RNA–Protein interactions for RNA: ENST00000378823.7

RAD50-201, Transcript of RAD50 double strand break repair protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAD50, Length 8,306 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-201ENST00000378823 VIMP08670 466 aaKnown RBP12.6□□□□□ -0.39
RAD50-201ENST00000378823 RAB3GAP1Q15042 981 aa12.6□□□□□ -0.39
RAD50-201ENST00000378823 DCAF17Q5H9S7 520 aaPredicted RBP12.6□□□□□ -0.39
RAD50-201ENST00000378823 INTS4Q96HW7 963 aaKnown RBP12.6□□□□□ -0.39
RAD50-201ENST00000378823 SETDB2Q96T68 719 aa12.6□□□□□ -0.39
RAD50-201ENST00000378823 HDAC9Q9UKV0 1011 aa12.6□□□□□ -0.39
RAD50-201ENST00000378823 MAGEB6P1A0A0J9YX57 407 aa12.6□□□□□ -0.39
RAD50-201ENST00000378823 PLS1Q14651 629 aa12.6□□□□□ -0.39
RAD50-201ENST00000378823 SYT10Q6XYQ8 523 aa12.6□□□□□ -0.39
RAD50-201ENST00000378823 RASSF4Q9H2L5 321 aa12.6□□□□□ -0.39
RAD50-201ENST00000378823 ADGRL1O94910 1474 aa12.6□□□□□ -0.39
RAD50-201ENST00000378823 ELP1O95163 1332 aa12.6□□□□□ -0.39
RAD50-201ENST00000378823 PPP2R3AQ06190 1150 aa12.6□□□□□ -0.39
RAD50-201ENST00000378823 CACNA2D3Q8IZS8 1091 aa12.6□□□□□ -0.39
RAD50-201ENST00000378823 C11orf95C9JLR9 678 aaPredicted RBP12.6□□□□□ -0.39
RAD50-201ENST00000378823 ACTN4O43707 911 aaKnown RBP12.6□□□□□ -0.39
RAD50-201ENST00000378823 RUFY3Q7L099 469 aa12.6□□□□□ -0.39
RAD50-201ENST00000378823 PPFIBP2Q8ND30 876 aa12.6□□□□□ -0.39
RAD50-201ENST00000378823 VCX3BQ9H321 246 aa12.59□□□□□ -0.39
RAD50-201ENST00000378823 A0A1B0GUA9 196 aa12.59□□□□□ -0.39
RAD50-201ENST00000378823 GBP1P32455 592 aa12.59□□□□□ -0.39
RAD50-201ENST00000378823 CCDC65Q8IXS2 484 aa12.59□□□□□ -0.39
RAD50-201ENST00000378823 ZNF622Q969S3 477 aaKnown RBP eCLIP12.59□□□□□ -0.396e-7■■■□□ 15.2
RAD50-201ENST00000378823 PHF8Q9UPP1 1060 aa12.59□□□□□ -0.39
RAD50-201ENST00000378823 CCT6AP40227 531 aaKnown RBP12.59□□□□□ -0.39
RAD50-201ENST00000378823 IL15P40933 162 aaPredicted RBP12.59□□□□□ -0.39
RAD50-201ENST00000378823 KRBA2Q6ZNG9 492 aa12.59□□□□□ -0.39
RAD50-201ENST00000378823 AFAP1L1Q8TED9 768 aa12.59□□□□□ -0.39
RAD50-201ENST00000378823 KIF1BO60333 1816 aa12.59□□□□□ -0.39
RAD50-201ENST00000378823 FYB2Q5VWT5 728 aa12.59□□□□□ -0.39
RAD50-201ENST00000378823 RPUSD2Q8IZ73 545 aaKnown RBP12.59□□□□□ -0.39
RAD50-201ENST00000378823 EPB41P11171 864 aaKnown RBP12.59□□□□□ -0.39
RAD50-201ENST00000378823 HPDP32754 393 aaPredicted RBP12.59□□□□□ -0.39
RAD50-201ENST00000378823 MIPOL1Q8TD10 442 aa12.59□□□□□ -0.39
RAD50-201ENST00000378823 PLCG2P16885 1265 aa12.58□□□□□ -0.39
RAD50-201ENST00000378823 ZNF804AQ7Z570 1209 aa12.58□□□□□ -0.39
RAD50-201ENST00000378823 ANKRD44Q8N8A2 993 aa12.58□□□□□ -0.39
RAD50-201ENST00000378823 CCT6BQ92526 530 aa12.58□□□□□ -0.39
RAD50-201ENST00000378823 RBM28Q9NW13 759 aaKnown RBP12.58□□□□□ -0.39
RAD50-201ENST00000378823 KDM5AP29375 1690 aaKnown RBP12.58□□□□□ -0.4
RAD50-201ENST00000378823 GTF3C6Q969F1 213 aa12.58□□□□□ -0.4
RAD50-201ENST00000378823 NGLY1Q96IV0 654 aa12.58□□□□□ -0.4
RAD50-201ENST00000378823 CEP85LQ5SZL2 805 aa12.58□□□□□ -0.4
RAD50-201ENST00000378823 E7EVH7 732 aa12.58□□□□□ -0.4
RAD50-201ENST00000378823 PPP1R2P41236 205 aa12.58□□□□□ -0.4
RAD50-201ENST00000378823 TUBB2AQ13885 445 aa12.58□□□□□ -0.4
RAD50-201ENST00000378823 TRIM14Q14142 442 aa12.58□□□□□ -0.4
RAD50-201ENST00000378823 TUBB2BQ9BVA1 445 aa12.58□□□□□ -0.4
RAD50-201ENST00000378823 STX17P56962 302 aa12.58□□□□□ -0.4
RAD50-201ENST00000378823 CRCPO75575 148 aa12.58□□□□□ -0.4
RAD50-201ENST00000378823 CLUL1Q15846 466 aa12.58□□□□□ -0.4
RAD50-201ENST00000378823 AK2P54819 239 aa12.58□□□□□ -0.4
RAD50-201ENST00000378823 EVCP57679 992 aa12.58□□□□□ -0.4
RAD50-201ENST00000378823 UAP1Q16222 522 aaPredicted RBP12.58□□□□□ -0.4
RAD50-201ENST00000378823 CHST3Q7LGC8 479 aa12.58□□□□□ -0.4
RAD50-201ENST00000378823 UBL4BQ8N7F7 174 aa12.58□□□□□ -0.4
RAD50-201ENST00000378823 AMOTL2Q9Y2J4 779 aa12.58□□□□□ -0.4
RAD50-201ENST00000378823 MAGEB6Q8N7X4 407 aa12.57□□□□□ -0.4
RAD50-201ENST00000378823 ARID4AP29374 1257 aaPredicted RBP12.57□□□□□ -0.4
RAD50-201ENST00000378823 PCK1P35558 622 aa12.57□□□□□ -0.4
RAD50-201ENST00000378823 RAPGEF1Q13905 1077 aa12.57□□□□□ -0.4
RAD50-201ENST00000378823 VWA3BQ502W6 1294 aa12.57□□□□□ -0.4
RAD50-201ENST00000378823 CREB3L3Q68CJ9 461 aa12.57□□□□□ -0.4
RAD50-201ENST00000378823 NEDD9Q14511 834 aa12.57□□□□□ -0.4
RAD50-201ENST00000378823 TAOK1Q7L7X3 1001 aa12.57□□□□□ -0.4
RAD50-201ENST00000378823 JARID2Q92833 1246 aaPredicted RBP12.57□□□□□ -0.4
RAD50-201ENST00000378823 PCDHB15Q9Y5E8 787 aa12.57□□□□□ -0.4
RAD50-201ENST00000378823 KRT5P13647 590 aa12.57□□□□□ -0.4
RAD50-201ENST00000378823 DHX32Q7L7V1 743 aaKnown RBP12.57□□□□□ -0.4
RAD50-201ENST00000378823 IFT20Q8IY31 132 aa12.57□□□□□ -0.4
RAD50-201ENST00000378823 KIFC2Q96AC6 838 aa12.57□□□□□ -0.4
RAD50-201ENST00000378823 ZBTB9Q96C00 473 aa12.57□□□□□ -0.4
RAD50-201ENST00000378823 HSPA1LP34931 641 aa12.57□□□□□ -0.4
RAD50-201ENST00000378823 ERCC5P28715 1186 aaPredicted RBP12.57□□□□□ -0.4
RAD50-201ENST00000378823 MYL5Q02045 173 aa12.57□□□□□ -0.4
RAD50-201ENST00000378823 PICALMQ13492 652 aa12.57□□□□□ -0.4
RAD50-201ENST00000378823 VTI1AQ96AJ9 217 aa12.57□□□□□ -0.4
RAD50-201ENST00000378823 SDCCAG8Q86SQ7 713 aaPredicted RBP12.56□□□□□ -0.4
RAD50-201ENST00000378823 A0A1B0GUL7 405 aa12.56□□□□□ -0.4
RAD50-201ENST00000378823 STX10O60499 249 aa12.56□□□□□ -0.4
RAD50-201ENST00000378823 CYP26C1Q6V0L0 522 aa12.56□□□□□ -0.4
RAD50-201ENST00000378823 SEPT14Q6ZU15 432 aa12.56□□□□□ -0.4
RAD50-201ENST00000378823 LEO1Q8WVC0 666 aaPredicted RBP12.56□□□□□ -0.4
RAD50-201ENST00000378823 NLRP3Q96P20 1036 aa12.56□□□□□ -0.4
RAD50-201ENST00000378823 GABPB2Q8TAK5 448 aaPredicted RBP12.56□□□□□ -0.4
RAD50-201ENST00000378823 GOLGA6CA6NDK9 693 aa12.56□□□□□ -0.4
RAD50-201ENST00000378823 GOLGA6DP0CG33 693 aa12.56□□□□□ -0.4
RAD50-201ENST00000378823 CNNM4Q6P4Q7 775 aa12.56□□□□□ -0.4
RAD50-201ENST00000378823 GOLGA6AQ9NYA3 693 aa12.56□□□□□ -0.4
RAD50-201ENST00000378823 NDUFAB1O14561 156 aa12.56□□□□□ -0.4
RAD50-201ENST00000378823 WDR44Q5JSH3 913 aa12.56□□□□□ -0.4
RAD50-201ENST00000378823 CCDC62Q6P9F0 684 aa12.56□□□□□ -0.4
RAD50-201ENST00000378823 NUF2Q9BZD4 464 aa12.56□□□□□ -0.4
RAD50-201ENST00000378823 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.56□□□□□ -0.4
RAD50-201ENST00000378823 VWA3AA6NCI4 1184 aa12.56□□□□□ -0.4
RAD50-201ENST00000378823 SARNPP82979 210 aaKnown RBP12.56□□□□□ -0.4
RAD50-201ENST00000378823 NMIQ13287 307 aaPredicted RBP12.56□□□□□ -0.4
RAD50-201ENST00000378823 PPANQ9NQ55 473 aaKnown RBP12.56□□□□□ -0.4
RAD50-201ENST00000378823 BUB1BO60566 1050 aaPredicted RBP12.56□□□□□ -0.4
RAD50-201ENST00000378823 C8orf74Q6P047 294 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms