RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 MIGA1Q8NAN2 632 aa18.55■□□□□ 0.56
PCDH1-203ENST00000394536 CARD6Q9BX69 1037 aa18.55■□□□□ 0.56
PCDH1-203ENST00000394536 MYO5BQ9ULV0 1848 aa18.55■□□□□ 0.56
PCDH1-203ENST00000394536 KIF20BQ96Q89 1820 aa18.55■□□□□ 0.56
PCDH1-203ENST00000394536 APPBP2Q92624 585 aa18.55■□□□□ 0.56
PCDH1-203ENST00000394536 LZTFL1Q9NQ48 299 aa18.55■□□□□ 0.56
PCDH1-203ENST00000394536 M0R2C6 588 aa18.55■□□□□ 0.56
PCDH1-203ENST00000394536 ZMYM1Q5SVZ6 1142 aa18.55■□□□□ 0.56
PCDH1-203ENST00000394536 PLA2G4DQ86XP0 818 aa18.55■□□□□ 0.56
PCDH1-203ENST00000394536 TRMT44Q8IYL2 757 aaKnown RBP18.55■□□□□ 0.56
PCDH1-203ENST00000394536 WASF1Q92558 559 aa18.55■□□□□ 0.56
PCDH1-203ENST00000394536 ZFP91Q96JP5 570 aaPredicted RBP18.55■□□□□ 0.56
PCDH1-203ENST00000394536 ANGEL1Q9UNK9 670 aaKnown RBP18.55■□□□□ 0.56
PCDH1-203ENST00000394536 USP42Q9H9J4 1324 aaKnown RBP18.55■□□□□ 0.56
PCDH1-203ENST00000394536 ATP1A3P13637 1013 aa18.54■□□□□ 0.56
PCDH1-203ENST00000394536 ZNF827Q17R98 1081 aa18.54■□□□□ 0.56
PCDH1-203ENST00000394536 RNF216Q9NWF9 866 aaPredicted RBP18.54■□□□□ 0.56
PCDH1-203ENST00000394536 KCNJ14Q9UNX9 436 aa18.54■□□□□ 0.56
PCDH1-203ENST00000394536 KCNH3Q9ULD8 1083 aa18.54■□□□□ 0.56
PCDH1-203ENST00000394536 NLRP12P59046 1061 aa18.53■□□□□ 0.56
PCDH1-203ENST00000394536 DHX58Q96C10 678 aa18.53■□□□□ 0.56
PCDH1-203ENST00000394536 CARMIL3Q8ND23 1372 aa18.53■□□□□ 0.56
PCDH1-203ENST00000394536 DMTNQ08495 405 aa18.53■□□□□ 0.56
PCDH1-203ENST00000394536 LINC00301Q8NCQ3 95 aa18.53■□□□□ 0.56
PCDH1-203ENST00000394536 CCDC191Q8NCU4 936 aa18.53■□□□□ 0.56
PCDH1-203ENST00000394536 hCG_1642624A0A1W2PR95 340 aa18.53■□□□□ 0.56
PCDH1-203ENST00000394536 POLR2DO15514 142 aaKnown RBP18.52■□□□□ 0.56
PCDH1-203ENST00000394536 C19orf44Q9H6X5 657 aa18.52■□□□□ 0.56
PCDH1-203ENST00000394536 WTAPQ15007 396 aa18.52■□□□□ 0.56
PCDH1-203ENST00000394536 MAGEB6Q8N7X4 407 aa18.52■□□□□ 0.56
PCDH1-203ENST00000394536 CLTCQ00610 1675 aaKnown RBP18.52■□□□□ 0.56
PCDH1-203ENST00000394536 ERBB3P21860 1342 aa18.52■□□□□ 0.55
PCDH1-203ENST00000394536 PUS7LQ9H0K6 701 aaKnown RBP18.52■□□□□ 0.55
PCDH1-203ENST00000394536 YEATS4O95619 227 aa18.51■□□□□ 0.55
PCDH1-203ENST00000394536 CTDSPL2Q05D32 466 aa18.51■□□□□ 0.55
PCDH1-203ENST00000394536 RTN1Q16799 776 aa18.51■□□□□ 0.55
PCDH1-203ENST00000394536 FANCLQ9NW38 375 aa18.51■□□□□ 0.55
PCDH1-203ENST00000394536 ITGA6P23229 1130 aa18.51■□□□□ 0.55
PCDH1-203ENST00000394536 ADKP55263 362 aaKnown RBP18.51■□□□□ 0.55
PCDH1-203ENST00000394536 MCM6Q14566 821 aa18.51■□□□□ 0.55
PCDH1-203ENST00000394536 RTEL1Q9NZ71 1219 aa18.51■□□□□ 0.55
PCDH1-203ENST00000394536 PTPRUQ92729 1446 aa18.51■□□□□ 0.55
PCDH1-203ENST00000394536 TTF1Q15361 905 aaPredicted RBP18.51■□□□□ 0.55
PCDH1-203ENST00000394536 BICDL1Q6ZP65 573 aa18.51■□□□□ 0.55
PCDH1-203ENST00000394536 CCDC102AQ96A19 550 aa18.51■□□□□ 0.55
PCDH1-203ENST00000394536 SLC4A4Q9Y6R1 1079 aa18.51■□□□□ 0.55
PCDH1-203ENST00000394536 KIF5CO60282 957 aa18.5■□□□□ 0.55
PCDH1-203ENST00000394536 EVCP57679 992 aa18.5■□□□□ 0.55
PCDH1-203ENST00000394536 STAMQ92783 540 aa18.5■□□□□ 0.55
PCDH1-203ENST00000394536 PUF60Q9UHX1 559 aaKnown RBP18.5■□□□□ 0.55
PCDH1-203ENST00000394536 NFE2L3Q9Y4A8 694 aa18.5■□□□□ 0.55
PCDH1-203ENST00000394536 CCDC196A0A1B0GTZ2 297 aa18.5■□□□□ 0.55
PCDH1-203ENST00000394536 MARCH6O60337 910 aa18.5■□□□□ 0.55
PCDH1-203ENST00000394536 MBD4O95243 580 aa18.5■□□□□ 0.55
PCDH1-203ENST00000394536 CAGE1Q8TC20 777 aa18.5■□□□□ 0.55
PCDH1-203ENST00000394536 CABP5Q9NP86 173 aa18.5■□□□□ 0.55
PCDH1-203ENST00000394536 IQCB1Q15051 598 aa18.5■□□□□ 0.55
PCDH1-203ENST00000394536 BAG1Q99933 345 aaPredicted RBP18.5■□□□□ 0.55
PCDH1-203ENST00000394536 CYP27B1O15528 508 aa18.49■□□□□ 0.55
PCDH1-203ENST00000394536 DIS3L2Q8IYB7 885 aaKnown RBP18.49■□□□□ 0.55
PCDH1-203ENST00000394536 KRI1Q8N9T8 703 aaKnown RBP18.49■□□□□ 0.55
PCDH1-203ENST00000394536 IRS4O14654 1257 aaPredicted RBP18.49■□□□□ 0.55
PCDH1-203ENST00000394536 KIF20AO95235 890 aa18.49■□□□□ 0.55
PCDH1-203ENST00000394536 DNAJC10Q8IXB1 793 aa18.49■□□□□ 0.55
PCDH1-203ENST00000394536 ARMT1Q9H993 441 aa18.49■□□□□ 0.55
PCDH1-203ENST00000394536 CEP131Q9UPN4 1083 aa18.49■□□□□ 0.55
PCDH1-203ENST00000394536 CEMIPQ8WUJ3 1361 aa18.49■□□□□ 0.55
PCDH1-203ENST00000394536 PDIA6Q15084 440 aa18.49■□□□□ 0.55
PCDH1-203ENST00000394536 NUP88Q99567 741 aaPredicted RBP18.49■□□□□ 0.55
PCDH1-203ENST00000394536 DESI2Q9BSY9 194 aa18.49■□□□□ 0.55
PCDH1-203ENST00000394536 IMPACTQ9P2X3 320 aa18.49■□□□□ 0.55
PCDH1-203ENST00000394536 SLC5A1P13866 664 aa18.48■□□□□ 0.55
PCDH1-203ENST00000394536 ZNF532Q9HCE3 1301 aa18.48■□□□□ 0.55
PCDH1-203ENST00000394536 TCHHQ07283 1943 aa18.48■□□□□ 0.55
PCDH1-203ENST00000394536 BTBD18B2RXH4 712 aa18.48■□□□□ 0.55
PCDH1-203ENST00000394536 NAP1L1P55209 391 aaKnown RBP18.48■□□□□ 0.55
PCDH1-203ENST00000394536 INCENPQ9NQS7 918 aa18.48■□□□□ 0.55
PCDH1-203ENST00000394536 PCDHA5Q9Y5H7 936 aa18.48■□□□□ 0.55
PCDH1-203ENST00000394536 RAD21O60216 631 aa18.48■□□□□ 0.55
PCDH1-203ENST00000394536 IGHMBP2P38935 993 aaKnown RBP18.48■□□□□ 0.55
PCDH1-203ENST00000394536 FBXO38Q6PIJ6 1188 aa18.48■□□□□ 0.55
PCDH1-203ENST00000394536 PPP1R13BQ96KQ4 1090 aa18.48■□□□□ 0.55
PCDH1-203ENST00000394536 ZNF609O15014 1411 aa18.47■□□□□ 0.55
PCDH1-203ENST00000394536 N4BP3O15049 544 aa18.47■□□□□ 0.55
PCDH1-203ENST00000394536 CMA1P23946 247 aa18.47■□□□□ 0.55
PCDH1-203ENST00000394536 ETF1P62495 437 aaKnown RBP18.47■□□□□ 0.55
PCDH1-203ENST00000394536 SYNE4Q8N205 404 aa18.47■□□□□ 0.55
PCDH1-203ENST00000394536 ARFGAP3Q9NP61 516 aa18.47■□□□□ 0.55
PCDH1-203ENST00000394536 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.47■□□□□ 0.55
PCDH1-203ENST00000394536 FAM193AP78312 1265 aa18.47■□□□□ 0.55
PCDH1-203ENST00000394536 JAKMIP3Q5VZ66 844 aa18.47■□□□□ 0.55
PCDH1-203ENST00000394536 TSGA10IPQ3SY00 556 aa18.47■□□□□ 0.55
PCDH1-203ENST00000394536 CTDNEP1O95476 244 aa18.46■□□□□ 0.55
PCDH1-203ENST00000394536 SMARCC2Q8TAQ2 1214 aa18.46■□□□□ 0.55
PCDH1-203ENST00000394536 MED23Q9ULK4 1368 aa18.46■□□□□ 0.55
PCDH1-203ENST00000394536 PRDM1O75626 825 aa18.46■□□□□ 0.55
PCDH1-203ENST00000394536 TXLNAP40222 546 aa18.46■□□□□ 0.55
PCDH1-203ENST00000394536 FMR1NBQ8N0W7 255 aaPredicted RBP18.46■□□□□ 0.55
PCDH1-203ENST00000394536 TECPR2O15040 1411 aa18.46■□□□□ 0.55
PCDH1-203ENST00000394536 LMAN1P49257 510 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms