68
PDGFA-204ENST00000405692 CDCA5Q96FF9 252 aa25.53■■□□□ 1.68
PDGFA-204ENST00000405692 ZNF512BQ96KM6 892 aaPredicted RBP25.53■■□□□ 1.68
PDGFA-204ENST00000405692 PPP2R3BQ9Y5P8 575 aa25.53■■□□□ 1.68
PDGFA-204ENST00000405692 NF2P35240 595 aa25.52■■□□□ 1.68
PDGFA-204ENST00000405692 TNFAIP1Q13829 316 aa25.52■■□□□ 1.68
PDGFA-204ENST00000405692 DEFB115Q30KQ5 88 aa25.52■■□□□ 1.68
PDGFA-204ENST00000405692 AACSQ86V21 672 aa25.52■■□□□ 1.68
PDGFA-204ENST00000405692 SLF2Q8IX21 1173 aa25.52■■□□□ 1.68
PDGFA-204ENST00000405692 ZDHHC15Q96MV8 337 aa25.52■■□□□ 1.68
PDGFA-204ENST00000405692 CRBNQ96SW2 442 aa25.52■■□□□ 1.68
PDGFA-204ENST00000405692 CCDC8Q9H0W5 538 aaPredicted RBP25.52■■□□□ 1.68
PDGFA-204ENST00000405692 VEZTQ9HBM0 779 aa25.52■■□□□ 1.68
PDGFA-204ENST00000405692 HMG20BQ9P0W2 317 aa25.52■■□□□ 1.68
PDGFA-204ENST00000405692 ABCF2Q9UG63 623 aa25.52■■□□□ 1.68
PDGFA-204ENST00000405692 TLL2Q9Y6L7 1015 aa25.52■■□□□ 1.68
PDGFA-204ENST00000405692 RASSF10A6NK89 507 aa25.51■■□□□ 1.67
PDGFA-204ENST00000405692 APBB1O00213 710 aa25.51■■□□□ 1.67
PDGFA-204ENST00000405692 PRDX5P30044 214 aa25.51■■□□□ 1.67
PDGFA-204ENST00000405692 GBA2Q9HCG7 927 aaPredicted RBP25.51■■□□□ 1.67
PDGFA-204ENST00000405692 MKRN1Q9UHC7 482 aaKnown RBP25.51■■□□□ 1.67
PDGFA-204ENST00000405692 DBNLQ9UJU6 430 aaKnown RBP25.51■■□□□ 1.67
PDGFA-204ENST00000405692 PCDHAC2Q9Y5I4 1007 aa25.51■■□□□ 1.67
PDGFA-204ENST00000405692 CNTNAP1P78357 1384 aa25.51■■□□□ 1.67
PDGFA-204ENST00000405692 CLRN2A0PK11 232 aa25.5■■□□□ 1.67
PDGFA-204ENST00000405692 POLR2AP24928 1970 aaKnown RBP25.5■■□□□ 1.67
PDGFA-204ENST00000405692 SPDYE2Q495Y8 402 aa25.5■■□□□ 1.67
PDGFA-204ENST00000405692 ERICH6Q7L0X2 663 aa25.5■■□□□ 1.67
PDGFA-204ENST00000405692 IL1RAPL2Q9NP60 686 aa25.5■■□□□ 1.67
PDGFA-204ENST00000405692 TMOD2Q9NZR1 351 aa25.5■■□□□ 1.67
PDGFA-204ENST00000405692 IFIT2P09913 472 aaKnown RBP25.49■■□□□ 1.67
PDGFA-204ENST00000405692 MCAMP43121 646 aa25.49■■□□□ 1.67
PDGFA-204ENST00000405692 FKBP1BP68106 108 aa25.49■■□□□ 1.67
PDGFA-204ENST00000405692 DLK2Q6UY11 383 aa25.49■■□□□ 1.67
PDGFA-204ENST00000405692 SAPCD2Q86UD0 394 aa25.49■■□□□ 1.67
PDGFA-204ENST00000405692 DZIP1Q86YF9 867 aaKnown RBP25.49■■□□□ 1.67
PDGFA-204ENST00000405692 HHIPL1Q96JK4 782 aa25.49■■□□□ 1.67
PDGFA-204ENST00000405692 DEFB129Q9H1M3 183 aa25.49■■□□□ 1.67
PDGFA-204ENST00000405692 TDRD3Q9H7E2 651 aaKnown RBP25.49■■□□□ 1.67
PDGFA-204ENST00000405692 ZNF70Q9UC06 446 aaPredicted RBP25.49■■□□□ 1.67
PDGFA-204ENST00000405692 TNNI2P48788 182 aa25.48■■□□□ 1.67
PDGFA-204ENST00000405692 LRRCC1Q9C099 1032 aa25.48■■□□□ 1.67
PDGFA-204ENST00000405692 IGSF3O75054 1194 aa25.47■■□□□ 1.67
PDGFA-204ENST00000405692 ECE1P42892 770 aa25.47■■□□□ 1.67
PDGFA-204ENST00000405692 SCAF8Q9UPN6 1271 aaKnown RBP25.47■■□□□ 1.67
PDGFA-204ENST00000405692 SUPT16HQ9Y5B9 1047 aaKnown RBP25.47■■□□□ 1.67
PDGFA-204ENST00000405692 ECM29Q5VYK3 1845 aa25.47■■□□□ 1.67
PDGFA-204ENST00000405692 GSTO1P78417 241 aa25.46■■□□□ 1.67
PDGFA-204ENST00000405692 APOBEC3HQ6NTF7 200 aaKnown RBP25.46■■□□□ 1.67
PDGFA-204ENST00000405692 DCTPP1Q9H773 170 aa25.46■■□□□ 1.67
PDGFA-204ENST00000405692 TLR7Q9NYK1 1049 aaKnown RBP25.46■■□□□ 1.67
PDGFA-204ENST00000405692 HUNKP57058 714 aa25.45■■□□□ 1.66
PDGFA-204ENST00000405692 DIXDC1Q155Q3 683 aa25.45■■□□□ 1.66
PDGFA-204ENST00000405692 SUPT20HL1Q3ZLR7 823 aa25.45■■□□□ 1.66
PDGFA-204ENST00000405692 PI16Q6UXB8 463 aa25.45■■□□□ 1.66
PDGFA-204ENST00000405692 PAXIP1Q6ZW49 1069 aaPredicted RBP25.45■■□□□ 1.66
PDGFA-204ENST00000405692 LRP2BPQ9P2M1 347 aa25.45■■□□□ 1.66
PDGFA-204ENST00000405692 DAGLAQ9Y4D2 1042 aa25.45■■□□□ 1.66
PDGFA-204ENST00000405692 PCDHB15Q9Y5E8 787 aa25.45■■□□□ 1.66
PDGFA-204ENST00000405692 LDHCP07864 332 aa25.44■■□□□ 1.66
PDGFA-204ENST00000405692 FKBP1CQ5VVH2 108 aa25.44■■□□□ 1.66
PDGFA-204ENST00000405692 PRAMEF18Q5VWM3 479 aa25.44■■□□□ 1.66
PDGFA-204ENST00000405692 JMYQ8N9B5 988 aa25.44■■□□□ 1.66
PDGFA-204ENST00000405692 RAI14Q9P0K7 980 aa25.44■■□□□ 1.66
PDGFA-204ENST00000405692 RASA3Q14644 834 aa25.43■■□□□ 1.66
PDGFA-204ENST00000405692 FAM163AQ96GL9 167 aaPredicted RBP25.43■■□□□ 1.66
PDGFA-204ENST00000405692 SNRKQ9NRH2 765 aa25.43■■□□□ 1.66
PDGFA-204ENST00000405692 AOX1Q06278 1338 aa25.42■■□□□ 1.66
PDGFA-204ENST00000405692 TCP10L2B9ZVM9 353 aa25.42■■□□□ 1.66
PDGFA-204ENST00000405692 VEGFBP49765 207 aa25.42■■□□□ 1.66
PDGFA-204ENST00000405692 MECOMQ03112 1051 aa25.42■■□□□ 1.66
PDGFA-204ENST00000405692 TTLL12Q14166 644 aaPredicted RBP25.42■■□□□ 1.66
PDGFA-204ENST00000405692 TBC1D9Q6ZT07 1266 aa25.42■■□□□ 1.66
PDGFA-204ENST00000405692 BCL11AQ9H165 835 aa25.42■■□□□ 1.66
PDGFA-204ENST00000405692 GAKO14976 1311 aa25.41■■□□□ 1.66
PDGFA-204ENST00000405692 ZAP70P43403 619 aa25.41■■□□□ 1.66
PDGFA-204ENST00000405692 ARMC9Q7Z3E5 817 aa25.41■■□□□ 1.66
PDGFA-204ENST00000405692 FAM83AQ86UY5 434 aa25.41■■□□□ 1.66
PDGFA-204ENST00000405692 WDR33Q9C0J8 1336 aaKnown RBP25.4■■□□□ 1.66
PDGFA-204ENST00000405692 PPP1R12BO60237 982 aaPredicted RBP25.4■■□□□ 1.66
PDGFA-204ENST00000405692 CYP2E1P05181 493 aaPredicted RBP25.4■■□□□ 1.66
PDGFA-204ENST00000405692 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.4■■□□□ 1.66
PDGFA-204ENST00000405692 NSUN4Q96CB9 384 aaKnown RBP25.4■■□□□ 1.66
PDGFA-204ENST00000405692 CAPNS2Q96L46 248 aa25.4■■□□□ 1.66
PDGFA-204ENST00000405692 MROH7-TTC4A0A0A0MT08 1334 aa25.39■■□□□ 1.66
PDGFA-204ENST00000405692 PAPPA2Q9BXP8 1791 aa25.39■■□□□ 1.66
PDGFA-204ENST00000405692 RGMBQ6NW40 437 aa25.39■■□□□ 1.66
PDGFA-204ENST00000405692 USP40Q9NVE5 1235 aa25.39■■□□□ 1.66
PDGFA-204ENST00000405692 TTF1Q15361 905 aaPredicted RBP25.38■■□□□ 1.65
PDGFA-204ENST00000405692 CYP4F22Q6NT55 531 aa25.38■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms