RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 FAM204AQ9H8W3 233 aa16.5■□□□□ 0.23
CCDC50-201ENST00000392455 TFIP11Q9UBB9 837 aaKnown RBP16.5■□□□□ 0.23
CCDC50-201ENST00000392455 EMILIN1Q9Y6C2 1016 aa16.5■□□□□ 0.23
CCDC50-201ENST00000392455 LDHAL6AQ6ZMR3 332 aa16.5■□□□□ 0.23
CCDC50-201ENST00000392455 ZNF830Q96NB3 372 aaPredicted RBP16.5■□□□□ 0.23
CCDC50-201ENST00000392455 ARHGAP4P98171 946 aa16.49■□□□□ 0.23
CCDC50-201ENST00000392455 C20orf194Q5TEA3 1177 aa16.49■□□□□ 0.23
CCDC50-201ENST00000392455 PARP2Q9UGN5 583 aa16.49■□□□□ 0.23
CCDC50-201ENST00000392455 TOPBP1Q92547 1522 aa16.49■□□□□ 0.23
CCDC50-201ENST00000392455 SNRKQ9NRH2 765 aa16.49■□□□□ 0.23
CCDC50-201ENST00000392455 NBPF6Q5VWK0 638 aa16.49■□□□□ 0.23
CCDC50-201ENST00000392455 PPP1R42Q7Z4L9 355 aa16.49■□□□□ 0.23
CCDC50-201ENST00000392455 NBPF4Q96M43 638 aa16.49■□□□□ 0.23
CCDC50-201ENST00000392455 LRPPRCP42704 1394 aaKnown RBP16.49■□□□□ 0.23
CCDC50-201ENST00000392455 FLIIQ13045 1269 aa16.49■□□□□ 0.23
CCDC50-201ENST00000392455 BIRC2Q13490 618 aa16.49■□□□□ 0.23
CCDC50-201ENST00000392455 PDE1CQ14123 709 aaPredicted RBP16.49■□□□□ 0.23
CCDC50-201ENST00000392455 TRIML1Q8N9V2 468 aa16.49■□□□□ 0.23
CCDC50-201ENST00000392455 TTC16Q8NEE8 873 aa16.49■□□□□ 0.23
CCDC50-201ENST00000392455 PPP4R1Q8TF05 950 aa16.49■□□□□ 0.23
CCDC50-201ENST00000392455 DACT3Q96B18 629 aaPredicted RBP16.49■□□□□ 0.23
CCDC50-201ENST00000392455 GDPD2Q9HCC8 539 aa16.49■□□□□ 0.23
CCDC50-201ENST00000392455 FRMD4BQ9Y2L6 1034 aa16.49■□□□□ 0.23
CCDC50-201ENST00000392455 MRVI1Q9Y6F6 885 aa16.49■□□□□ 0.23
CCDC50-201ENST00000392455 CLNS1AP54105 237 aaKnown RBP16.49■□□□□ 0.23
CCDC50-201ENST00000392455 NCAPD3P42695 1498 aa16.48■□□□□ 0.23
CCDC50-201ENST00000392455 AGTPBP1Q9UPW5 1226 aa16.48■□□□□ 0.23
CCDC50-201ENST00000392455 ORC6Q9Y5N6 252 aa16.48■□□□□ 0.23
CCDC50-201ENST00000392455 ZEB2O60315 1214 aa16.48■□□□□ 0.23
CCDC50-201ENST00000392455 KMT5BQ4FZB7 885 aa16.48■□□□□ 0.23
CCDC50-201ENST00000392455 MTMR3Q13615 1198 aa16.48■□□□□ 0.23
CCDC50-201ENST00000392455 IQCDQ96DY2 449 aa16.48■□□□□ 0.23
CCDC50-201ENST00000392455 IFT20Q8IY31 132 aa16.48■□□□□ 0.23
CCDC50-201ENST00000392455 NOX5Q96PH1 765 aa16.48■□□□□ 0.23
CCDC50-201ENST00000392455 PHF8Q9UPP1 1060 aa16.48■□□□□ 0.23
CCDC50-201ENST00000392455 CDAN1Q8IWY9 1227 aa16.48■□□□□ 0.23
CCDC50-201ENST00000392455 NCOA7Q8NI08 942 aa16.48■□□□□ 0.23
CCDC50-201ENST00000392455 TNPO1Q92973 898 aaKnown RBP16.48■□□□□ 0.23
CCDC50-201ENST00000392455 RPGRIP1Q96KN7 1286 aa16.48■□□□□ 0.23
CCDC50-201ENST00000392455 POTEB3A0JP26 581 aa16.47■□□□□ 0.23
CCDC50-201ENST00000392455 POTEBQ6S5H4 581 aa16.47■□□□□ 0.23
CCDC50-201ENST00000392455 ARHGEF2Q92974 986 aaKnown RBP16.47■□□□□ 0.23
CCDC50-201ENST00000392455 P3H4Q92791 437 aa16.47■□□□□ 0.23
CCDC50-201ENST00000392455 ATL3Q6DD88 541 aa16.47■□□□□ 0.23
CCDC50-201ENST00000392455 TPCN1Q9ULQ1 816 aa16.47■□□□□ 0.23
CCDC50-201ENST00000392455 CUL7Q14999 1698 aa16.47■□□□□ 0.23
CCDC50-201ENST00000392455 TSHZ3Q63HK5 1081 aa16.47■□□□□ 0.23
CCDC50-201ENST00000392455 UBE3BQ7Z3V4 1068 aa16.47■□□□□ 0.23
CCDC50-201ENST00000392455 NRBF2Q96F24 287 aa16.47■□□□□ 0.23
CCDC50-201ENST00000392455 PRDM10Q9NQV6 1147 aa16.47■□□□□ 0.23
CCDC50-201ENST00000392455 AMOTL2Q9Y2J4 779 aa16.47■□□□□ 0.23
CCDC50-201ENST00000392455 ANGPTL3Q9Y5C1 460 aa16.47■□□□□ 0.23
CCDC50-201ENST00000392455 MAIP1Q8WWC4 291 aa16.47■□□□□ 0.23
CCDC50-201ENST00000392455 JARID2Q92833 1246 aaPredicted RBP16.47■□□□□ 0.23
CCDC50-201ENST00000392455 AFAP1L1Q8TED9 768 aa16.47■□□□□ 0.23
CCDC50-201ENST00000392455 CRNKL1Q9BZJ0 848 aaKnown RBP16.47■□□□□ 0.23
CCDC50-201ENST00000392455 TSPY3P0CV98 308 aa16.46■□□□□ 0.23
CCDC50-201ENST00000392455 TSPY8P0CW00 308 aa16.46■□□□□ 0.23
CCDC50-201ENST00000392455 DBN1Q16643 649 aa16.46■□□□□ 0.23
CCDC50-201ENST00000392455 LIN9Q5TKA1 542 aa16.46■□□□□ 0.23
CCDC50-201ENST00000392455 KCNG1Q9UIX4 513 aa16.46■□□□□ 0.23
CCDC50-201ENST00000392455 TSKSQ9UJT2 592 aa16.46■□□□□ 0.23
CCDC50-201ENST00000392455 NEK1Q96PY6 1258 aa16.46■□□□□ 0.23
CCDC50-201ENST00000392455 PPP1R12CQ9BZL4 782 aa16.46■□□□□ 0.23
CCDC50-201ENST00000392455 SYF2O95926 243 aaKnown RBP16.46■□□□□ 0.23
CCDC50-201ENST00000392455 SKAP1Q86WV1 359 aa16.46■□□□□ 0.23
CCDC50-201ENST00000392455 NONOQ15233 471 aaKnown RBP eCLIP16.46■□□□□ 0.23
CCDC50-201ENST00000392455 EPS15L1Q9UBC2 864 aa16.46■□□□□ 0.23
CCDC50-201ENST00000392455 DNMBPQ6XZF7 1577 aa16.46■□□□□ 0.22
CCDC50-201ENST00000392455 HELBQ8NG08 1087 aaPredicted RBP16.45■□□□□ 0.22
CCDC50-201ENST00000392455 ECHDC1Q9NTX5 307 aa16.45■□□□□ 0.22
CCDC50-201ENST00000392455 TBC1D9Q6ZT07 1266 aa16.45■□□□□ 0.22
CCDC50-201ENST00000392455 INPP5BP32019 993 aa16.45■□□□□ 0.22
CCDC50-201ENST00000392455 COG7P83436 770 aa16.45■□□□□ 0.22
CCDC50-201ENST00000392455 TEX13AQ9BXU3 409 aaPredicted RBP16.45■□□□□ 0.22
CCDC50-201ENST00000392455 ORC3Q9UBD5 711 aaPredicted RBP16.45■□□□□ 0.22
CCDC50-201ENST00000392455 WASLO00401 505 aaPredicted RBP16.45■□□□□ 0.22
CCDC50-201ENST00000392455 TRIM27P14373 513 aa16.45■□□□□ 0.22
CCDC50-201ENST00000392455 KRT28Q7Z3Y7 464 aa16.45■□□□□ 0.22
CCDC50-201ENST00000392455 WDR44Q5JSH3 913 aa16.45■□□□□ 0.22
CCDC50-201ENST00000392455 SLC8A1P32418 973 aa16.45■□□□□ 0.22
CCDC50-201ENST00000392455 EVI5O60447 810 aa16.44■□□□□ 0.22
CCDC50-201ENST00000392455 IFIT1BQ5T764 474 aaKnown RBP16.44■□□□□ 0.22
CCDC50-201ENST00000392455 UBLCP1Q8WVY7 318 aaPredicted RBP16.44■□□□□ 0.22
CCDC50-201ENST00000392455 PAWRQ96IZ0 340 aaKnown RBP16.44■□□□□ 0.22
CCDC50-201ENST00000392455 VPS18Q9P253 973 aa16.44■□□□□ 0.22
CCDC50-201ENST00000392455 MAGI1Q96QZ7 1491 aaPredicted RBP16.44■□□□□ 0.22
CCDC50-201ENST00000392455 OGFRQ9NZT2 677 aa16.44■□□□□ 0.22
CCDC50-201ENST00000392455 TTC21BQ7Z4L5 1316 aa16.44■□□□□ 0.22
CCDC50-201ENST00000392455 PIK3R4Q99570 1358 aa16.44■□□□□ 0.22
CCDC50-201ENST00000392455 CD109Q6YHK3 1445 aa16.44■□□□□ 0.22
CCDC50-201ENST00000392455 PYGLP06737 847 aa16.44■□□□□ 0.22
CCDC50-201ENST00000392455 RAP1GDS1P52306 607 aa16.44■□□□□ 0.22
CCDC50-201ENST00000392455 CCDC152Q4G0S7 254 aa16.44■□□□□ 0.22
CCDC50-201ENST00000392455 ADGRL1O94910 1474 aa16.44■□□□□ 0.22
CCDC50-201ENST00000392455 SPDYE3A6NKU9 549 aa16.44■□□□□ 0.22
CCDC50-201ENST00000392455 HOXA7P31268 230 aaPredicted RBP16.44■□□□□ 0.22
CCDC50-201ENST00000392455 RPS6KA2Q15349 733 aa16.44■□□□□ 0.22
CCDC50-201ENST00000392455 ZNF277Q9NRM2 450 aaPredicted RBP16.44■□□□□ 0.22
CCDC50-201ENST00000392455 STX8Q9UNK0 236 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms