RNA–Protein interactions for RNA: ENST00000399295.2

SMIM11A-202, Transcript of small integral membrane protein 11A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMIM11A, Length 1,074 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-202ENST00000399295 APBB1O00213 710 aa21.44■■□□□ 1.02
SMIM11A-202ENST00000399295 RAB11FIP3O75154 756 aa21.44■■□□□ 1.02
SMIM11A-202ENST00000399295 CELF2O95319 508 aaKnown RBP21.44■■□□□ 1.02
SMIM11A-202ENST00000399295 HDLBPQ00341 1268 aaKnown RBP21.44■■□□□ 1.02
SMIM11A-202ENST00000399295 CCDC158Q5M9N0 1113 aa21.44■■□□□ 1.02
SMIM11A-202ENST00000399295 CST9Q5W186 159 aa21.44■■□□□ 1.02
SMIM11A-202ENST00000399295 KIF1BPQ96EK5 621 aa21.44■■□□□ 1.02
SMIM11A-202ENST00000399295 POLR2AP24928 1970 aaKnown RBP21.44■■□□□ 1.02
SMIM11A-202ENST00000399295 MYO1BO43795 1136 aa21.43■■□□□ 1.02
SMIM11A-202ENST00000399295 UQCRFS1P1P0C7P4 283 aa21.43■■□□□ 1.02
SMIM11A-202ENST00000399295 ARID4AP29374 1257 aaPredicted RBP21.43■■□□□ 1.02
SMIM11A-202ENST00000399295 CRKP46108 304 aa21.43■■□□□ 1.02
SMIM11A-202ENST00000399295 CCDC8Q9H0W5 538 aaPredicted RBP21.43■■□□□ 1.02
SMIM11A-202ENST00000399295 ZNF408Q9H9D4 720 aa21.43■■□□□ 1.02
SMIM11A-202ENST00000399295 IL1RAPL2Q9NP60 686 aa21.43■■□□□ 1.02
SMIM11A-202ENST00000399295 DBNLQ9UJU6 430 aaKnown RBP21.43■■□□□ 1.02
SMIM11A-202ENST00000399295 MAST3O60307 1309 aa21.43■■□□□ 1.02
SMIM11A-202ENST00000399295 PDS5AQ29RF7 1337 aaKnown RBP21.43■■□□□ 1.02
SMIM11A-202ENST00000399295 SALL1Q9NSC2 1324 aa21.43■■□□□ 1.02
SMIM11A-202ENST00000399295 LDHBP07195 334 aaKnown RBP21.42■■□□□ 1.02
SMIM11A-202ENST00000399295 TTC39AQ5SRH9 613 aa21.42■■□□□ 1.02
SMIM11A-202ENST00000399295 AACSQ86V21 672 aa21.42■■□□□ 1.02
SMIM11A-202ENST00000399295 ZGPATQ8N5A5 531 aaKnown RBP21.42■■□□□ 1.02
SMIM11A-202ENST00000399295 JMYQ8N9B5 988 aa21.42■■□□□ 1.02
SMIM11A-202ENST00000399295 SPATA5Q8NB90 893 aa21.42■■□□□ 1.02
SMIM11A-202ENST00000399295 TEKT1Q969V4 418 aa21.42■■□□□ 1.02
SMIM11A-202ENST00000399295 MRIQ9BWK5 157 aa21.42■■□□□ 1.02
SMIM11A-202ENST00000399295 HMG20BQ9P0W2 317 aa21.42■■□□□ 1.02
SMIM11A-202ENST00000399295 SCAF8Q9UPN6 1271 aaKnown RBP21.42■■□□□ 1.02
SMIM11A-202ENST00000399295 PCDHB15Q9Y5E8 787 aa21.42■■□□□ 1.02
SMIM11A-202ENST00000399295 PRDX5P30044 214 aa21.41■■□□□ 1.02
SMIM11A-202ENST00000399295 CENPQQ7L2Z9 268 aaPredicted RBP21.41■■□□□ 1.02
SMIM11A-202ENST00000399295 APOBEC3FQ8IUX4 373 aaKnown RBP21.41■■□□□ 1.02
SMIM11A-202ENST00000399295 TLR7Q9NYK1 1049 aaKnown RBP21.41■■□□□ 1.02
SMIM11A-202ENST00000399295 CLRN2A0PK11 232 aa21.4■■□□□ 1.02
SMIM11A-202ENST00000399295 CLASRPQ8N2M8 674 aaKnown RBP21.4■■□□□ 1.02
SMIM11A-202ENST00000399295 CDCA5Q96FF9 252 aa21.4■■□□□ 1.02
SMIM11A-202ENST00000399295 HHIPL1Q96JK4 782 aa21.4■■□□□ 1.02
SMIM11A-202ENST00000399295 ABCF2Q9UG63 623 aa21.4■■□□□ 1.02
SMIM11A-202ENST00000399295 ABT1Q9ULW3 272 aaKnown RBP21.4■■□□□ 1.02
SMIM11A-202ENST00000399295 AOX1Q06278 1338 aa21.39■■□□□ 1.01
SMIM11A-202ENST00000399295 MCAMP43121 646 aa21.39■■□□□ 1.01
SMIM11A-202ENST00000399295 SPTY2D1Q68D10 685 aaPredicted RBP21.39■■□□□ 1.01
SMIM11A-202ENST00000399295 HHIPL2Q6UWX4 724 aa21.39■■□□□ 1.01
SMIM11A-202ENST00000399295 PI16Q6UXB8 463 aa21.39■■□□□ 1.01
SMIM11A-202ENST00000399295 ZNF512BQ96KM6 892 aaPredicted RBP21.39■■□□□ 1.01
SMIM11A-202ENST00000399295 ZDHHC15Q96MV8 337 aa21.39■■□□□ 1.01
SMIM11A-202ENST00000399295 BCL11AQ9H165 835 aa21.39■■□□□ 1.01
SMIM11A-202ENST00000399295 VEZTQ9HBM0 779 aa21.39■■□□□ 1.01
SMIM11A-202ENST00000399295 RASSF10A6NK89 507 aa21.38■■□□□ 1.01
SMIM11A-202ENST00000399295 DEFB115Q30KQ5 88 aa21.38■■□□□ 1.01
SMIM11A-202ENST00000399295 RWDD1Q9H446 243 aaPredicted RBP21.38■■□□□ 1.01
SMIM11A-202ENST00000399295 DCTPP1Q9H773 170 aa21.38■■□□□ 1.01
SMIM11A-202ENST00000399295 TDRD3Q9H7E2 651 aaKnown RBP21.38■■□□□ 1.01
SMIM11A-202ENST00000399295 MKRN1Q9UHC7 482 aaKnown RBP21.38■■□□□ 1.01
SMIM11A-202ENST00000399295 CNTNAP1P78357 1384 aa21.37■■□□□ 1.01
SMIM11A-202ENST00000399295 MYH13Q9UKX3 1938 aa21.37■■□□□ 1.01
SMIM11A-202ENST00000399295 IFIT2P09913 472 aaKnown RBP21.37■■□□□ 1.01
SMIM11A-202ENST00000399295 DIXDC1Q155Q3 683 aa21.37■■□□□ 1.01
SMIM11A-202ENST00000399295 SPDYE2Q495Y8 402 aa21.37■■□□□ 1.01
SMIM11A-202ENST00000399295 PRAMEF18Q5VWM3 479 aa21.37■■□□□ 1.01
SMIM11A-202ENST00000399295 LRRCC1Q9C099 1032 aa21.37■■□□□ 1.01
SMIM11A-202ENST00000399295 DEFB129Q9H1M3 183 aa21.37■■□□□ 1.01
SMIM11A-202ENST00000399295 SNRKQ9NRH2 765 aa21.37■■□□□ 1.01
SMIM11A-202ENST00000399295 ZNF70Q9UC06 446 aaPredicted RBP21.37■■□□□ 1.01
SMIM11A-202ENST00000399295 TLL2Q9Y6L7 1015 aa21.37■■□□□ 1.01
SMIM11A-202ENST00000399295 APOBEC3HQ6NTF7 200 aaKnown RBP21.36■■□□□ 1.01
SMIM11A-202ENST00000399295 TBC1D9Q6ZT07 1266 aa21.36■■□□□ 1.01
SMIM11A-202ENST00000399295 ERICH6Q7L0X2 663 aa21.36■■□□□ 1.01
SMIM11A-202ENST00000399295 DZIP1Q86YF9 867 aaKnown RBP21.36■■□□□ 1.01
SMIM11A-202ENST00000399295 C2orf69Q8N8R5 385 aa21.36■■□□□ 1.01
SMIM11A-202ENST00000399295 ECE1P42892 770 aa21.35■■□□□ 1.01
SMIM11A-202ENST00000399295 SAPCD2Q86UD0 394 aa21.35■■□□□ 1.01
SMIM11A-202ENST00000399295 GBA2Q9HCG7 927 aaPredicted RBP21.35■■□□□ 1.01
SMIM11A-202ENST00000399295 DAGLAQ9Y4D2 1042 aa21.35■■□□□ 1.01
SMIM11A-202ENST00000399295 HDAC1Q13547 482 aaPredicted RBP21.34■■□□□ 1.01
SMIM11A-202ENST00000399295 TNFAIP1Q13829 316 aa21.34■■□□□ 1.01
SMIM11A-202ENST00000399295 SLF2Q8IX21 1173 aa21.34■■□□□ 1.01
SMIM11A-202ENST00000399295 PPP2R3BQ9Y5P8 575 aa21.34■■□□□ 1.01
SMIM11A-202ENST00000399295 SMARCA5O60264 1052 aaPredicted RBP21.33■■□□□ 1.01
SMIM11A-202ENST00000399295 FKBP1BP68106 108 aa21.33■■□□□ 1.01
SMIM11A-202ENST00000399295 MECOMQ03112 1051 aa21.33■■□□□ 1.01
SMIM11A-202ENST00000399295 RASA3Q14644 834 aa21.33■■□□□ 1.01
SMIM11A-202ENST00000399295 TMOD2Q9NZR1 351 aa21.33■■□□□ 1.01
SMIM11A-202ENST00000399295 RAI14Q9P0K7 980 aa21.33■■□□□ 1.01
SMIM11A-202ENST00000399295 LRP2BPQ9P2M1 347 aa21.33■■□□□ 1.01
SMIM11A-202ENST00000399295 TCP10L2B9ZVM9 353 aa21.32■■□□□ 1
SMIM11A-202ENST00000399295 CYP2E1P05181 493 aaPredicted RBP21.32■■□□□ 1
SMIM11A-202ENST00000399295 NF2P35240 595 aa21.32■■□□□ 1
SMIM11A-202ENST00000399295 ZAP70P43403 619 aa21.32■■□□□ 1
SMIM11A-202ENST00000399295 HUNKP57058 714 aa21.32■■□□□ 1
SMIM11A-202ENST00000399295 TNNI2P48788 182 aa21.31■■□□□ 1
SMIM11A-202ENST00000399295 VEGFBP49765 207 aa21.31■■□□□ 1
SMIM11A-202ENST00000399295 CACNB3P54284 484 aa21.31■■□□□ 1
SMIM11A-202ENST00000399295 PAXIP1Q6ZW49 1069 aaPredicted RBP21.31■■□□□ 1
SMIM11A-202ENST00000399295 FAM163AQ96GL9 167 aaPredicted RBP21.31■■□□□ 1
SMIM11A-202ENST00000399295 GSTO1P78417 241 aa21.3■■□□□ 1
SMIM11A-202ENST00000399295 FKBP1CQ5VVH2 108 aa21.3■■□□□ 1
SMIM11A-202ENST00000399295 CDC42EP5Q6NZY7 148 aa21.3■■□□□ 1
SMIM11A-202ENST00000399295 NSUN4Q96CB9 384 aaKnown RBP21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms