RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 RNF168Q8IYW5 571 aaPredicted RBP18.15■□□□□ 0.5
SHANK1-204ENST00000391814 PLCB3Q01970 1234 aa18.15■□□□□ 0.5
SHANK1-204ENST00000391814 DDX27Q96GQ7 796 aaKnown RBP18.15■□□□□ 0.5
SHANK1-204ENST00000391814 TRIM31Q9BZY9 425 aa18.15■□□□□ 0.5
SHANK1-204ENST00000391814 TTC21AQ8NDW8 1320 aa18.15■□□□□ 0.5
SHANK1-204ENST00000391814 CCDC170Q8IYT3 715 aa18.15■□□□□ 0.5
SHANK1-204ENST00000391814 TMEM87AQ8NBN3 555 aa18.15■□□□□ 0.5
SHANK1-204ENST00000391814 RRP15Q9Y3B9 282 aaKnown RBP18.15■□□□□ 0.5
SHANK1-204ENST00000391814 CDK13Q14004 1512 aaKnown RBP18.15■□□□□ 0.5
SHANK1-204ENST00000391814 RXRAP19793 462 aa18.15■□□□□ 0.5
SHANK1-204ENST00000391814 SNCBQ16143 134 aa18.15■□□□□ 0.5
SHANK1-204ENST00000391814 WHAMMP3Q1A5X7 153 aa18.15■□□□□ 0.5
SHANK1-204ENST00000391814 ASXL1Q8IXJ9 1541 aa18.15■□□□□ 0.5
SHANK1-204ENST00000391814 CHMLP26374 656 aa18.14■□□□□ 0.5
SHANK1-204ENST00000391814 SECISBP2LQ93073 1101 aaKnown RBP18.14■□□□□ 0.5
SHANK1-204ENST00000391814 RABGAP1Q9Y3P9 1069 aa18.14■□□□□ 0.5
SHANK1-204ENST00000391814 RFC1P35251 1148 aaPredicted RBP18.14■□□□□ 0.49
SHANK1-204ENST00000391814 NLRP12P59046 1061 aa18.14■□□□□ 0.49
SHANK1-204ENST00000391814 DBF4Q9UBU7 674 aaPredicted RBP18.14■□□□□ 0.49
SHANK1-204ENST00000391814 KDM2BQ8NHM5 1336 aa18.14■□□□□ 0.49
SHANK1-204ENST00000391814 PI4KAP2A4QPH2 592 aa18.14■□□□□ 0.49
SHANK1-204ENST00000391814 KLHL7Q8IXQ5 586 aa18.14■□□□□ 0.49
SHANK1-204ENST00000391814 PI4KAP1Q8N8J0 262 aa18.14■□□□□ 0.49
SHANK1-204ENST00000391814 KIAA1524Q8TCG1 905 aa18.14■□□□□ 0.49
SHANK1-204ENST00000391814 PSMB7Q99436 277 aa18.14■□□□□ 0.49
SHANK1-204ENST00000391814 ATP5J2-PTCD1G3V325 749 aa18.14■□□□□ 0.49
SHANK1-204ENST00000391814 PTCD1O75127 700 aaKnown RBP18.14■□□□□ 0.49
SHANK1-204ENST00000391814 VSIG1Q86XK7 387 aa18.14■□□□□ 0.49
SHANK1-204ENST00000391814 MGARPQ8TDB4 240 aa18.14■□□□□ 0.49
SHANK1-204ENST00000391814 SUDS3Q9H7L9 328 aaPredicted RBP18.14■□□□□ 0.49
SHANK1-204ENST00000391814 RAPGEF1Q13905 1077 aa18.14■□□□□ 0.49
SHANK1-204ENST00000391814 BRAPQ7Z569 592 aa18.14■□□□□ 0.49
SHANK1-204ENST00000391814 SBNO2Q9Y2G9 1366 aa18.14■□□□□ 0.49
SHANK1-204ENST00000391814 PABPN1LA6NDY0 278 aaKnown RBP18.13■□□□□ 0.49
SHANK1-204ENST00000391814 RPSAP08865 295 aaKnown RBP18.13■□□□□ 0.49
SHANK1-204ENST00000391814 SAMM50Q9Y512 469 aa18.13■□□□□ 0.49
SHANK1-204ENST00000391814 TRIM75PA6NK02 468 aa18.13■□□□□ 0.49
SHANK1-204ENST00000391814 ATP8B2P98198 1209 aa18.13■□□□□ 0.49
SHANK1-204ENST00000391814 PPFIA1Q13136 1202 aa18.13■□□□□ 0.49
SHANK1-204ENST00000391814 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.13■□□□□ 0.49
SHANK1-204ENST00000391814 AQRO60306 1485 aaKnown RBP eCLIP18.13■□□□□ 0.49
SHANK1-204ENST00000391814 NOC4LQ9BVI4 516 aaKnown RBP18.13■□□□□ 0.49
SHANK1-204ENST00000391814 SEC31AO94979 1220 aaKnown RBP18.13■□□□□ 0.49
SHANK1-204ENST00000391814 CEP85Q6P2H3 762 aa18.13■□□□□ 0.49
SHANK1-204ENST00000391814 TRIM4Q9C037 500 aa18.13■□□□□ 0.49
SHANK1-204ENST00000391814 ATP6V0A2Q9Y487 856 aa18.13■□□□□ 0.49
SHANK1-204ENST00000391814 SYNRGQ9UMZ2 1314 aa18.13■□□□□ 0.49
SHANK1-204ENST00000391814 ATP2A2P16615 1042 aaKnown RBP18.13■□□□□ 0.49
SHANK1-204ENST00000391814 MRPS9P82933 396 aaKnown RBP18.13■□□□□ 0.49
SHANK1-204ENST00000391814 PDE4BQ07343 736 aa18.13■□□□□ 0.49
SHANK1-204ENST00000391814 TRIM14Q14142 442 aa18.13■□□□□ 0.49
SHANK1-204ENST00000391814 MAPKBP1O60336 1514 aa18.13■□□□□ 0.49
SHANK1-204ENST00000391814 CCDC110Q8TBZ0 833 aa18.12■□□□□ 0.49
SHANK1-204ENST00000391814 CAPS2Q9BXY5 557 aa18.12■□□□□ 0.49
SHANK1-204ENST00000391814 RALGAPBQ86X10 1494 aa18.12■□□□□ 0.49
SHANK1-204ENST00000391814 TAOK1Q7L7X3 1001 aa18.12■□□□□ 0.49
SHANK1-204ENST00000391814 ZNF354CQ86Y25 554 aa18.12■□□□□ 0.49
SHANK1-204ENST00000391814 ANKIB1Q9P2G1 1089 aa18.12■□□□□ 0.49
SHANK1-204ENST00000391814 MTUS1Q9ULD2 1270 aa18.12■□□□□ 0.49
SHANK1-204ENST00000391814 FAM184BQ9ULE4 1060 aa18.12■□□□□ 0.49
SHANK1-204ENST00000391814 GPIHBP1Q8IV16 184 aa18.12■□□□□ 0.49
SHANK1-204ENST00000391814 GOLGA8KD6RF30 607 aa18.12■□□□□ 0.49
SHANK1-204ENST00000391814 STARD3NLO95772 234 aa18.12■□□□□ 0.49
SHANK1-204ENST00000391814 NBPF7P0C2Y1 421 aaPredicted RBP18.12■□□□□ 0.49
SHANK1-204ENST00000391814 BRD3Q15059 726 aa18.12■□□□□ 0.49
SHANK1-204ENST00000391814 ATP1A2P50993 1020 aa18.12■□□□□ 0.49
SHANK1-204ENST00000391814 CCDC62Q6P9F0 684 aa18.12■□□□□ 0.49
SHANK1-204ENST00000391814 SYNJ2O15056 1496 aa18.11■□□□□ 0.49
SHANK1-204ENST00000391814 DTNBO60941 627 aa18.11■□□□□ 0.49
SHANK1-204ENST00000391814 LRRC45Q96CN5 670 aa18.11■□□□□ 0.49
SHANK1-204ENST00000391814 RAB3IPQ96QF0 476 aaPredicted RBP18.11■□□□□ 0.49
SHANK1-204ENST00000391814 SLC4A4Q9Y6R1 1079 aa18.11■□□□□ 0.49
SHANK1-204ENST00000391814 WAPLQ7Z5K2 1190 aa18.11■□□□□ 0.49
SHANK1-204ENST00000391814 ANKRD36BQ8N2N9 1353 aa18.11■□□□□ 0.49
SHANK1-204ENST00000391814 RUFY4Q6ZNE9 571 aa18.11■□□□□ 0.49
SHANK1-204ENST00000391814 USH1CQ9Y6N9 552 aa18.11■□□□□ 0.49
SHANK1-204ENST00000391814 GUCY2FP51841 1108 aa18.11■□□□□ 0.49
SHANK1-204ENST00000391814 GRM1Q13255 1194 aa18.11■□□□□ 0.49
SHANK1-204ENST00000391814 ZNF365Q70YC5 407 aa18.1■□□□□ 0.49
SHANK1-204ENST00000391814 TRMT112Q9UI30 125 aaKnown RBP18.1■□□□□ 0.49
SHANK1-204ENST00000391814 LRMPQ12912 555 aa18.1■□□□□ 0.49
SHANK1-204ENST00000391814 FAM173BQ6P4H8 233 aa18.1■□□□□ 0.49
SHANK1-204ENST00000391814 ZNF215Q9UL58 517 aaPredicted RBP18.1■□□□□ 0.49
SHANK1-204ENST00000391814 DIXDC1Q155Q3 683 aa18.1■□□□□ 0.49
SHANK1-204ENST00000391814 PDE11AQ9HCR9 933 aa18.1■□□□□ 0.49
SHANK1-204ENST00000391814 PA2G4Q9UQ80 394 aaKnown RBP18.1■□□□□ 0.49
SHANK1-204ENST00000391814 DCAF17Q5H9S7 520 aaPredicted RBP18.1■□□□□ 0.49
SHANK1-204ENST00000391814 PLCB1Q9NQ66 1216 aa18.1■□□□□ 0.49
SHANK1-204ENST00000391814 PAK2Q13177 524 aa18.1■□□□□ 0.49
SHANK1-204ENST00000391814 PHLDB2Q86SQ0 1253 aa18.1■□□□□ 0.49
SHANK1-204ENST00000391814 C8orf58Q8NAV2 365 aa18.1■□□□□ 0.49
SHANK1-204ENST00000391814 TCHPQ9BT92 498 aa18.09■□□□□ 0.49
SHANK1-204ENST00000391814 RPRD2Q5VT52 1461 aaKnown RBP18.09■□□□□ 0.49
SHANK1-204ENST00000391814 ANXA1P04083 346 aa18.09■□□□□ 0.49
SHANK1-204ENST00000391814 NOX5Q96PH1 765 aa18.09■□□□□ 0.49
SHANK1-204ENST00000391814 ZNF219Q9P2Y4 722 aaPredicted RBP18.09■□□□□ 0.49
SHANK1-204ENST00000391814 PYCARDQ9ULZ3 195 aa18.09■□□□□ 0.49
SHANK1-204ENST00000391814 SCAF11Q99590 1463 aaKnown RBP18.09■□□□□ 0.49
SHANK1-204ENST00000391814 RPS6KB1P23443 525 aa18.09■□□□□ 0.49
SHANK1-204ENST00000391814 ADKP55263 362 aaKnown RBP18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms