RNA–Protein interactions for RNA: ENST00000389993.7

PSME4-201, Transcript of proteasome activator subunit 4, humanhuman

TSL 1 (best)

Gene PSME4, Length 6,581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME4-201ENST00000389993 FCHSD1Q86WN1 690 aa16.66■□□□□ 0.26
PSME4-201ENST00000389993 GPR101Q96P66 508 aaPredicted RBP16.66■□□□□ 0.26
PSME4-201ENST00000389993 USH1GQ495M9 461 aa16.66■□□□□ 0.26
PSME4-201ENST00000389993 USPL1Q5W0Q7 1092 aa16.66■□□□□ 0.26
PSME4-201ENST00000389993 MAEAQ7L5Y9 396 aa16.66■□□□□ 0.26
PSME4-201ENST00000389993 SEC31BQ9NQW1 1179 aa16.66■□□□□ 0.26
PSME4-201ENST00000389993 HELLSQ9NRZ9 838 aa16.66■□□□□ 0.26
PSME4-201ENST00000389993 FAM135BQ49AJ0 1406 aa16.66■□□□□ 0.26
PSME4-201ENST00000389993 TYRO3Q06418 890 aa16.66■□□□□ 0.26
PSME4-201ENST00000389993 PRPF4BQ13523 1007 aaKnown RBP16.66■□□□□ 0.26
PSME4-201ENST00000389993 CTNNBL1Q8WYA6 563 aaPredicted RBP16.66■□□□□ 0.26
PSME4-201ENST00000389993 MLH3Q9UHC1 1453 aa16.66■□□□□ 0.26
PSME4-201ENST00000389993 GGA1Q9UJY5 639 aa16.66■□□□□ 0.26
PSME4-201ENST00000389993 HDAC9Q9UKV0 1011 aa16.66■□□□□ 0.26
PSME4-201ENST00000389993 TCIRG1Q13488 830 aa16.65■□□□□ 0.26
PSME4-201ENST00000389993 TTC16Q8NEE8 873 aa16.65■□□□□ 0.26
PSME4-201ENST00000389993 RRP36Q96EU6 259 aaKnown RBP16.65■□□□□ 0.26
PSME4-201ENST00000389993 ZBTB1Q9Y2K1 713 aa16.65■□□□□ 0.26
PSME4-201ENST00000389993 RAD51AP2Q09MP3 1159 aa16.65■□□□□ 0.26
PSME4-201ENST00000389993 PPP1R12BO60237 982 aaPredicted RBP16.65■□□□□ 0.26
PSME4-201ENST00000389993 AXIN2Q9Y2T1 843 aa16.65■□□□□ 0.26
PSME4-201ENST00000389993 UBXN4Q92575 508 aa16.65■□□□□ 0.26
PSME4-201ENST00000389993 FAM212AQ96EL1 285 aa16.65■□□□□ 0.26
PSME4-201ENST00000389993 GOPCQ9HD26 462 aa16.65■□□□□ 0.26
PSME4-201ENST00000389993 ANKRD2Q9GZV1 360 aa16.65■□□□□ 0.26
PSME4-201ENST00000389993 DENND2AQ9ULE3 1009 aa16.65■□□□□ 0.26
PSME4-201ENST00000389993 DDX39AO00148 427 aaKnown RBP16.64■□□□□ 0.25
PSME4-201ENST00000389993 C17orf53Q8N3J3 647 aaPredicted RBP16.64■□□□□ 0.25
PSME4-201ENST00000389993 TAF4BQ92750 862 aa16.64■□□□□ 0.25
PSME4-201ENST00000389993 KIF5CO60282 957 aa16.64■□□□□ 0.25
PSME4-201ENST00000389993 NOP2P46087 812 aaKnown RBP16.64■□□□□ 0.25
PSME4-201ENST00000389993 HOMER2Q9NSB8 354 aa16.64■□□□□ 0.25
PSME4-201ENST00000389993 POLR3GO15318 223 aaPredicted RBP16.64■□□□□ 0.25
PSME4-201ENST00000389993 GTF2IP78347 998 aa16.64■□□□□ 0.25
PSME4-201ENST00000389993 ME3Q16798 604 aa16.64■□□□□ 0.25
PSME4-201ENST00000389993 JAKMIP3Q5VZ66 844 aa16.64■□□□□ 0.25
PSME4-201ENST00000389993 LUC7LQ9NQ29 371 aaKnown RBP16.64■□□□□ 0.25
PSME4-201ENST00000389993 TRIM75PA6NK02 468 aa16.64■□□□□ 0.25
PSME4-201ENST00000389993 TMCO5BA8MYB1 307 aa16.64■□□□□ 0.25
PSME4-201ENST00000389993 CRKLP46109 303 aaKnown RBP16.64■□□□□ 0.25
PSME4-201ENST00000389993 DPP8Q6V1X1 898 aaPredicted RBP16.64■□□□□ 0.25
PSME4-201ENST00000389993 RGS22Q8NE09 1264 aa16.64■□□□□ 0.25
PSME4-201ENST00000389993 KCNG4Q8TDN1 519 aa16.64■□□□□ 0.25
PSME4-201ENST00000389993 ZFP91Q96JP5 570 aaPredicted RBP16.64■□□□□ 0.25
PSME4-201ENST00000389993 DPH6Q7L8W6 267 aa16.63■□□□□ 0.25
PSME4-201ENST00000389993 SYNE4Q8N205 404 aa16.63■□□□□ 0.25
PSME4-201ENST00000389993 KBTBD3Q8NAB2 608 aa16.63■□□□□ 0.25
PSME4-201ENST00000389993 CCDC113Q9H0I3 377 aa16.63■□□□□ 0.25
PSME4-201ENST00000389993 NPHP4O75161 1426 aaPredicted RBP16.63■□□□□ 0.25
PSME4-201ENST00000389993 USP6P35125 1406 aa16.63■□□□□ 0.25
PSME4-201ENST00000389993 SYNMO15061 1565 aa16.63■□□□□ 0.25
PSME4-201ENST00000389993 ARHGEF25Q86VW2 580 aa16.63■□□□□ 0.25
PSME4-201ENST00000389993 ANTXR1Q9H6X2 564 aa16.63■□□□□ 0.25
PSME4-201ENST00000389993 SHROOM2Q13796 1616 aa16.63■□□□□ 0.25
PSME4-201ENST00000389993 PLEKHG1Q9ULL1 1385 aa16.63■□□□□ 0.25
PSME4-201ENST00000389993 CEP152O94986 1710 aa16.63■□□□□ 0.25
PSME4-201ENST00000389993 E7EWF7 191 aa16.63■□□□□ 0.25
PSME4-201ENST00000389993 APPBP2Q92624 585 aa16.63■□□□□ 0.25
PSME4-201ENST00000389993 CCT6AP40227 531 aaKnown RBP16.62■□□□□ 0.25
PSME4-201ENST00000389993 JDP2Q8WYK2 163 aa16.62■□□□□ 0.25
PSME4-201ENST00000389993 BCCIPQ9P287 314 aaKnown RBP eCLIP16.62■□□□□ 0.25
PSME4-201ENST00000389993 SETQ01105 290 aaPredicted RBP16.62■□□□□ 0.25
PSME4-201ENST00000389993 PDCL2Q8N4E4 241 aa16.62■□□□□ 0.25
PSME4-201ENST00000389993 LPIN2Q92539 896 aa16.62■□□□□ 0.25
PSME4-201ENST00000389993 RBSNQ9H1K0 784 aa16.62■□□□□ 0.25
PSME4-201ENST00000389993 INSRP06213 1382 aa16.62■□□□□ 0.25
PSME4-201ENST00000389993 MYOM2P54296 1465 aa16.62■□□□□ 0.25
PSME4-201ENST00000389993 SNAP23O00161 211 aa16.62■□□□□ 0.25
PSME4-201ENST00000389993 CCNT1O60563 726 aaKnown RBP16.62■□□□□ 0.25
PSME4-201ENST00000389993 CD2BP2O95400 341 aaKnown RBP16.62■□□□□ 0.25
PSME4-201ENST00000389993 PPP4R3AQ6IN85 833 aa16.62■□□□□ 0.25
PSME4-201ENST00000389993 TMTC2Q8N394 836 aa16.62■□□□□ 0.25
PSME4-201ENST00000389993 PARP1P09874 1014 aaKnown RBP16.62■□□□□ 0.25
PSME4-201ENST00000389993 GNAT2P19087 354 aa16.62■□□□□ 0.25
PSME4-201ENST00000389993 TRIM21P19474 475 aaKnown RBP16.62■□□□□ 0.25
PSME4-201ENST00000389993 KARSQ15046 597 aaKnown RBP16.62■□□□□ 0.25
PSME4-201ENST00000389993 CCDC148Q8NFR7 591 aa16.62■□□□□ 0.25
PSME4-201ENST00000389993 VPS54Q9P1Q0 977 aa16.62■□□□□ 0.25
PSME4-201ENST00000389993 KDRP35968 1356 aa16.62■□□□□ 0.25
PSME4-201ENST00000389993 YEATS4O95619 227 aa16.61■□□□□ 0.25
PSME4-201ENST00000389993 MAPK8IP2Q13387 824 aaPredicted RBP16.61■□□□□ 0.25
PSME4-201ENST00000389993 FRMPD2Q68DX3 1309 aaPredicted RBP16.61■□□□□ 0.25
PSME4-201ENST00000389993 PHKA1P46020 1223 aa16.61■□□□□ 0.25
PSME4-201ENST00000389993 IFNKQ9P0W0 207 aa16.61■□□□□ 0.25
PSME4-201ENST00000389993 ABCC3O15438 1527 aa16.61■□□□□ 0.25
PSME4-201ENST00000389993 GOLGA8HP0CJ92 632 aa16.61■□□□□ 0.25
PSME4-201ENST00000389993 TBC1D7Q9P0N9 293 aa16.61■□□□□ 0.25
PSME4-201ENST00000389993 TBCAO75347 108 aaKnown RBP16.61■□□□□ 0.25
PSME4-201ENST00000389993 KIF18AQ8NI77 898 aa16.61■□□□□ 0.25
PSME4-201ENST00000389993 SNW1Q13573 536 aaKnown RBP16.61■□□□□ 0.25
PSME4-201ENST00000389993 ADCK5Q3MIX3 580 aa16.61■□□□□ 0.25
PSME4-201ENST00000389993 AMPD3Q01432 767 aa16.61■□□□□ 0.25
PSME4-201ENST00000389993 SRP68Q9UHB9 627 aaKnown RBP16.61■□□□□ 0.25
PSME4-201ENST00000389993 GNG11P61952 73 aa16.6■□□□□ 0.25
PSME4-201ENST00000389993 ERVV-2B6SEH9 535 aa16.6■□□□□ 0.25
PSME4-201ENST00000389993 PDIA4P13667 645 aaKnown RBP16.6■□□□□ 0.25
PSME4-201ENST00000389993 CCDC174Q6PII3 467 aa16.6■□□□□ 0.25
PSME4-201ENST00000389993 TSPYL1Q9H0U9 437 aa16.6■□□□□ 0.25
PSME4-201ENST00000389993 JADE2Q9NQC1 790 aa16.6■□□□□ 0.25
PSME4-201ENST00000389993 LOC102724428A0A0B4J2F2 783 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms