RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 ATP5J2-PTCD1G3V325 749 aa19.06■□□□□ 0.64
TRIM39-201ENST00000376656 PTCD1O75127 700 aaKnown RBP19.06■□□□□ 0.64
TRIM39-201ENST00000376656 TIMM10P62072 90 aa19.06■□□□□ 0.64
TRIM39-201ENST00000376656 PLPPR3Q6T4P5 718 aa19.06■□□□□ 0.64
TRIM39-201ENST00000376656 ANKRD13DQ6ZTN6 518 aa19.06■□□□□ 0.64
TRIM39-201ENST00000376656 TMEM139Q8IV31 216 aa19.06■□□□□ 0.64
TRIM39-201ENST00000376656 PPP2R2CQ9Y2T4 447 aa19.06■□□□□ 0.64
TRIM39-201ENST00000376656 MYL5Q02045 173 aa19.06■□□□□ 0.64
TRIM39-201ENST00000376656 BRAPQ7Z569 592 aa19.06■□□□□ 0.64
TRIM39-201ENST00000376656 WDR24Q96S15 920 aa19.06■□□□□ 0.64
TRIM39-201ENST00000376656 M0R2C6 588 aa19.05■□□□□ 0.64
TRIM39-201ENST00000376656 CBFA2T2O43439 604 aa19.05■□□□□ 0.64
TRIM39-201ENST00000376656 TOP1P11387 765 aaKnown RBP19.05■□□□□ 0.64
TRIM39-201ENST00000376656 HAND2P61296 217 aa19.05■□□□□ 0.64
TRIM39-201ENST00000376656 ZNF790Q6PG37 636 aa19.05■□□□□ 0.64
TRIM39-201ENST00000376656 TUBE1Q9UJT0 475 aa19.05■□□□□ 0.64
TRIM39-201ENST00000376656 TPM1P09493 284 aa19.05■□□□□ 0.64
TRIM39-201ENST00000376656 PNOCQ13519 176 aa19.05■□□□□ 0.64
TRIM39-201ENST00000376656 HPS5Q9UPZ3 1129 aa19.05■□□□□ 0.64
TRIM39-201ENST00000376656 KLF18A0A0U1RQI7 1052 aa19.05■□□□□ 0.64
TRIM39-201ENST00000376656 ZSCAN12O43309 604 aa19.05■□□□□ 0.64
TRIM39-201ENST00000376656 ATP8B1O43520 1251 aa19.05■□□□□ 0.64
TRIM39-201ENST00000376656 SYKP43405 635 aa19.05■□□□□ 0.64
TRIM39-201ENST00000376656 KIF23Q02241 960 aaPredicted RBP19.05■□□□□ 0.64
TRIM39-201ENST00000376656 SLC20A2Q08357 652 aa19.05■□□□□ 0.64
TRIM39-201ENST00000376656 A0A087WZG4 1122 aa19.04■□□□□ 0.64
TRIM39-201ENST00000376656 GOLGA8BA8MQT2 603 aa19.04■□□□□ 0.64
TRIM39-201ENST00000376656 SMC1AQ14683 1233 aaKnown RBP19.04■□□□□ 0.64
TRIM39-201ENST00000376656 CHMP4CQ96CF2 233 aa19.04■□□□□ 0.64
TRIM39-201ENST00000376656 FANCLQ9NW38 375 aa19.04■□□□□ 0.64
TRIM39-201ENST00000376656 GNL2Q13823 731 aaKnown RBP19.04■□□□□ 0.64
TRIM39-201ENST00000376656 LMBR1LQ6UX01 489 aa19.04■□□□□ 0.64
TRIM39-201ENST00000376656 TXLNBQ8N3L3 684 aa19.04■□□□□ 0.64
TRIM39-201ENST00000376656 INTS13Q9NVM9 706 aa19.04■□□□□ 0.64
TRIM39-201ENST00000376656 GNG11P61952 73 aa19.03■□□□□ 0.64
TRIM39-201ENST00000376656 KRBA2Q6ZNG9 492 aa19.03■□□□□ 0.64
TRIM39-201ENST00000376656 FCHSD1Q86WN1 690 aa19.03■□□□□ 0.64
TRIM39-201ENST00000376656 NFATC2IPQ8NCF5 419 aa19.03■□□□□ 0.64
TRIM39-201ENST00000376656 FEZ2Q9UHY8 353 aaPredicted RBP19.03■□□□□ 0.64
TRIM39-201ENST00000376656 CASQ1P31415 396 aa19.03■□□□□ 0.64
TRIM39-201ENST00000376656 MAP3K9P80192 1104 aa19.03■□□□□ 0.64
TRIM39-201ENST00000376656 HSP90AA4PQ58FG1 418 aa19.03■□□□□ 0.64
TRIM39-201ENST00000376656 KCNH5Q8NCM2 988 aa19.03■□□□□ 0.64
TRIM39-201ENST00000376656 MPHOSPH8Q99549 860 aa19.03■□□□□ 0.64
TRIM39-201ENST00000376656 TAOK2Q9UL54 1235 aa19.03■□□□□ 0.64
TRIM39-201ENST00000376656 RNF113AO15541 343 aaKnown RBP19.03■□□□□ 0.64
TRIM39-201ENST00000376656 ARHGAP6O43182 974 aa19.03■□□□□ 0.64
TRIM39-201ENST00000376656 SLC39A14Q15043 492 aa19.03■□□□□ 0.64
TRIM39-201ENST00000376656 ANKRD24Q8TF21 1146 aa19.03■□□□□ 0.64
TRIM39-201ENST00000376656 AFDNP55196 1824 aaKnown RBP19.03■□□□□ 0.64
TRIM39-201ENST00000376656 GYS2P54840 703 aa19.02■□□□□ 0.64
TRIM39-201ENST00000376656 PPP2R3AQ06190 1150 aa19.02■□□□□ 0.64
TRIM39-201ENST00000376656 SHC4Q6S5L8 630 aa19.02■□□□□ 0.64
TRIM39-201ENST00000376656 LRP10Q7Z4F1 713 aa19.02■□□□□ 0.64
TRIM39-201ENST00000376656 FBXL16Q8N461 479 aa19.02■□□□□ 0.64
TRIM39-201ENST00000376656 GPR161Q8N6U8 529 aaKnown RBP19.02■□□□□ 0.64
TRIM39-201ENST00000376656 PRC1O43663 620 aa19.02■□□□□ 0.64
TRIM39-201ENST00000376656 ATG9AQ7Z3C6 839 aa19.02■□□□□ 0.64
TRIM39-201ENST00000376656 OSBP2Q969R2 916 aa19.02■□□□□ 0.64
TRIM39-201ENST00000376656 MRFAP1Q9Y605 127 aa19.02■□□□□ 0.64
TRIM39-201ENST00000376656 CPLX1O14810 134 aa19.02■□□□□ 0.63
TRIM39-201ENST00000376656 RSRC2Q7L4I2 434 aaKnown RBP19.02■□□□□ 0.63
TRIM39-201ENST00000376656 AIFM3Q96NN9 605 aa19.02■□□□□ 0.63
TRIM39-201ENST00000376656 PARD6BQ9BYG5 372 aa19.02■□□□□ 0.63
TRIM39-201ENST00000376656 HPSEQ9Y251 543 aa19.02■□□□□ 0.63
TRIM39-201ENST00000376656 ARHGAP23Q9P227 1491 aa19.01■□□□□ 0.63
TRIM39-201ENST00000376656 TOGARAM2Q6ZUX3 1019 aa19.01■□□□□ 0.63
TRIM39-201ENST00000376656 RBM33Q96EV2 1170 aaKnown RBP19.01■□□□□ 0.63
TRIM39-201ENST00000376656 ZNF496Q96IT1 587 aaPredicted RBP19.01■□□□□ 0.63
TRIM39-201ENST00000376656 BAG1Q99933 345 aaPredicted RBP19.01■□□□□ 0.63
TRIM39-201ENST00000376656 TRIM34Q9BYJ4 488 aa19.01■□□□□ 0.63
TRIM39-201ENST00000376656 FOXP2O15409 715 aa19■□□□□ 0.63
TRIM39-201ENST00000376656 IFIT1P09914 478 aaKnown RBP19■□□□□ 0.63
TRIM39-201ENST00000376656 CASP7P55210 303 aa19■□□□□ 0.63
TRIM39-201ENST00000376656 PDILTQ8N807 584 aa19■□□□□ 0.63
TRIM39-201ENST00000376656 ARFGAP3Q9NP61 516 aa19■□□□□ 0.63
TRIM39-201ENST00000376656 DHX16O60231 1041 aaKnown RBP19■□□□□ 0.63
TRIM39-201ENST00000376656 PDE4BQ07343 736 aa19■□□□□ 0.63
TRIM39-201ENST00000376656 MUM1L1Q5H9M0 696 aa19■□□□□ 0.63
TRIM39-201ENST00000376656 FOXP4Q8IVH2 680 aaPredicted RBP19■□□□□ 0.63
TRIM39-201ENST00000376656 CLIC6Q96NY7 704 aa19■□□□□ 0.63
TRIM39-201ENST00000376656 FUT8Q9BYC5 575 aa19■□□□□ 0.63
TRIM39-201ENST00000376656 NWD2Q9ULI1 1742 aa19■□□□□ 0.63
TRIM39-201ENST00000376656 CDC27P30260 824 aa19■□□□□ 0.63
TRIM39-201ENST00000376656 ANTXR2P58335 489 aa19■□□□□ 0.63
TRIM39-201ENST00000376656 METTL16Q86W50 562 aaKnown RBP19■□□□□ 0.63
TRIM39-201ENST00000376656 KIFC2Q96AC6 838 aa19■□□□□ 0.63
TRIM39-201ENST00000376656 OLFM4Q6UX06 510 aa18.99■□□□□ 0.63
TRIM39-201ENST00000376656 ADKP55263 362 aaKnown RBP18.99■□□□□ 0.63
TRIM39-201ENST00000376656 TBX2Q13207 712 aaPredicted RBP18.99■□□□□ 0.63
TRIM39-201ENST00000376656 MB21D2Q8IYB1 491 aaPredicted RBP18.99■□□□□ 0.63
TRIM39-201ENST00000376656 DHX58Q96C10 678 aa18.99■□□□□ 0.63
TRIM39-201ENST00000376656 ARHGEF25Q86VW2 580 aa18.99■□□□□ 0.63
TRIM39-201ENST00000376656 GCP02774 474 aa18.98■□□□□ 0.63
TRIM39-201ENST00000376656 BMP6P22004 513 aa18.98■□□□□ 0.63
TRIM39-201ENST00000376656 FOXO4P98177 505 aa18.98■□□□□ 0.63
TRIM39-201ENST00000376656 LONRF3Q496Y0 759 aa18.98■□□□□ 0.63
TRIM39-201ENST00000376656 SLC52A2Q9HAB3 445 aa18.98■□□□□ 0.63
TRIM39-201ENST00000376656 AXIN2Q9Y2T1 843 aa18.98■□□□□ 0.63
TRIM39-201ENST00000376656 GPS2Q13227 327 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms