RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 HIP1RO75146 1068 aa11.25□□□□□ -0.61
PTPRM-203ENST00000400060 RAPGEF3O95398 923 aa11.25□□□□□ -0.61
PTPRM-203ENST00000400060 CPLX3Q8WVH0 158 aa11.25□□□□□ -0.61
PTPRM-203ENST00000400060 HNRNPLLQ8WVV9 542 aaKnown RBP11.25□□□□□ -0.61
PTPRM-203ENST00000400060 BRF1Q92994 677 aa11.25□□□□□ -0.61
PTPRM-203ENST00000400060 NRBP1Q9UHY1 535 aa11.25□□□□□ -0.61
PTPRM-203ENST00000400060 E7EVH7 732 aa11.25□□□□□ -0.61
PTPRM-203ENST00000400060 TADA3O75528 432 aa11.25□□□□□ -0.61
PTPRM-203ENST00000400060 DESP17661 470 aa11.25□□□□□ -0.61
PTPRM-203ENST00000400060 TRIM58Q8NG06 486 aa11.25□□□□□ -0.61
PTPRM-203ENST00000400060 BPIFA3Q9BQP9 254 aa11.25□□□□□ -0.61
PTPRM-203ENST00000400060 SIL1Q9H173 461 aa11.25□□□□□ -0.61
PTPRM-203ENST00000400060 N4BP3O15049 544 aa11.24□□□□□ -0.61
PTPRM-203ENST00000400060 TXNDC2Q86VQ3 553 aa11.24□□□□□ -0.61
PTPRM-203ENST00000400060 MLKLQ8NB16 471 aa11.24□□□□□ -0.61
PTPRM-203ENST00000400060 L2HGDHQ9H9P8 463 aa11.24□□□□□ -0.61
PTPRM-203ENST00000400060 AACSQ86V21 672 aa11.24□□□□□ -0.61
PTPRM-203ENST00000400060 RNF216Q9NWF9 866 aaPredicted RBP11.24□□□□□ -0.61
PTPRM-203ENST00000400060 ADAMTS12P58397 1594 aa11.24□□□□□ -0.61
PTPRM-203ENST00000400060 DUOX2Q9NRD8 1548 aa11.24□□□□□ -0.61
PTPRM-203ENST00000400060 KIAA0556O60303 1618 aa11.24□□□□□ -0.61
PTPRM-203ENST00000400060 RPS6KA5O75582 802 aa11.24□□□□□ -0.61
PTPRM-203ENST00000400060 ZBTB17Q13105 803 aa11.24□□□□□ -0.61
PTPRM-203ENST00000400060 SNX14Q9Y5W7 946 aa11.24□□□□□ -0.61
PTPRM-203ENST00000400060 ZFYVE9O95405 1425 aa11.24□□□□□ -0.61
PTPRM-203ENST00000400060 GSPT1P15170 499 aaKnown RBP11.24□□□□□ -0.61
PTPRM-203ENST00000400060 RBM26Q5T8P6 1007 aaKnown RBP11.24□□□□□ -0.61
PTPRM-203ENST00000400060 ISM2Q6H9L7 571 aa11.24□□□□□ -0.61
PTPRM-203ENST00000400060 NYAP1Q6ZVC0 841 aa11.24□□□□□ -0.61
PTPRM-203ENST00000400060 ARHGAP18Q8N392 663 aa11.24□□□□□ -0.61
PTPRM-203ENST00000400060 SLC24A3Q9HC58 644 aa11.24□□□□□ -0.61
PTPRM-203ENST00000400060 KLC4Q9NSK0 619 aa11.24□□□□□ -0.61
PTPRM-203ENST00000400060 RASAL2Q9UJF2 1139 aa11.24□□□□□ -0.61
PTPRM-203ENST00000400060 CHRM1P11229 460 aaPredicted RBP11.23□□□□□ -0.61
PTPRM-203ENST00000400060 ATP8B2P98198 1209 aa11.23□□□□□ -0.61
PTPRM-203ENST00000400060 C8orf74Q6P047 294 aa11.23□□□□□ -0.61
PTPRM-203ENST00000400060 TEX9Q8N6V9 391 aa11.23□□□□□ -0.61
PTPRM-203ENST00000400060 C14orf93Q9H972 538 aaKnown RBP11.23□□□□□ -0.61
PTPRM-203ENST00000400060 HOMER3Q9NSC5 361 aa11.23□□□□□ -0.61
PTPRM-203ENST00000400060 FHOD1Q9Y613 1164 aa11.23□□□□□ -0.61
PTPRM-203ENST00000400060 CCDC61Q9Y6R9 512 aa11.23□□□□□ -0.61
PTPRM-203ENST00000400060 CEP104O60308 925 aa11.23□□□□□ -0.61
PTPRM-203ENST00000400060 CCDC178Q5BJE1 867 aa11.23□□□□□ -0.61
PTPRM-203ENST00000400060 PARP9Q8IXQ6 854 aa11.23□□□□□ -0.61
PTPRM-203ENST00000400060 DDX27Q96GQ7 796 aaKnown RBP11.23□□□□□ -0.61
PTPRM-203ENST00000400060 OSBPL3Q9H4L5 887 aa11.23□□□□□ -0.61
PTPRM-203ENST00000400060 CAPRIN2Q6IMN6 1127 aaKnown RBP11.23□□□□□ -0.61
PTPRM-203ENST00000400060 CCDC170Q8IYT3 715 aa11.23□□□□□ -0.61
PTPRM-203ENST00000400060 SPAG5Q96R06 1193 aa11.23□□□□□ -0.61
PTPRM-203ENST00000400060 CD109Q6YHK3 1445 aa11.23□□□□□ -0.61
PTPRM-203ENST00000400060 DNAJC8O75937 253 aaPredicted RBP11.23□□□□□ -0.61
PTPRM-203ENST00000400060 RASSF2P50749 326 aa11.23□□□□□ -0.61
PTPRM-203ENST00000400060 CCDC63Q8NA47 563 aa11.23□□□□□ -0.61
PTPRM-203ENST00000400060 CHCHD3Q9NX63 227 aaKnown RBP11.23□□□□□ -0.61
PTPRM-203ENST00000400060 SOS1Q07889 1333 aaPredicted RBP11.22□□□□□ -0.61
PTPRM-203ENST00000400060 HNRNPH1P31943 449 aaKnown RBP11.22□□□□□ -0.61
PTPRM-203ENST00000400060 PSMD7P51665 324 aa11.22□□□□□ -0.61
PTPRM-203ENST00000400060 EPHB4P54760 987 aa11.22□□□□□ -0.61
PTPRM-203ENST00000400060 CCDC92Q53HC0 331 aaPredicted RBP11.22□□□□□ -0.61
PTPRM-203ENST00000400060 SND1Q7KZF4 910 aaKnown RBP eCLIP11.22□□□□□ -0.61
PTPRM-203ENST00000400060 VPS36Q86VN1 386 aa11.22□□□□□ -0.61
PTPRM-203ENST00000400060 RAB11FIP4Q86YS3 637 aa11.22□□□□□ -0.61
PTPRM-203ENST00000400060 JARID2Q92833 1246 aaPredicted RBP11.22□□□□□ -0.61
PTPRM-203ENST00000400060 IL1RAPL2Q9NP60 686 aa11.22□□□□□ -0.61
PTPRM-203ENST00000400060 NSFL1CQ9UNZ2 370 aaKnown RBP11.22□□□□□ -0.61
PTPRM-203ENST00000400060 SAR1BQ9Y6B6 198 aa11.22□□□□□ -0.61
PTPRM-203ENST00000400060 PLCH2O75038 1416 aa11.22□□□□□ -0.61
PTPRM-203ENST00000400060 ABCC4O15439 1325 aa11.22□□□□□ -0.61
PTPRM-203ENST00000400060 NECAB1Q8N987 351 aa11.22□□□□□ -0.61
PTPRM-203ENST00000400060 PPP1R12BO60237 982 aaPredicted RBP11.22□□□□□ -0.61
PTPRM-203ENST00000400060 ALDH3A1P30838 453 aa11.22□□□□□ -0.61
PTPRM-203ENST00000400060 PLA2G4AP47712 749 aa11.22□□□□□ -0.61
PTPRM-203ENST00000400060 SLC8A3P57103 927 aa11.22□□□□□ -0.61
PTPRM-203ENST00000400060 RAPGEF4Q8WZA2 1011 aa11.22□□□□□ -0.61
PTPRM-203ENST00000400060 MOV10L1Q9BXT6 1211 aaKnown RBP11.22□□□□□ -0.61
PTPRM-203ENST00000400060 ETAA1Q9NY74 926 aa11.22□□□□□ -0.61
PTPRM-203ENST00000400060 RBM8AQ9Y5S9 174 aaKnown RBP11.22□□□□□ -0.61
PTPRM-203ENST00000400060 MSL3Q8N5Y2 521 aaKnown RBP11.21□□□□□ -0.61
PTPRM-203ENST00000400060 KCND1Q9NSA2 647 aa11.21□□□□□ -0.61
PTPRM-203ENST00000400060 WWC3Q9ULE0 1092 aa11.21□□□□□ -0.61
PTPRM-203ENST00000400060 PHLDB2Q86SQ0 1253 aa11.21□□□□□ -0.61
PTPRM-203ENST00000400060 PNMA8AQ86V59 439 aaPredicted RBP11.21□□□□□ -0.61
PTPRM-203ENST00000400060 GUCA1BQ9UMX6 200 aa11.21□□□□□ -0.61
PTPRM-203ENST00000400060 A0A1W2PQ27 194 aa11.21□□□□□ -0.61
PTPRM-203ENST00000400060 A0A1W2PQ64 194 aa11.21□□□□□ -0.61
PTPRM-203ENST00000400060 A0A1W2PQD8 194 aa11.21□□□□□ -0.61
PTPRM-203ENST00000400060 PPP1R7Q15435 360 aa11.21□□□□□ -0.61
PTPRM-203ENST00000400060 CLUL1Q15846 466 aa11.21□□□□□ -0.61
PTPRM-203ENST00000400060 CCDC122Q5T0U0 273 aa11.21□□□□□ -0.61
PTPRM-203ENST00000400060 NUTM2GQ5VZR2 741 aa11.21□□□□□ -0.61
PTPRM-203ENST00000400060 INTS8Q75QN2 995 aaKnown RBP11.21□□□□□ -0.61
PTPRM-203ENST00000400060 IGSF22Q8N9C0 903 aa11.21□□□□□ -0.61
PTPRM-203ENST00000400060 KIAA1468Q9P260 1216 aa11.21□□□□□ -0.61
PTPRM-203ENST00000400060 USH1CQ9Y6N9 552 aa11.21□□□□□ -0.61
PTPRM-203ENST00000400060 EIF4G3O43432 1585 aaKnown RBP11.21□□□□□ -0.62
PTPRM-203ENST00000400060 PPIP5K1Q6PFW1 1433 aa11.21□□□□□ -0.62
PTPRM-203ENST00000400060 MYOM2P54296 1465 aa11.21□□□□□ -0.62
PTPRM-203ENST00000400060 BCORL1Q5H9F3 1711 aa11.21□□□□□ -0.62
PTPRM-203ENST00000400060 CFAP73A6NFT4 308 aa11.21□□□□□ -0.62
PTPRM-203ENST00000400060 ZNF526Q8TF50 670 aaPredicted RBP11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms