RNA–Protein interactions for RNA: ENST00000391941.6

ERCC2-201, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC2, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-201ENST00000391941 NBPF26B4DH59 902 aa20.86■□□□□ 0.93
ERCC2-201ENST00000391941 RNF113AO15541 343 aaKnown RBP20.86■□□□□ 0.93
ERCC2-201ENST00000391941 PHKG2P15735 406 aa20.86■□□□□ 0.93
ERCC2-201ENST00000391941 GSDMDP57764 484 aa20.86■□□□□ 0.93
ERCC2-201ENST00000391941 NBPF14Q5TI25 921 aa20.86■□□□□ 0.93
ERCC2-201ENST00000391941 NBPF10Q6P3W6 841 aaKnown RBP20.86■□□□□ 0.93
ERCC2-201ENST00000391941 SYNE3Q6ZMZ3 975 aa20.86■□□□□ 0.93
ERCC2-201ENST00000391941 NBPF15Q8N660 670 aa20.86■□□□□ 0.93
ERCC2-201ENST00000391941 FBXO18Q8NFZ0 1043 aa20.86■□□□□ 0.93
ERCC2-201ENST00000391941 KIF13AQ9H1H9 1805 aa20.85■□□□□ 0.93
ERCC2-201ENST00000391941 PDILTQ8N807 584 aa20.85■□□□□ 0.93
ERCC2-201ENST00000391941 HELLSQ9NRZ9 838 aa20.85■□□□□ 0.93
ERCC2-201ENST00000391941 FANCLQ9NW38 375 aa20.85■□□□□ 0.93
ERCC2-201ENST00000391941 C5P01031 1676 aa20.85■□□□□ 0.93
ERCC2-201ENST00000391941 PLA2G4AP47712 749 aa20.85■□□□□ 0.93
ERCC2-201ENST00000391941 UBASH3AP57075 661 aa20.85■□□□□ 0.93
ERCC2-201ENST00000391941 SYNE4Q8N205 404 aa20.85■□□□□ 0.93
ERCC2-201ENST00000391941 CCDC82Q8N4S0 544 aa20.85■□□□□ 0.93
ERCC2-201ENST00000391941 H2AFXP16104 143 aaPredicted RBP20.84■□□□□ 0.93
ERCC2-201ENST00000391941 PDE4BQ07343 736 aa20.84■□□□□ 0.93
ERCC2-201ENST00000391941 ANO1Q5XXA6 986 aa20.84■□□□□ 0.93
ERCC2-201ENST00000391941 TRMT44Q8IYL2 757 aaKnown RBP20.84■□□□□ 0.93
ERCC2-201ENST00000391941 NEK11Q8NG66 645 aa20.84■□□□□ 0.93
ERCC2-201ENST00000391941 ZFP91Q96JP5 570 aaPredicted RBP20.84■□□□□ 0.93
ERCC2-201ENST00000391941 DESI2Q9BSY9 194 aa20.84■□□□□ 0.93
ERCC2-201ENST00000391941 CYP27B1O15528 508 aa20.84■□□□□ 0.93
ERCC2-201ENST00000391941 SNRPA1P09661 255 aaKnown RBP20.84■□□□□ 0.93
ERCC2-201ENST00000391941 PNMA6AP0CW24 399 aaPredicted RBP20.84■□□□□ 0.93
ERCC2-201ENST00000391941 NLRP12P59046 1061 aa20.84■□□□□ 0.93
ERCC2-201ENST00000391941 CCDC93Q567U6 631 aa20.84■□□□□ 0.93
ERCC2-201ENST00000391941 FOXP4Q8IVH2 680 aaPredicted RBP20.84■□□□□ 0.93
ERCC2-201ENST00000391941 GRAMD1CQ8IYS0 662 aa20.84■□□□□ 0.93
ERCC2-201ENST00000391941 ZNF274Q96GC6 653 aaPredicted RBP20.84■□□□□ 0.93
ERCC2-201ENST00000391941 IRX2Q9BZI1 471 aaPredicted RBP20.84■□□□□ 0.93
ERCC2-201ENST00000391941 A0A0U1RQJ8 604 aa20.83■□□□□ 0.93
ERCC2-201ENST00000391941 ATRIPQ8WXE1 791 aa20.83■□□□□ 0.93
ERCC2-201ENST00000391941 L2HGDHQ9H9P8 463 aa20.83■□□□□ 0.93
ERCC2-201ENST00000391941 SIPA1L3O60292 1781 aaPredicted RBP20.83■□□□□ 0.93
ERCC2-201ENST00000391941 ADKP55263 362 aaKnown RBP20.83■□□□□ 0.93
ERCC2-201ENST00000391941 SHC4Q6S5L8 630 aa20.83■□□□□ 0.93
ERCC2-201ENST00000391941 MICU3Q86XE3 530 aa20.83■□□□□ 0.93
ERCC2-201ENST00000391941 WDR24Q96S15 920 aa20.83■□□□□ 0.93
ERCC2-201ENST00000391941 NOL10Q9BSC4 688 aaKnown RBP20.83■□□□□ 0.93
ERCC2-201ENST00000391941 ATP2B1P20020 1258 aa20.83■□□□□ 0.92
ERCC2-201ENST00000391941 ZAP70P43403 619 aa20.83■□□□□ 0.92
ERCC2-201ENST00000391941 KIF23Q02241 960 aaPredicted RBP20.83■□□□□ 0.92
ERCC2-201ENST00000391941 GRIN1Q05586 938 aa20.83■□□□□ 0.92
ERCC2-201ENST00000391941 TFRCP02786 760 aaKnown RBP20.82■□□□□ 0.92
ERCC2-201ENST00000391941 SYKP43405 635 aa20.82■□□□□ 0.92
ERCC2-201ENST00000391941 GNL2Q13823 731 aaKnown RBP20.82■□□□□ 0.92
ERCC2-201ENST00000391941 TRIM65Q6PJ69 517 aa20.82■□□□□ 0.92
ERCC2-201ENST00000391941 LONRF3Q496Y0 759 aa20.82■□□□□ 0.92
ERCC2-201ENST00000391941 CMTR1Q8N1G2 835 aaKnown RBP20.82■□□□□ 0.92
ERCC2-201ENST00000391941 BBXQ8WY36 941 aaPredicted RBP20.82■□□□□ 0.92
ERCC2-201ENST00000391941 KCND1Q9NSA2 647 aa20.82■□□□□ 0.92
ERCC2-201ENST00000391941 FAM53CQ9NYF3 392 aa20.82■□□□□ 0.92
ERCC2-201ENST00000391941 ETF1P62495 437 aaKnown RBP20.81■□□□□ 0.92
ERCC2-201ENST00000391941 ST5P78524 1137 aa20.81■□□□□ 0.92
ERCC2-201ENST00000391941 UBXN4Q92575 508 aa20.81■□□□□ 0.92
ERCC2-201ENST00000391941 INTS13Q9NVM9 706 aa20.81■□□□□ 0.92
ERCC2-201ENST00000391941 PHRF1Q9P1Y6 1649 aaKnown RBP20.81■□□□□ 0.92
ERCC2-201ENST00000391941 A0A1W2PQ27 194 aa20.81■□□□□ 0.92
ERCC2-201ENST00000391941 A0A1W2PQ64 194 aa20.81■□□□□ 0.92
ERCC2-201ENST00000391941 A0A1W2PQD8 194 aa20.81■□□□□ 0.92
ERCC2-201ENST00000391941 BMP6P22004 513 aa20.81■□□□□ 0.92
ERCC2-201ENST00000391941 KARSQ15046 597 aaKnown RBP20.81■□□□□ 0.92
ERCC2-201ENST00000391941 MNS1Q8NEH6 495 aa20.81■□□□□ 0.92
ERCC2-201ENST00000391941 KCNG4Q8TDN1 519 aa20.81■□□□□ 0.92
ERCC2-201ENST00000391941 IMPACTQ9P2X3 320 aa20.81■□□□□ 0.92
ERCC2-201ENST00000391941 MYH15Q9Y2K3 1946 aa20.81■□□□□ 0.92
ERCC2-201ENST00000391941 COBLO75128 1261 aa20.8■□□□□ 0.92
ERCC2-201ENST00000391941 SASH3O75995 380 aa20.8■□□□□ 0.92
ERCC2-201ENST00000391941 CCDC150Q8NCX0 1101 aa20.8■□□□□ 0.92
ERCC2-201ENST00000391941 APPP05067 770 aa20.8■□□□□ 0.92
ERCC2-201ENST00000391941 TOGARAM2Q6ZUX3 1019 aa20.8■□□□□ 0.92
ERCC2-201ENST00000391941 VPS37DQ86XT2 251 aa20.8■□□□□ 0.92
ERCC2-201ENST00000391941 MTF1Q14872 753 aa20.79■□□□□ 0.92
ERCC2-201ENST00000391941 CYB5R4Q7L1T6 521 aa20.79■□□□□ 0.92
ERCC2-201ENST00000391941 KRT28Q7Z3Y7 464 aa20.79■□□□□ 0.92
ERCC2-201ENST00000391941 ALG1Q9BT22 464 aa20.79■□□□□ 0.92
ERCC2-201ENST00000391941 POLR3EQ9NVU0 708 aa20.79■□□□□ 0.92
ERCC2-201ENST00000391941 TEX35Q5T0J7 233 aa20.79■□□□□ 0.92
ERCC2-201ENST00000391941 REXO1L1PQ8IX06 675 aa20.79■□□□□ 0.92
ERCC2-201ENST00000391941 CABP4P57796 275 aa20.79■□□□□ 0.92
ERCC2-201ENST00000391941 IMMTQ16891 758 aaKnown RBP20.79■□□□□ 0.92
ERCC2-201ENST00000391941 TTC39AQ5SRH9 613 aa20.79■□□□□ 0.92
ERCC2-201ENST00000391941 RALYLQ86SE5 291 aaKnown RBP20.79■□□□□ 0.92
ERCC2-201ENST00000391941 METTL16Q86W50 562 aaKnown RBP20.79■□□□□ 0.92
ERCC2-201ENST00000391941 NBPF3Q9H094 633 aa20.79■□□□□ 0.92
ERCC2-201ENST00000391941 TMEM51Q9NW97 253 aa20.79■□□□□ 0.92
ERCC2-201ENST00000391941 KIF2AO00139 706 aaPredicted RBP20.78■□□□□ 0.92
ERCC2-201ENST00000391941 EYA2O00167 538 aa20.78■□□□□ 0.92
ERCC2-201ENST00000391941 IRX5P78411 483 aaPredicted RBP20.78■□□□□ 0.92
ERCC2-201ENST00000391941 MB21D2Q8IYB1 491 aaPredicted RBP20.78■□□□□ 0.92
ERCC2-201ENST00000391941 XAGE2Q96GT9 111 aa20.78■□□□□ 0.92
ERCC2-201ENST00000391941 ABCC6O95255 1503 aa20.78■□□□□ 0.92
ERCC2-201ENST00000391941 TATP17735 454 aaPredicted RBP20.78■□□□□ 0.92
ERCC2-201ENST00000391941 EVCP57679 992 aa20.78■□□□□ 0.92
ERCC2-201ENST00000391941 TBC1D10CQ8IV04 446 aa20.78■□□□□ 0.92
ERCC2-201ENST00000391941 PCDHA5Q9Y5H7 936 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms