RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 HAND2P61296 217 aa22.3■■□□□ 1.16
SHANK1-203ENST00000391813 CCDC6Q16204 474 aa22.3■■□□□ 1.16
SHANK1-203ENST00000391813 ARHGAP25P42331 645 aa22.3■■□□□ 1.16
SHANK1-203ENST00000391813 NMIQ13287 307 aaPredicted RBP22.3■■□□□ 1.16
SHANK1-203ENST00000391813 NAPGQ99747 312 aaPredicted RBP22.3■■□□□ 1.16
SHANK1-203ENST00000391813 CHPF2Q9P2E5 772 aa22.3■■□□□ 1.16
SHANK1-203ENST00000391813 KDM6BO15054 1643 aa22.3■■□□□ 1.16
SHANK1-203ENST00000391813 PRPF4BQ13523 1007 aaKnown RBP22.3■■□□□ 1.16
SHANK1-203ENST00000391813 DHX32Q7L7V1 743 aaKnown RBP22.3■■□□□ 1.16
SHANK1-203ENST00000391813 CCDC50Q8IVM0 306 aa22.3■■□□□ 1.16
SHANK1-203ENST00000391813 GPR161Q8N6U8 529 aaKnown RBP22.3■■□□□ 1.16
SHANK1-203ENST00000391813 TSC1Q92574 1164 aa22.3■■□□□ 1.16
SHANK1-203ENST00000391813 GADD45BO75293 160 aaPredicted RBP22.3■■□□□ 1.16
SHANK1-203ENST00000391813 SSR1P43307 286 aaKnown RBP22.3■■□□□ 1.16
SHANK1-203ENST00000391813 AFMP43652 599 aa22.29■■□□□ 1.16
SHANK1-203ENST00000391813 LUC7L2Q9Y383 392 aaKnown RBP22.29■■□□□ 1.16
SHANK1-203ENST00000391813 PPFIA3O75145 1194 aa22.29■■□□□ 1.16
SHANK1-203ENST00000391813 KIF5BP33176 963 aa22.29■■□□□ 1.16
SHANK1-203ENST00000391813 DZIP3Q86Y13 1208 aaKnown RBP22.29■■□□□ 1.16
SHANK1-203ENST00000391813 ANTXR1Q9H6X2 564 aa22.29■■□□□ 1.16
SHANK1-203ENST00000391813 KIF4AO95239 1232 aa22.29■■□□□ 1.16
SHANK1-203ENST00000391813 IDEP14735 1019 aa22.29■■□□□ 1.16
SHANK1-203ENST00000391813 PLVAPQ9BX97 442 aa22.29■■□□□ 1.16
SHANK1-203ENST00000391813 RANBP6O60518 1105 aaKnown RBP22.29■■□□□ 1.16
SHANK1-203ENST00000391813 CETN1Q12798 172 aa22.29■■□□□ 1.16
SHANK1-203ENST00000391813 DESP17661 470 aa22.28■■□□□ 1.16
SHANK1-203ENST00000391813 BRD3Q15059 726 aa22.28■■□□□ 1.16
SHANK1-203ENST00000391813 CRACR2BQ8N4Y2 399 aaPredicted RBP22.28■■□□□ 1.16
SHANK1-203ENST00000391813 LLPHQ9BRT6 129 aaKnown RBP22.28■■□□□ 1.16
SHANK1-203ENST00000391813 EXOC1Q9NV70 894 aa22.28■■□□□ 1.16
SHANK1-203ENST00000391813 STK32BQ9NY57 414 aa22.28■■□□□ 1.16
SHANK1-203ENST00000391813 NIP7Q9Y221 180 aaKnown RBP eCLIP22.28■■□□□ 1.16
SHANK1-203ENST00000391813 VGLL3A8MV65 326 aa22.28■■□□□ 1.16
SHANK1-203ENST00000391813 UQCRFS1P1P0C7P4 283 aa22.28■■□□□ 1.16
SHANK1-203ENST00000391813 SCLT1Q96NL6 688 aa22.28■■□□□ 1.16
SHANK1-203ENST00000391813 LINS1Q8NG48 757 aa22.28■■□□□ 1.16
SHANK1-203ENST00000391813 MFSD6Q6ZSS7 791 aa22.27■■□□□ 1.16
SHANK1-203ENST00000391813 CCDC172P0C7W6 258 aa22.27■■□□□ 1.16
SHANK1-203ENST00000391813 TSPYL6Q8N831 410 aa22.27■■□□□ 1.16
SHANK1-203ENST00000391813 LEO1Q8WVC0 666 aaPredicted RBP22.27■■□□□ 1.16
SHANK1-203ENST00000391813 FANCCQ00597 558 aa22.27■■□□□ 1.16
SHANK1-203ENST00000391813 TRIM14Q14142 442 aa22.27■■□□□ 1.16
SHANK1-203ENST00000391813 RASAL2Q9UJF2 1139 aa22.27■■□□□ 1.16
SHANK1-203ENST00000391813 PARP3Q9Y6F1 533 aa22.27■■□□□ 1.16
SHANK1-203ENST00000391813 PRPHP41219 470 aa22.27■■□□□ 1.16
SHANK1-203ENST00000391813 DRC1Q96MC2 740 aa22.27■■□□□ 1.16
SHANK1-203ENST00000391813 TRIM75PA6NK02 468 aa22.26■■□□□ 1.15
SHANK1-203ENST00000391813 GOLGA6CA6NDK9 693 aa22.26■■□□□ 1.15
SHANK1-203ENST00000391813 GOLGA6DP0CG33 693 aa22.26■■□□□ 1.15
SHANK1-203ENST00000391813 NAA25Q14CX7 972 aa22.26■■□□□ 1.15
SHANK1-203ENST00000391813 SPAG5Q96R06 1193 aa22.26■■□□□ 1.15
SHANK1-203ENST00000391813 GOLGA6AQ9NYA3 693 aa22.26■■□□□ 1.15
SHANK1-203ENST00000391813 LMBR1Q8WVP7 490 aa22.26■■□□□ 1.15
SHANK1-203ENST00000391813 ZNF215Q9UL58 517 aaPredicted RBP22.26■■□□□ 1.15
SHANK1-203ENST00000391813 ARHGAP31Q2M1Z3 1444 aa22.26■■□□□ 1.15
SHANK1-203ENST00000391813 SPATA24Q86W54 205 aa22.26■■□□□ 1.15
SHANK1-203ENST00000391813 CAPZA3Q96KX2 299 aa22.26■■□□□ 1.15
SHANK1-203ENST00000391813 CCDC77Q9BR77 488 aa22.26■■□□□ 1.15
SHANK1-203ENST00000391813 TNNC1P63316 161 aa22.25■■□□□ 1.15
SHANK1-203ENST00000391813 TSGA10Q9BZW7 698 aa22.25■■□□□ 1.15
SHANK1-203ENST00000391813 HOXB7P09629 217 aa22.25■■□□□ 1.15
SHANK1-203ENST00000391813 CCDC144CPQ8IYA2 1237 aa22.25■■□□□ 1.15
SHANK1-203ENST00000391813 CNNM2Q9H8M5 875 aa22.25■■□□□ 1.15
SHANK1-203ENST00000391813 ANXA1P04083 346 aa22.25■■□□□ 1.15
SHANK1-203ENST00000391813 KRT23Q9C075 422 aa22.25■■□□□ 1.15
SHANK1-203ENST00000391813 SAMD15Q9P1V8 674 aa22.25■■□□□ 1.15
SHANK1-203ENST00000391813 GCC2Q8IWJ2 1684 aa22.25■■□□□ 1.15
SHANK1-203ENST00000391813 BAG3O95817 575 aa22.25■■□□□ 1.15
SHANK1-203ENST00000391813 ZNF76P36508 570 aa22.25■■□□□ 1.15
SHANK1-203ENST00000391813 CTNNBL1Q8WYA6 563 aaPredicted RBP22.25■■□□□ 1.15
SHANK1-203ENST00000391813 A0A1B0GVL5 298 aa22.24■■□□□ 1.15
SHANK1-203ENST00000391813 CCDC122Q5T0U0 273 aa22.24■■□□□ 1.15
SHANK1-203ENST00000391813 MKNK2Q9HBH9 465 aa22.24■■□□□ 1.15
SHANK1-203ENST00000391813 GRM8O00222 908 aa22.24■■□□□ 1.15
SHANK1-203ENST00000391813 STAMBPO95630 424 aa22.24■■□□□ 1.15
SHANK1-203ENST00000391813 STAT6P42226 847 aa22.24■■□□□ 1.15
SHANK1-203ENST00000391813 SNX14Q9Y5W7 946 aa22.24■■□□□ 1.15
SHANK1-203ENST00000391813 MAP2K2P36507 400 aa22.23■■□□□ 1.15
SHANK1-203ENST00000391813 TRAPPC3LQ5T215 181 aa22.23■■□□□ 1.15
SHANK1-203ENST00000391813 ZNF219Q9P2Y4 722 aaPredicted RBP22.23■■□□□ 1.15
SHANK1-203ENST00000391813 CFAP65Q6ZU64 1925 aaKnown RBP22.23■■□□□ 1.15
SHANK1-203ENST00000391813 SGSM2O43147 1006 aa22.23■■□□□ 1.15
SHANK1-203ENST00000391813 ATP8B1O43520 1251 aa22.23■■□□□ 1.15
SHANK1-203ENST00000391813 PPFIA1Q13136 1202 aa22.23■■□□□ 1.15
SHANK1-203ENST00000391813 WTAPQ15007 396 aa22.23■■□□□ 1.15
SHANK1-203ENST00000391813 RAB11FIP4Q86YS3 637 aa22.23■■□□□ 1.15
SHANK1-203ENST00000391813 CPSF2Q9P2I0 782 aaKnown RBP22.23■■□□□ 1.15
SHANK1-203ENST00000391813 PLXNC1O60486 1568 aa22.23■■□□□ 1.15
SHANK1-203ENST00000391813 CCNL1Q9UK58 526 aaPredicted RBP22.23■■□□□ 1.15
SHANK1-203ENST00000391813 KRI1Q8N9T8 703 aaKnown RBP22.23■■□□□ 1.15
SHANK1-203ENST00000391813 PRC1O43663 620 aa22.22■■□□□ 1.15
SHANK1-203ENST00000391813 RPS6KB1P23443 525 aa22.22■■□□□ 1.15
SHANK1-203ENST00000391813 MRFAP1L1Q96HT8 127 aa22.22■■□□□ 1.15
SHANK1-203ENST00000391813 IL13P35225 146 aa22.22■■□□□ 1.15
SHANK1-203ENST00000391813 LACTBP83111 547 aaPredicted RBP22.22■■□□□ 1.15
SHANK1-203ENST00000391813 UBXN1Q04323 297 aa22.22■■□□□ 1.15
SHANK1-203ENST00000391813 RTN1Q16799 776 aa22.22■■□□□ 1.15
SHANK1-203ENST00000391813 TMEM132AQ24JP5 1023 aa22.22■■□□□ 1.15
SHANK1-203ENST00000391813 TCERG1LQ5VWI1 586 aa22.22■■□□□ 1.15
SHANK1-203ENST00000391813 EFCAB8A8MWE9 144 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms