RNA–Protein interactions for RNA: ENST00000397043.7

ATP2A3-206, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2A3, Length 3,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-206ENST00000397043 SALL1Q9NSC2 1324 aa18.46■□□□□ 0.54
ATP2A3-206ENST00000397043 XPO4Q9C0E2 1151 aaKnown RBP18.45■□□□□ 0.54
ATP2A3-206ENST00000397043 FOXP2O15409 715 aa18.45■□□□□ 0.54
ATP2A3-206ENST00000397043 ANO1Q5XXA6 986 aa18.45■□□□□ 0.54
ATP2A3-206ENST00000397043 HPS5Q9UPZ3 1129 aa18.45■□□□□ 0.54
ATP2A3-206ENST00000397043 PHRF1Q9P1Y6 1649 aaKnown RBP18.44■□□□□ 0.54
ATP2A3-206ENST00000397043 TPM4P67936 248 aa18.44■□□□□ 0.54
ATP2A3-206ENST00000397043 NCBP1Q09161 790 aaKnown RBP18.44■□□□□ 0.54
ATP2A3-206ENST00000397043 SPECC1Q5M775 1068 aa18.44■□□□□ 0.54
ATP2A3-206ENST00000397043 ATL3Q6DD88 541 aa18.44■□□□□ 0.54
ATP2A3-206ENST00000397043 AIDAQ96BJ3 306 aa18.44■□□□□ 0.54
ATP2A3-206ENST00000397043 SENP2Q9HC62 589 aa18.44■□□□□ 0.54
ATP2A3-206ENST00000397043 TBC1D2BQ9UPU7 963 aa18.44■□□□□ 0.54
ATP2A3-206ENST00000397043 WDR17Q8IZU2 1322 aa18.44■□□□□ 0.54
ATP2A3-206ENST00000397043 SIPA1L3O60292 1781 aaPredicted RBP18.44■□□□□ 0.54
ATP2A3-206ENST00000397043 SCN11AQ9UI33 1791 aa18.44■□□□□ 0.54
ATP2A3-206ENST00000397043 TRIM29Q14134 588 aa18.44■□□□□ 0.54
ATP2A3-206ENST00000397043 CPLX2Q6PUV4 134 aaKnown RBP18.44■□□□□ 0.54
ATP2A3-206ENST00000397043 MB21D2Q8IYB1 491 aaPredicted RBP18.44■□□□□ 0.54
ATP2A3-206ENST00000397043 UBE2Q2LH0YL09 131 aa18.44■□□□□ 0.54
ATP2A3-206ENST00000397043 PFKFB1P16118 471 aa18.44■□□□□ 0.54
ATP2A3-206ENST00000397043 NKX2-3Q8TAU0 364 aa18.43■□□□□ 0.54
ATP2A3-206ENST00000397043 CLIC6Q96NY7 704 aa18.43■□□□□ 0.54
ATP2A3-206ENST00000397043 PAXBP1Q9Y5B6 917 aa18.43■□□□□ 0.54
ATP2A3-206ENST00000397043 MST1RQ04912 1400 aa18.43■□□□□ 0.54
ATP2A3-206ENST00000397043 ANKRD18BA2A2Z9 1011 aa18.43■□□□□ 0.54
ATP2A3-206ENST00000397043 STARD3NLO95772 234 aa18.43■□□□□ 0.54
ATP2A3-206ENST00000397043 SYKP43405 635 aa18.43■□□□□ 0.54
ATP2A3-206ENST00000397043 SARM1Q6SZW1 724 aa18.43■□□□□ 0.54
ATP2A3-206ENST00000397043 HOMER1Q86YM7 354 aa18.43■□□□□ 0.54
ATP2A3-206ENST00000397043 ZKSCAN3Q9BRR0 538 aa18.43■□□□□ 0.54
ATP2A3-206ENST00000397043 ZNF532Q9HCE3 1301 aa18.42■□□□□ 0.54
ATP2A3-206ENST00000397043 VPS37DQ86XT2 251 aa18.42■□□□□ 0.54
ATP2A3-206ENST00000397043 TBC1D10CQ8IV04 446 aa18.42■□□□□ 0.54
ATP2A3-206ENST00000397043 ISCA1Q9BUE6 129 aa18.42■□□□□ 0.54
ATP2A3-206ENST00000397043 ANGEL1Q9UNK9 670 aaKnown RBP18.42■□□□□ 0.54
ATP2A3-206ENST00000397043 TNS3Q68CZ2 1445 aa18.42■□□□□ 0.54
ATP2A3-206ENST00000397043 SERPINC1P01008 464 aa18.42■□□□□ 0.54
ATP2A3-206ENST00000397043 SFPQP23246 707 aaKnown RBP eCLIP18.42■□□□□ 0.54
ATP2A3-206ENST00000397043 PHKA1P46020 1223 aa18.42■□□□□ 0.54
ATP2A3-206ENST00000397043 KIF23Q02241 960 aaPredicted RBP18.42■□□□□ 0.54
ATP2A3-206ENST00000397043 CYB5R4Q7L1T6 521 aa18.42■□□□□ 0.54
ATP2A3-206ENST00000397043 IRS4O14654 1257 aaPredicted RBP18.42■□□□□ 0.54
ATP2A3-206ENST00000397043 ZBTB38Q8NAP3 1195 aaPredicted RBP18.42■□□□□ 0.54
ATP2A3-206ENST00000397043 SLC26A6Q9BXS9 759 aa18.42■□□□□ 0.54
ATP2A3-206ENST00000397043 PIH1D3Q9NQM4 214 aaKnown RBP18.42■□□□□ 0.54
ATP2A3-206ENST00000397043 ATG3Q9NT62 314 aa18.42■□□□□ 0.54
ATP2A3-206ENST00000397043 WDHD1O75717 1129 aaPredicted RBP18.41■□□□□ 0.54
ATP2A3-206ENST00000397043 CDC25BP30305 580 aa18.41■□□□□ 0.54
ATP2A3-206ENST00000397043 TMEM67Q5HYA8 995 aa18.41■□□□□ 0.54
ATP2A3-206ENST00000397043 CMTR1Q8N1G2 835 aaKnown RBP18.41■□□□□ 0.54
ATP2A3-206ENST00000397043 GOLGA8AA7E2F4 631 aa18.41■□□□□ 0.54
ATP2A3-206ENST00000397043 ATP1A3P13637 1013 aa18.41■□□□□ 0.54
ATP2A3-206ENST00000397043 CTDSPL2Q05D32 466 aa18.41■□□□□ 0.54
ATP2A3-206ENST00000397043 KRT40Q6A162 431 aa18.41■□□□□ 0.54
ATP2A3-206ENST00000397043 BRAPQ7Z569 592 aa18.41■□□□□ 0.54
ATP2A3-206ENST00000397043 PODXL2Q9NZ53 605 aa18.41■□□□□ 0.54
ATP2A3-206ENST00000397043 ZNF215Q9UL58 517 aaPredicted RBP18.41■□□□□ 0.54
ATP2A3-206ENST00000397043 WWC3Q9ULE0 1092 aa18.41■□□□□ 0.54
ATP2A3-206ENST00000397043 NEMFO60524 1076 aa18.4■□□□□ 0.54
ATP2A3-206ENST00000397043 PCCAP05165 728 aaPredicted RBP18.4■□□□□ 0.54
ATP2A3-206ENST00000397043 IARSP41252 1262 aaKnown RBP18.4■□□□□ 0.54
ATP2A3-206ENST00000397043 FAM177A1Q8N128 213 aaPredicted RBP18.4■□□□□ 0.54
ATP2A3-206ENST00000397043 POLR3EQ9NVU0 708 aa18.4■□□□□ 0.54
ATP2A3-206ENST00000397043 ARFGEF2Q9Y6D5 1785 aa18.4■□□□□ 0.54
ATP2A3-206ENST00000397043 IFIT3O14879 490 aaKnown RBP18.4■□□□□ 0.54
ATP2A3-206ENST00000397043 ZBTB43O43298 467 aa18.4■□□□□ 0.54
ATP2A3-206ENST00000397043 NRDCO43847 1150 aa18.4■□□□□ 0.54
ATP2A3-206ENST00000397043 YEATS4O95619 227 aa18.4■□□□□ 0.54
ATP2A3-206ENST00000397043 PNOCQ13519 176 aa18.4■□□□□ 0.54
ATP2A3-206ENST00000397043 CFAP100Q494V2 611 aa18.4■□□□□ 0.54
ATP2A3-206ENST00000397043 PIGBQ92521 554 aa18.4■□□□□ 0.54
ATP2A3-206ENST00000397043 IQSEC3Q9UPP2 1182 aaPredicted RBP18.4■□□□□ 0.54
ATP2A3-206ENST00000397043 A0A1W2PQ27 194 aa18.4■□□□□ 0.54
ATP2A3-206ENST00000397043 A0A1W2PQ64 194 aa18.4■□□□□ 0.54
ATP2A3-206ENST00000397043 A0A1W2PQD8 194 aa18.4■□□□□ 0.54
ATP2A3-206ENST00000397043 CDC27P30260 824 aa18.4■□□□□ 0.54
ATP2A3-206ENST00000397043 BRINP3Q76B58 766 aa18.4■□□□□ 0.54
ATP2A3-206ENST00000397043 NAPBQ9H115 298 aa18.4■□□□□ 0.54
ATP2A3-206ENST00000397043 CTIFO43310 598 aaKnown RBP18.39■□□□□ 0.53
ATP2A3-206ENST00000397043 CCZ1BP86790 482 aa18.39■□□□□ 0.53
ATP2A3-206ENST00000397043 CCZ1P86791 482 aaPredicted RBP18.39■□□□□ 0.53
ATP2A3-206ENST00000397043 GOLGA8FQ08AF8 430 aa18.39■□□□□ 0.53
ATP2A3-206ENST00000397043 GOLGA8DPQ0D2H9 430 aa18.39■□□□□ 0.53
ATP2A3-206ENST00000397043 TTLL11Q8NHH1 800 aa18.39■□□□□ 0.53
ATP2A3-206ENST00000397043 KIF18AQ8NI77 898 aa18.39■□□□□ 0.53
ATP2A3-206ENST00000397043 CCDC102BQ68D86 513 aa18.39■□□□□ 0.53
ATP2A3-206ENST00000397043 NUP133Q8WUM0 1156 aa18.39■□□□□ 0.53
ATP2A3-206ENST00000397043 TRPM3Q9HCF6 1732 aaPredicted RBP18.39■□□□□ 0.53
ATP2A3-206ENST00000397043 MROH7-TTC4A0A0A0MT08 1334 aa18.39■□□□□ 0.53
ATP2A3-206ENST00000397043 ADD2P35612 726 aa18.38■□□□□ 0.53
ATP2A3-206ENST00000397043 SMAP1Q8IYB5 467 aaPredicted RBP18.38■□□□□ 0.53
ATP2A3-206ENST00000397043 CCAR2Q8N163 923 aaKnown RBP18.38■□□□□ 0.53
ATP2A3-206ENST00000397043 MAGEB6Q8N7X4 407 aa18.38■□□□□ 0.53
ATP2A3-206ENST00000397043 PDILTQ8N807 584 aa18.38■□□□□ 0.53
ATP2A3-206ENST00000397043 APOA5Q6Q788 366 aa18.38■□□□□ 0.53
ATP2A3-206ENST00000397043 SLC12A7Q9Y666 1083 aa18.38■□□□□ 0.53
ATP2A3-206ENST00000397043 CDKL5O76039 1030 aa18.38■□□□□ 0.53
ATP2A3-206ENST00000397043 PDE6AP16499 860 aa18.38■□□□□ 0.53
ATP2A3-206ENST00000397043 GSDMDP57764 484 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms