RNA–Protein interactions for RNA: ENST00000395285.3

ARFGAP1-204, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 2

Gene ARFGAP1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-204ENST00000395285 HSP90AB3PQ58FF7 597 aa19.28■□□□□ 0.68
ARFGAP1-204ENST00000395285 RBM43Q6ZSC3 357 aaKnown RBP19.28■□□□□ 0.68
ARFGAP1-204ENST00000395285 C11orf57Q6ZUT1 292 aaPredicted RBP19.28■□□□□ 0.68
ARFGAP1-204ENST00000395285 SMARCC2Q8TAQ2 1214 aa19.28■□□□□ 0.68
ARFGAP1-204ENST00000395285 USP28Q96RU2 1077 aa19.28■□□□□ 0.68
ARFGAP1-204ENST00000395285 ZSCAN16Q9H4T2 348 aaPredicted RBP19.28■□□□□ 0.68
ARFGAP1-204ENST00000395285 COL16A1Q07092 1604 aaPredicted RBP19.28■□□□□ 0.68
ARFGAP1-204ENST00000395285 IFIT1P09914 478 aaKnown RBP19.28■□□□□ 0.68
ARFGAP1-204ENST00000395285 HAND2P61296 217 aa19.28■□□□□ 0.68
ARFGAP1-204ENST00000395285 ZNF592Q92610 1267 aa19.28■□□□□ 0.68
ARFGAP1-204ENST00000395285 SH3TC1Q8TE82 1336 aa19.27■□□□□ 0.68
ARFGAP1-204ENST00000395285 MUM1L1Q5H9M0 696 aa19.27■□□□□ 0.68
ARFGAP1-204ENST00000395285 TMED8Q6PL24 325 aaPredicted RBP19.27■□□□□ 0.68
ARFGAP1-204ENST00000395285 RAB11FIP4Q86YS3 637 aa19.27■□□□□ 0.68
ARFGAP1-204ENST00000395285 DNAJC10Q8IXB1 793 aa19.27■□□□□ 0.68
ARFGAP1-204ENST00000395285 A0A1B0GUL7 405 aa19.27■□□□□ 0.67
ARFGAP1-204ENST00000395285 OTUD7BQ6GQQ9 843 aa19.27■□□□□ 0.67
ARFGAP1-204ENST00000395285 JRKLQ9Y4A0 524 aa19.27■□□□□ 0.67
ARFGAP1-204ENST00000395285 BCL9O00512 1426 aa19.26■□□□□ 0.67
ARFGAP1-204ENST00000395285 MAST3O60307 1309 aa19.26■□□□□ 0.67
ARFGAP1-204ENST00000395285 M0R2C6 588 aa19.26■□□□□ 0.67
ARFGAP1-204ENST00000395285 PLA2G4DQ86XP0 818 aa19.26■□□□□ 0.67
ARFGAP1-204ENST00000395285 TXLNBQ8N3L3 684 aa19.26■□□□□ 0.67
ARFGAP1-204ENST00000395285 CLIP2Q9UDT6 1046 aa19.26■□□□□ 0.67
ARFGAP1-204ENST00000395285 PLCH1Q4KWH8 1693 aa19.26■□□□□ 0.67
ARFGAP1-204ENST00000395285 EXOSC10Q01780 885 aaKnown RBP19.26■□□□□ 0.67
ARFGAP1-204ENST00000395285 CCDC144BQ3MJ40 725 aa19.26■□□□□ 0.67
ARFGAP1-204ENST00000395285 ZMYM1Q5SVZ6 1142 aa19.26■□□□□ 0.67
ARFGAP1-204ENST00000395285 CCDC144CPQ8IYA2 1237 aa19.26■□□□□ 0.67
ARFGAP1-204ENST00000395285 TDRD7Q8NHU6 1098 aaKnown RBP19.26■□□□□ 0.67
ARFGAP1-204ENST00000395285 ME1P48163 572 aa19.25■□□□□ 0.67
ARFGAP1-204ENST00000395285 BMS1Q14692 1282 aaKnown RBP19.25■□□□□ 0.67
ARFGAP1-204ENST00000395285 ZSCAN25Q6NSZ9 544 aa19.25■□□□□ 0.67
ARFGAP1-204ENST00000395285 ISCA1Q9BUE6 129 aa19.25■□□□□ 0.67
ARFGAP1-204ENST00000395285 CDCA7Q9BWT1 371 aaPredicted RBP19.25■□□□□ 0.67
ARFGAP1-204ENST00000395285 HELLSQ9NRZ9 838 aa19.25■□□□□ 0.67
ARFGAP1-204ENST00000395285 LRP6O75581 1613 aa19.25■□□□□ 0.67
ARFGAP1-204ENST00000395285 HMGB1P09429 215 aaKnown RBP19.25■□□□□ 0.67
ARFGAP1-204ENST00000395285 PDIA3P30101 505 aaKnown RBP19.25■□□□□ 0.67
ARFGAP1-204ENST00000395285 TCIRG1Q13488 830 aa19.25■□□□□ 0.67
ARFGAP1-204ENST00000395285 ARID5BQ14865 1188 aa19.25■□□□□ 0.67
ARFGAP1-204ENST00000395285 TEX35Q5T0J7 233 aa19.25■□□□□ 0.67
ARFGAP1-204ENST00000395285 CNKSR2Q8WXI2 1034 aa19.25■□□□□ 0.67
ARFGAP1-204ENST00000395285 ZNF215Q9UL58 517 aaPredicted RBP19.25■□□□□ 0.67
ARFGAP1-204ENST00000395285 TRIM28Q13263 835 aaKnown RBP19.24■□□□□ 0.67
ARFGAP1-204ENST00000395285 KIF6Q6ZMV9 814 aa19.24■□□□□ 0.67
ARFGAP1-204ENST00000395285 DSCC1Q9BVC3 393 aa19.24■□□□□ 0.67
ARFGAP1-204ENST00000395285 GOLGA6L19H0YKK7 550 aa19.24■□□□□ 0.67
ARFGAP1-204ENST00000395285 SART3Q15020 963 aaKnown RBP19.24■□□□□ 0.67
ARFGAP1-204ENST00000395285 ELF2Q15723 593 aa19.24■□□□□ 0.67
ARFGAP1-204ENST00000395285 GOLGA6L1Q8N7Z2 621 aa19.24■□□□□ 0.67
ARFGAP1-204ENST00000395285 CACTINQ8WUQ7 758 aaKnown RBP19.24■□□□□ 0.67
ARFGAP1-204ENST00000395285 OSBP2Q969R2 916 aa19.24■□□□□ 0.67
ARFGAP1-204ENST00000395285 LLPHQ9BRT6 129 aaKnown RBP19.24■□□□□ 0.67
ARFGAP1-204ENST00000395285 EYA2O00167 538 aa19.23■□□□□ 0.67
ARFGAP1-204ENST00000395285 RNF113AO15541 343 aaKnown RBP19.23■□□□□ 0.67
ARFGAP1-204ENST00000395285 ADORA1P30542 326 aa19.23■□□□□ 0.67
ARFGAP1-204ENST00000395285 IL15P40933 162 aaPredicted RBP19.23■□□□□ 0.67
ARFGAP1-204ENST00000395285 WASHC4Q2M389 1173 aa19.23■□□□□ 0.67
ARFGAP1-204ENST00000395285 ILDR1Q86SU0 546 aaPredicted RBP19.23■□□□□ 0.67
ARFGAP1-204ENST00000395285 EGFL6Q8IUX8 553 aa19.23■□□□□ 0.67
ARFGAP1-204ENST00000395285 LAMA4Q16363 1823 aa19.23■□□□□ 0.67
ARFGAP1-204ENST00000395285 RFX7Q2KHR2 1363 aa19.23■□□□□ 0.67
ARFGAP1-204ENST00000395285 PALLDQ8WX93 1383 aa19.23■□□□□ 0.67
ARFGAP1-204ENST00000395285 NPHP1O15259 732 aa19.23■□□□□ 0.67
ARFGAP1-204ENST00000395285 GJB4Q9NTQ9 266 aa19.23■□□□□ 0.67
ARFGAP1-204ENST00000395285 RCOR1Q9UKL0 485 aa19.23■□□□□ 0.67
ARFGAP1-204ENST00000395285 ITGB4P16144 1822 aa19.23■□□□□ 0.67
ARFGAP1-204ENST00000395285 SNW1Q13573 536 aaKnown RBP19.22■□□□□ 0.67
ARFGAP1-204ENST00000395285 GORABQ5T7V8 394 aa19.22■□□□□ 0.67
ARFGAP1-204ENST00000395285 NAA16Q6N069 864 aaPredicted RBP19.22■□□□□ 0.67
ARFGAP1-204ENST00000395285 POLR3GO15318 223 aaPredicted RBP19.22■□□□□ 0.67
ARFGAP1-204ENST00000395285 IQCB1Q15051 598 aa19.22■□□□□ 0.67
ARFGAP1-204ENST00000395285 CCDC73Q6ZRK6 1079 aa19.22■□□□□ 0.67
ARFGAP1-204ENST00000395285 FSIP1Q8NA03 581 aa19.22■□□□□ 0.67
ARFGAP1-204ENST00000395285 THRAP3Q9Y2W1 955 aaKnown RBP19.22■□□□□ 0.67
ARFGAP1-204ENST00000395285 TJP1Q07157 1748 aa19.22■□□□□ 0.67
ARFGAP1-204ENST00000395285 UBAP1LF5GYI3 381 aa19.21■□□□□ 0.67
ARFGAP1-204ENST00000395285 TOM1O60784 492 aa19.21■□□□□ 0.67
ARFGAP1-204ENST00000395285 ADAMTS2O95450 1211 aa19.21■□□□□ 0.67
ARFGAP1-204ENST00000395285 POLR3DP05423 398 aaPredicted RBP19.21■□□□□ 0.67
ARFGAP1-204ENST00000395285 TPD52L1Q16890 204 aaPredicted RBP19.21■□□□□ 0.67
ARFGAP1-204ENST00000395285 PI16Q6UXB8 463 aa19.21■□□□□ 0.67
ARFGAP1-204ENST00000395285 KINO60870 393 aaKnown RBP19.21■□□□□ 0.67
ARFGAP1-204ENST00000395285 FDPSP14324 419 aaKnown RBP19.2■□□□□ 0.66
ARFGAP1-204ENST00000395285 ZSCAN26Q16670 478 aa19.2■□□□□ 0.66
ARFGAP1-204ENST00000395285 SPATA31A1Q5TZJ5 1347 aa19.2■□□□□ 0.66
ARFGAP1-204ENST00000395285 SYTL4Q96C24 671 aaPredicted RBP19.2■□□□□ 0.66
ARFGAP1-204ENST00000395285 A0A1B0GVL5 298 aa19.2■□□□□ 0.66
ARFGAP1-204ENST00000395285 BECN2A8MW95 431 aa19.2■□□□□ 0.66
ARFGAP1-204ENST00000395285 CYP19A1P11511 503 aaPredicted RBP19.2■□□□□ 0.66
ARFGAP1-204ENST00000395285 SCARF1Q14162 830 aa19.2■□□□□ 0.66
ARFGAP1-204ENST00000395285 CARMIL3Q8ND23 1372 aa19.19■□□□□ 0.66
ARFGAP1-204ENST00000395285 MAP3K15Q6ZN16 1313 aa19.19■□□□□ 0.66
ARFGAP1-204ENST00000395285 GRIPAP1Q4V328 841 aa19.19■□□□□ 0.66
ARFGAP1-204ENST00000395285 CEP135Q66GS9 1140 aa19.19■□□□□ 0.66
ARFGAP1-204ENST00000395285 SLC4A9Q96Q91 983 aa19.19■□□□□ 0.66
ARFGAP1-204ENST00000395285 GPR108Q9NPR9 543 aa19.19■□□□□ 0.66
ARFGAP1-204ENST00000395285 CEP126Q9P2H0 1117 aa19.19■□□□□ 0.66
ARFGAP1-204ENST00000395285 STX1AQ16623 288 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms