RNA–Protein interactions for RNA: ENST00000398145.6

HPS4-202, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS4, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-202ENST00000398145 CUTAO60888 179 aa12.55□□□□□ -0.4
HPS4-202ENST00000398145 CCDC122Q5T0U0 273 aa12.55□□□□□ -0.4
HPS4-202ENST00000398145 LRRC59Q96AG4 307 aaKnown RBP12.55□□□□□ -0.4
HPS4-202ENST00000398145 POGZQ7Z3K3 1410 aa12.55□□□□□ -0.4
HPS4-202ENST00000398145 VAV2P52735 878 aa12.54□□□□□ -0.4
HPS4-202ENST00000398145 ZNF444Q8N0Y2 327 aaPredicted RBP12.54□□□□□ -0.4
HPS4-202ENST00000398145 PSDA5PKW4 1024 aaPredicted RBP12.54□□□□□ -0.4
HPS4-202ENST00000398145 TSPY2A6NKD2 308 aa12.54□□□□□ -0.4
HPS4-202ENST00000398145 TMEM87AQ8NBN3 555 aa12.54□□□□□ -0.4
HPS4-202ENST00000398145 SUCLG2Q96I99 432 aa12.54□□□□□ -0.4
HPS4-202ENST00000398145 KIF2CQ99661 725 aa12.54□□□□□ -0.4
HPS4-202ENST00000398145 A0A0D9SFI3 127 aa12.54□□□□□ -0.4
HPS4-202ENST00000398145 EFCAB8A8MWE9 144 aa12.54□□□□□ -0.4
HPS4-202ENST00000398145 INCENPQ9NQS7 918 aa12.54□□□□□ -0.4
HPS4-202ENST00000398145 ANGEL1Q9UNK9 670 aaKnown RBP12.54□□□□□ -0.4
HPS4-202ENST00000398145 MTX1Q13505 466 aa12.54□□□□□ -0.4
HPS4-202ENST00000398145 MYSM1Q5VVJ2 828 aa12.54□□□□□ -0.4
HPS4-202ENST00000398145 SPECC1LQ69YQ0 1117 aa12.54□□□□□ -0.4
HPS4-202ENST00000398145 AFAP1L1Q8TED9 768 aa12.54□□□□□ -0.4
HPS4-202ENST00000398145 RNMTO43148 476 aaKnown RBP12.53□□□□□ -0.4
HPS4-202ENST00000398145 ZEB2O60315 1214 aa12.53□□□□□ -0.4
HPS4-202ENST00000398145 IFIT1BQ5T764 474 aaKnown RBP12.53□□□□□ -0.4
HPS4-202ENST00000398145 NFATC2IPQ8NCF5 419 aa12.53□□□□□ -0.4
HPS4-202ENST00000398145 MAP4K1Q92918 833 aa12.53□□□□□ -0.4
HPS4-202ENST00000398145 EAF2Q96CJ1 260 aaPredicted RBP12.53□□□□□ -0.4
HPS4-202ENST00000398145 TEX13AQ9BXU3 409 aaPredicted RBP12.53□□□□□ -0.4
HPS4-202ENST00000398145 PBRM1Q86U86 1689 aa12.53□□□□□ -0.4
HPS4-202ENST00000398145 GCOM1H8Y6P7 765 aaPredicted RBP12.53□□□□□ -0.4
HPS4-202ENST00000398145 POLR2DO15514 142 aaKnown RBP12.53□□□□□ -0.4
HPS4-202ENST00000398145 MYZAPP0CAP1 466 aa12.53□□□□□ -0.4
HPS4-202ENST00000398145 ATP5JP18859 108 aa12.53□□□□□ -0.4
HPS4-202ENST00000398145 CDC25BP30305 580 aa12.53□□□□□ -0.4
HPS4-202ENST00000398145 CCT6AP40227 531 aaKnown RBP12.53□□□□□ -0.4
HPS4-202ENST00000398145 DNAJC21Q5F1R6 531 aaKnown RBP12.53□□□□□ -0.4
HPS4-202ENST00000398145 SLC4A4Q9Y6R1 1079 aa12.53□□□□□ -0.4
HPS4-202ENST00000398145 PTCH1Q13635 1447 aa12.53□□□□□ -0.4
HPS4-202ENST00000398145 CEBPAP49715 358 aaPredicted RBP12.53□□□□□ -0.4
HPS4-202ENST00000398145 ARFGAP2Q8N6H7 521 aa12.53□□□□□ -0.4
HPS4-202ENST00000398145 TNRQ92752 1358 aa12.53□□□□□ -0.4
HPS4-202ENST00000398145 PDE4BQ07343 736 aa12.52□□□□□ -0.4
HPS4-202ENST00000398145 BRD3Q15059 726 aa12.52□□□□□ -0.4
HPS4-202ENST00000398145 PLCD3Q8N3E9 789 aa12.52□□□□□ -0.4
HPS4-202ENST00000398145 EDC3Q96F86 508 aaKnown RBP12.52□□□□□ -0.4
HPS4-202ENST00000398145 IFI16Q16666 785 aaKnown RBP12.52□□□□□ -0.4
HPS4-202ENST00000398145 KAT14Q9H8E8 782 aa12.52□□□□□ -0.4
HPS4-202ENST00000398145 MMRN2Q9H8L6 949 aa12.52□□□□□ -0.4
HPS4-202ENST00000398145 ZDHHC9Q9Y397 364 aa12.52□□□□□ -0.4
HPS4-202ENST00000398145 NDUFB9Q9Y6M9 179 aa12.52□□□□□ -0.4
HPS4-202ENST00000398145 KRT28Q7Z3Y7 464 aa12.52□□□□□ -0.41
HPS4-202ENST00000398145 DZIP1Q86YF9 867 aaKnown RBP12.52□□□□□ -0.41
HPS4-202ENST00000398145 TMTC1Q8IUR5 882 aa12.52□□□□□ -0.41
HPS4-202ENST00000398145 TMEM87BQ96K49 555 aa12.52□□□□□ -0.41
HPS4-202ENST00000398145 VGLL3A8MV65 326 aa12.52□□□□□ -0.41
HPS4-202ENST00000398145 RBM6P78332 1123 aaKnown RBP12.52□□□□□ -0.41
HPS4-202ENST00000398145 TRIM14Q14142 442 aa12.52□□□□□ -0.41
HPS4-202ENST00000398145 IP6K1Q92551 441 aa12.52□□□□□ -0.41
HPS4-202ENST00000398145 METTL22Q9BUU2 404 aaPredicted RBP12.52□□□□□ -0.41
HPS4-202ENST00000398145 TAOK3Q9H2K8 898 aa12.52□□□□□ -0.41
HPS4-202ENST00000398145 LGR6Q9HBX8 967 aa12.52□□□□□ -0.41
HPS4-202ENST00000398145 SPTLC3Q9NUV7 552 aa12.52□□□□□ -0.41
HPS4-202ENST00000398145 EYA2O00167 538 aa12.51□□□□□ -0.41
HPS4-202ENST00000398145 NF2P35240 595 aa12.51□□□□□ -0.41
HPS4-202ENST00000398145 EIF4A1P60842 406 aaKnown RBP12.51□□□□□ -0.41
HPS4-202ENST00000398145 PRPF4BQ13523 1007 aaKnown RBP12.51□□□□□ -0.41
HPS4-202ENST00000398145 PPM1EQ8WY54 764 aa12.51□□□□□ -0.41
HPS4-202ENST00000398145 ZNF274Q96GC6 653 aaPredicted RBP12.51□□□□□ -0.41
HPS4-202ENST00000398145 VPS16Q9H269 839 aa12.51□□□□□ -0.41
HPS4-202ENST00000398145 CABP5Q9NP86 173 aa12.51□□□□□ -0.41
HPS4-202ENST00000398145 MYOM2P54296 1465 aa12.51□□□□□ -0.41
HPS4-202ENST00000398145 PFKFB2O60825 505 aa12.51□□□□□ -0.41
HPS4-202ENST00000398145 DIS3L2Q8IYB7 885 aaKnown RBP12.51□□□□□ -0.41
HPS4-202ENST00000398145 SPAG5Q96R06 1193 aa12.51□□□□□ -0.41
HPS4-202ENST00000398145 UBA5Q9GZZ9 404 aa12.51□□□□□ -0.41
HPS4-202ENST00000398145 MKRN1Q9UHC7 482 aaKnown RBP12.51□□□□□ -0.41
HPS4-202ENST00000398145 ATP2C2O75185 946 aa12.51□□□□□ -0.41
HPS4-202ENST00000398145 PFKFB1P16118 471 aa12.51□□□□□ -0.41
HPS4-202ENST00000398145 KRT2P35908 639 aa12.51□□□□□ -0.41
HPS4-202ENST00000398145 ASIC1P78348 528 aa12.51□□□□□ -0.41
HPS4-202ENST00000398145 TCERG1LQ5VWI1 586 aa12.51□□□□□ -0.41
HPS4-202ENST00000398145 KRT40Q6A162 431 aa12.51□□□□□ -0.41
HPS4-202ENST00000398145 CYP26C1Q6V0L0 522 aa12.51□□□□□ -0.41
HPS4-202ENST00000398145 NEK11Q8NG66 645 aa12.51□□□□□ -0.41
HPS4-202ENST00000398145 APPBP2Q92624 585 aa12.51□□□□□ -0.41
HPS4-202ENST00000398145 DSCC1Q9BVC3 393 aa12.51□□□□□ -0.41
HPS4-202ENST00000398145 GOLGA6L10A0A0M3HER8 536 aa12.51□□□□□ -0.41
HPS4-202ENST00000398145 E7EWF7 191 aa12.51□□□□□ -0.41
HPS4-202ENST00000398145 LRRC27Q9C0I9 530 aa12.51□□□□□ -0.41
HPS4-202ENST00000398145 PCDHA7Q9UN72 937 aa12.51□□□□□ -0.41
HPS4-202ENST00000398145 TRPM2O94759 1503 aa12.5□□□□□ -0.41
HPS4-202ENST00000398145 CYP2E1P05181 493 aaPredicted RBP12.5□□□□□ -0.41
HPS4-202ENST00000398145 CYP7A1P22680 504 aa12.5□□□□□ -0.41
HPS4-202ENST00000398145 KRT9P35527 623 aa12.5□□□□□ -0.41
HPS4-202ENST00000398145 POSTNQ15063 836 aa12.5□□□□□ -0.41
HPS4-202ENST00000398145 CFAP58Q5T655 872 aa12.5□□□□□ -0.41
HPS4-202ENST00000398145 B4E1Z4 1266 aa12.5□□□□□ -0.41
HPS4-202ENST00000398145 CALML3P27482 149 aa12.5□□□□□ -0.41
HPS4-202ENST00000398145 GCKRQ14397 625 aa12.5□□□□□ -0.41
HPS4-202ENST00000398145 TICAM2Q86XR7 235 aa12.5□□□□□ -0.41
HPS4-202ENST00000398145 ZNF652Q9Y2D9 606 aa12.5□□□□□ -0.41
HPS4-202ENST00000398145 PPP2R2CQ9Y2T4 447 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms