RNA–Protein interactions for RNA: ENST00000397766.3

PGBD4-201, Transcript of piggyBac transposable element derived 4, humanhuman

APPRIS P1 BASIC

Gene PGBD4, Length 6,612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4-201ENST00000397766 SV2BQ7L1I2 683 aa7.03□□□□□ -1.28
PGBD4-201ENST00000397766 TICAM2Q86XR7 235 aa7.03□□□□□ -1.28
PGBD4-201ENST00000397766 EXOC7Q9UPT5 735 aa7.03□□□□□ -1.28
PGBD4-201ENST00000397766 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.03□□□□□ -1.28
PGBD4-201ENST00000397766 ZNF608Q9ULD9 1512 aaPredicted RBP7.03□□□□□ -1.28
PGBD4-201ENST00000397766 IQCDQ96DY2 449 aa7.03□□□□□ -1.28
PGBD4-201ENST00000397766 MYCNP04198 464 aaPredicted RBP7.02□□□□□ -1.28
PGBD4-201ENST00000397766 MXRA7P84157 204 aa7.02□□□□□ -1.28
PGBD4-201ENST00000397766 ISM2Q6H9L7 571 aa7.02□□□□□ -1.28
PGBD4-201ENST00000397766 CROCCP2Q86T23 111 aa7.02□□□□□ -1.28
PGBD4-201ENST00000397766 NBPF11Q86T75 865 aa7.02□□□□□ -1.28
PGBD4-201ENST00000397766 SIRT1Q96EB6 747 aa7.02□□□□□ -1.28
PGBD4-201ENST00000397766 TIGD1Q96MW7 591 aa7.02□□□□□ -1.28
PGBD4-201ENST00000397766 RTCBQ9Y3I0 505 aaKnown RBP7.02□□□□□ -1.28
PGBD4-201ENST00000397766 ABCC10Q5T3U5 1492 aa7.02□□□□□ -1.29
PGBD4-201ENST00000397766 CALUO43852 315 aaPredicted RBP7.02□□□□□ -1.29
PGBD4-201ENST00000397766 EPB41P11171 864 aaKnown RBP7.02□□□□□ -1.29
PGBD4-201ENST00000397766 EEF2P13639 858 aaKnown RBP7.02□□□□□ -1.29
PGBD4-201ENST00000397766 C8orf58Q8NAV2 365 aa7.02□□□□□ -1.29
PGBD4-201ENST00000397766 DDX23Q9BUQ8 820 aaKnown RBP7.02□□□□□ -1.29
PGBD4-201ENST00000397766 MCM9Q9NXL9 1143 aa7.02□□□□□ -1.29
PGBD4-201ENST00000397766 LUC7L2Q9Y383 392 aaKnown RBP7.02□□□□□ -1.29
PGBD4-201ENST00000397766 DEXIO95424 95 aa7.02□□□□□ -1.29
PGBD4-201ENST00000397766 AK2P54819 239 aa7.02□□□□□ -1.29
PGBD4-201ENST00000397766 DNM1Q05193 864 aaKnown RBP7.02□□□□□ -1.29
PGBD4-201ENST00000397766 CCDC6Q16204 474 aa7.02□□□□□ -1.29
PGBD4-201ENST00000397766 HAUS3Q68CZ6 603 aa7.02□□□□□ -1.29
PGBD4-201ENST00000397766 CCDC121Q6ZUS5 278 aa7.02□□□□□ -1.29
PGBD4-201ENST00000397766 CCDC50Q8IVM0 306 aa7.02□□□□□ -1.29
PGBD4-201ENST00000397766 MAGEB6Q8N7X4 407 aa7.02□□□□□ -1.29
PGBD4-201ENST00000397766 HOOK2Q96ED9 719 aa7.02□□□□□ -1.29
PGBD4-201ENST00000397766 USP21Q9UK80 565 aa7.02□□□□□ -1.29
PGBD4-201ENST00000397766 FRMD4BQ9Y2L6 1034 aa7.02□□□□□ -1.29
PGBD4-201ENST00000397766 YTHDC2Q9H6S0 1430 aaKnown RBP7.02□□□□□ -1.29
PGBD4-201ENST00000397766 A6NNZ2 444 aa7.02□□□□□ -1.29
PGBD4-201ENST00000397766 MARCKSP29966 332 aaPredicted RBP7.02□□□□□ -1.29
PGBD4-201ENST00000397766 TFCP2Q12800 502 aa7.02□□□□□ -1.29
PGBD4-201ENST00000397766 CALCOCO2Q13137 446 aa7.02□□□□□ -1.29
PGBD4-201ENST00000397766 CHRNA2Q15822 529 aa7.02□□□□□ -1.29
PGBD4-201ENST00000397766 TUBB8Q3ZCM7 444 aa7.02□□□□□ -1.29
PGBD4-201ENST00000397766 CNNM4Q6P4Q7 775 aa7.02□□□□□ -1.29
PGBD4-201ENST00000397766 DHX37Q8IY37 1157 aaKnown RBP7.02□□□□□ -1.29
PGBD4-201ENST00000397766 RNMTO43148 476 aaKnown RBP7.02□□□□□ -1.29
PGBD4-201ENST00000397766 FAM160A1Q05DH4 1040 aa7.02□□□□□ -1.29
PGBD4-201ENST00000397766 CCDC26Q8TAB7 109 aa7.02□□□□□ -1.29
PGBD4-201ENST00000397766 INSRP06213 1382 aa7.02□□□□□ -1.29
PGBD4-201ENST00000397766 GAS8O95995 478 aa7.01□□□□□ -1.29
PGBD4-201ENST00000397766 WDR44Q5JSH3 913 aa7.01□□□□□ -1.29
PGBD4-201ENST00000397766 LZTS2Q9BRK4 669 aa7.01□□□□□ -1.29
PGBD4-201ENST00000397766 ZC3H12CQ9C0D7 883 aaKnown RBP7.01□□□□□ -1.29
PGBD4-201ENST00000397766 ATP6V0A2Q9Y487 856 aa7.01□□□□□ -1.29
PGBD4-201ENST00000397766 MYL5Q02045 173 aa7.01□□□□□ -1.29
PGBD4-201ENST00000397766 SETDB1Q15047 1291 aa7.01□□□□□ -1.29
PGBD4-201ENST00000397766 ZNF354CQ86Y25 554 aa7.01□□□□□ -1.29
PGBD4-201ENST00000397766 GPR161Q8N6U8 529 aaKnown RBP7.01□□□□□ -1.29
PGBD4-201ENST00000397766 JDP2Q8WYK2 163 aa7.01□□□□□ -1.29
PGBD4-201ENST00000397766 TTF2Q9UNY4 1162 aaKnown RBP7.01□□□□□ -1.29
PGBD4-201ENST00000397766 EIF4G3O43432 1585 aaKnown RBP7.01□□□□□ -1.29
PGBD4-201ENST00000397766 KIF24Q5T7B8 1368 aa7.01□□□□□ -1.29
PGBD4-201ENST00000397766 CHMLP26374 656 aa7.01□□□□□ -1.29
PGBD4-201ENST00000397766 CFAP58Q5T655 872 aa7.01□□□□□ -1.29
PGBD4-201ENST00000397766 CCDC110Q8TBZ0 833 aa7.01□□□□□ -1.29
PGBD4-201ENST00000397766 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.01□□□□□ -1.29
PGBD4-201ENST00000397766 NUP58Q9BVL2 599 aa7.01□□□□□ -1.29
PGBD4-201ENST00000397766 POLKQ9UBT6 870 aa7.01□□□□□ -1.29
PGBD4-201ENST00000397766 AKR1B15C9JRZ8 316 aaPredicted RBP7.01□□□□□ -1.29
PGBD4-201ENST00000397766 VAMP4O75379 141 aa7.01□□□□□ -1.29
PGBD4-201ENST00000397766 CCDC117Q8IWD4 279 aaPredicted RBP7.01□□□□□ -1.29
PGBD4-201ENST00000397766 OTUD6BQ8N6M0 293 aa7.01□□□□□ -1.29
PGBD4-201ENST00000397766 PLBD2Q8NHP8 589 aa7.01□□□□□ -1.29
PGBD4-201ENST00000397766 GABPB2Q8TAK5 448 aaPredicted RBP7.01□□□□□ -1.29
PGBD4-201ENST00000397766 TCHPQ9BT92 498 aa7.01□□□□□ -1.29
PGBD4-201ENST00000397766 SAMD15Q9P1V8 674 aa7.01□□□□□ -1.29
PGBD4-201ENST00000397766 PCDHB15Q9Y5E8 787 aa7.01□□□□□ -1.29
PGBD4-201ENST00000397766 SYCP2Q9BX26 1530 aa7.01□□□□□ -1.29
PGBD4-201ENST00000397766 NPC1L1Q9UHC9 1359 aa7.01□□□□□ -1.29
PGBD4-201ENST00000397766 MCM7P33993 719 aa7.01□□□□□ -1.29
PGBD4-201ENST00000397766 APOBRQ0VD83 1088 aa7.01□□□□□ -1.29
PGBD4-201ENST00000397766 LRRC2Q9BYS8 371 aa7.01□□□□□ -1.29
PGBD4-201ENST00000397766 SMTNP53814 917 aa7.01□□□□□ -1.29
PGBD4-201ENST00000397766 PPP1R7Q15435 360 aa7.01□□□□□ -1.29
PGBD4-201ENST00000397766 LIN9Q5TKA1 542 aa7.01□□□□□ -1.29
PGBD4-201ENST00000397766 HDXQ7Z353 690 aa7.01□□□□□ -1.29
PGBD4-201ENST00000397766 RGS22Q8NE09 1264 aa7.01□□□□□ -1.29
PGBD4-201ENST00000397766 IP6K1Q92551 441 aa7.01□□□□□ -1.29
PGBD4-201ENST00000397766 ZSWIM4Q9H7M6 989 aa7.01□□□□□ -1.29
PGBD4-201ENST00000397766 TXNDC16Q9P2K2 825 aa7.01□□□□□ -1.29
PGBD4-201ENST00000397766 FAM169AQ9Y6X4 670 aa7.01□□□□□ -1.29
PGBD4-201ENST00000397766 STX10O60499 249 aa7□□□□□ -1.29
PGBD4-201ENST00000397766 RPS6KB1P23443 525 aa7□□□□□ -1.29
PGBD4-201ENST00000397766 MAP7D1Q3KQU3 841 aa7□□□□□ -1.29
PGBD4-201ENST00000397766 C8orf34Q49A92 452 aa7□□□□□ -1.29
PGBD4-201ENST00000397766 CCDC63Q8NA47 563 aa7□□□□□ -1.29
PGBD4-201ENST00000397766 C19orf44Q9H6X5 657 aa7□□□□□ -1.29
PGBD4-201ENST00000397766 ZBTB40Q9NUA8 1239 aa7□□□□□ -1.29
PGBD4-201ENST00000397766 KCNG1Q9UIX4 513 aa7□□□□□ -1.29
PGBD4-201ENST00000397766 PUM3Q15397 648 aaKnown RBP7□□□□□ -1.29
PGBD4-201ENST00000397766 SELENOSQ9BQE4 189 aa7□□□□□ -1.29
PGBD4-201ENST00000397766 MAK16Q9BXY0 300 aaKnown RBP7□□□□□ -1.29
PGBD4-201ENST00000397766 SBNO1A3KN83 1393 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms