RNA–Protein interactions for RNA: ENST00000375472.7

SUSD3-202, Transcript of sushi domain containing 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SUSD3, Length 1,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD3-202ENST00000375472 LRRCC1Q9C099 1032 aa28.15■■■□□ 2.1
SUSD3-202ENST00000375472 HMG20BQ9P0W2 317 aa28.15■■■□□ 2.1
SUSD3-202ENST00000375472 CRKP46108 304 aa28.14■■■□□ 2.1
SUSD3-202ENST00000375472 USP48Q86UV5 1035 aa28.14■■■□□ 2.1
SUSD3-202ENST00000375472 IFIT2P09913 472 aaKnown RBP28.13■■■□□ 2.09
SUSD3-202ENST00000375472 GRIK5Q16478 980 aa28.13■■■□□ 2.09
SUSD3-202ENST00000375472 HHIPL2Q6UWX4 724 aa28.13■■■□□ 2.09
SUSD3-202ENST00000375472 APOBEC3FQ8IUX4 373 aaKnown RBP28.13■■■□□ 2.09
SUSD3-202ENST00000375472 CREBZFQ9NS37 354 aa28.13■■■□□ 2.09
SUSD3-202ENST00000375472 ASTN2O75129 1339 aaPredicted RBP28.13■■■□□ 2.09
SUSD3-202ENST00000375472 TMEM88BA6NKF7 163 aa28.12■■■□□ 2.09
SUSD3-202ENST00000375472 IGSF3O75054 1194 aa28.12■■■□□ 2.09
SUSD3-202ENST00000375472 MCAMP43121 646 aa28.12■■■□□ 2.09
SUSD3-202ENST00000375472 PRMT6Q96LA8 375 aaPredicted RBP28.12■■■□□ 2.09
SUSD3-202ENST00000375472 ZDHHC15Q96MV8 337 aa28.11■■■□□ 2.09
SUSD3-202ENST00000375472 TLR7Q9NYK1 1049 aaKnown RBP28.11■■■□□ 2.09
SUSD3-202ENST00000375472 TRAF5O00463 557 aa28.1■■■□□ 2.09
SUSD3-202ENST00000375472 PRDX5P30044 214 aa28.1■■■□□ 2.09
SUSD3-202ENST00000375472 HDAC1Q13547 482 aaPredicted RBP28.1■■■□□ 2.09
SUSD3-202ENST00000375472 SLF2Q8IX21 1173 aa28.1■■■□□ 2.09
SUSD3-202ENST00000375472 EXOC6Q8TAG9 804 aa28.1■■■□□ 2.09
SUSD3-202ENST00000375472 ABCF2Q9UG63 623 aa28.1■■■□□ 2.09
SUSD3-202ENST00000375472 POLR2AP24928 1970 aaKnown RBP28.1■■■□□ 2.09
SUSD3-202ENST00000375472 ERICH6Q7L0X2 663 aa28.09■■■□□ 2.09
SUSD3-202ENST00000375472 ADM5C9JUS6 153 aa28.08■■■□□ 2.09
SUSD3-202ENST00000375472 ECM29Q5VYK3 1845 aa28.08■■■□□ 2.09
SUSD3-202ENST00000375472 TRPM7Q96QT4 1865 aa28.08■■■□□ 2.09
SUSD3-202ENST00000375472 DZIP1Q86YF9 867 aaKnown RBP28.07■■■□□ 2.08
SUSD3-202ENST00000375472 PPIL4Q8WUA2 492 aaKnown RBP eCLIP28.07■■■□□ 2.08
SUSD3-202ENST00000375472 PCDHAC2Q9Y5I4 1007 aa28.07■■■□□ 2.08
SUSD3-202ENST00000375472 CELF2O95319 508 aaKnown RBP28.06■■■□□ 2.08
SUSD3-202ENST00000375472 TNFAIP1Q13829 316 aa28.06■■■□□ 2.08
SUSD3-202ENST00000375472 SPDYE2Q495Y8 402 aa28.06■■■□□ 2.08
SUSD3-202ENST00000375472 PI16Q6UXB8 463 aa28.06■■■□□ 2.08
SUSD3-202ENST00000375472 GCC1Q96CN9 775 aa28.06■■■□□ 2.08
SUSD3-202ENST00000375472 PPP2R3BQ9Y5P8 575 aa28.06■■■□□ 2.08
SUSD3-202ENST00000375472 CST9Q5W186 159 aa28.05■■■□□ 2.08
SUSD3-202ENST00000375472 RWDD1Q9H446 243 aaPredicted RBP28.05■■■□□ 2.08
SUSD3-202ENST00000375472 ZNF70Q9UC06 446 aaPredicted RBP28.05■■■□□ 2.08
SUSD3-202ENST00000375472 GSTO1P78417 241 aa28.04■■■□□ 2.08
SUSD3-202ENST00000375472 FMR1Q06787 632 aaKnown RBP eCLIP28.04■■■□□ 2.08
SUSD3-202ENST00000375472 APOBEC3HQ6NTF7 200 aaKnown RBP28.04■■■□□ 2.08
SUSD3-202ENST00000375472 CDCA5Q96FF9 252 aa28.04■■■□□ 2.08
SUSD3-202ENST00000375472 FAM163AQ96GL9 167 aaPredicted RBP28.04■■■□□ 2.08
SUSD3-202ENST00000375472 TDRD3Q9H7E2 651 aaKnown RBP28.04■■■□□ 2.08
SUSD3-202ENST00000375472 SNRKQ9NRH2 765 aa28.04■■■□□ 2.08
SUSD3-202ENST00000375472 LRP2BPQ9P2M1 347 aa28.04■■■□□ 2.08
SUSD3-202ENST00000375472 AKAP11Q9UKA4 1901 aa28.03■■■□□ 2.08
SUSD3-202ENST00000375472 CLRN2A0PK11 232 aa28.03■■■□□ 2.08
SUSD3-202ENST00000375472 VEZTQ9HBM0 779 aa28.03■■■□□ 2.08
SUSD3-202ENST00000375472 TMOD2Q9NZR1 351 aa28.03■■■□□ 2.08
SUSD3-202ENST00000375472 CYP2E1P05181 493 aaPredicted RBP28.02■■■□□ 2.08
SUSD3-202ENST00000375472 LDHCP07864 332 aa28.02■■■□□ 2.08
SUSD3-202ENST00000375472 ZAP70P43403 619 aa28.02■■■□□ 2.08
SUSD3-202ENST00000375472 TNNI2P48788 182 aa28.02■■■□□ 2.08
SUSD3-202ENST00000375472 DIXDC1Q155Q3 683 aa28.02■■■□□ 2.08
SUSD3-202ENST00000375472 TBC1D9Q6ZT07 1266 aa28.02■■■□□ 2.08
SUSD3-202ENST00000375472 DEFB129Q9H1M3 183 aa28.02■■■□□ 2.08
SUSD3-202ENST00000375472 ZNF408Q9H9D4 720 aa28.02■■■□□ 2.08
SUSD3-202ENST00000375472 RAI14Q9P0K7 980 aa28.02■■■□□ 2.08
SUSD3-202ENST00000375472 ZBTB47Q9UFB7 747 aaPredicted RBP28.02■■■□□ 2.08
SUSD3-202ENST00000375472 DAGLAQ9Y4D2 1042 aa28.02■■■□□ 2.08
SUSD3-202ENST00000375472 GAKO14976 1311 aa28.01■■■□□ 2.07
SUSD3-202ENST00000375472 SMARCA5O60264 1052 aaPredicted RBP28.01■■■□□ 2.07
SUSD3-202ENST00000375472 NF2P35240 595 aa28.01■■■□□ 2.07
SUSD3-202ENST00000375472 MECOMQ03112 1051 aa28.01■■■□□ 2.07
SUSD3-202ENST00000375472 FKBP1CQ5VVH2 108 aa28.01■■■□□ 2.07
SUSD3-202ENST00000375472 BCL11AQ9H165 835 aa28.01■■■□□ 2.07
SUSD3-202ENST00000375472 HTRA3P83110 453 aa28■■■□□ 2.07
SUSD3-202ENST00000375472 TMED8Q6PL24 325 aaPredicted RBP28■■■□□ 2.07
SUSD3-202ENST00000375472 C2orf69Q8N8R5 385 aa28■■■□□ 2.07
SUSD3-202ENST00000375472 NSUN4Q96CB9 384 aaKnown RBP28■■■□□ 2.07
SUSD3-202ENST00000375472 GPATCH3Q96I76 525 aa28■■■□□ 2.07
SUSD3-202ENST00000375472 ABT1Q9ULW3 272 aaKnown RBP28■■■□□ 2.07
SUSD3-202ENST00000375472 AOX1Q06278 1338 aa27.99■■■□□ 2.07
SUSD3-202ENST00000375472 ATP5JP18859 108 aa27.99■■■□□ 2.07
SUSD3-202ENST00000375472 FKBP1BP68106 108 aa27.99■■■□□ 2.07
SUSD3-202ENST00000375472 TTF1Q15361 905 aaPredicted RBP27.99■■■□□ 2.07
SUSD3-202ENST00000375472 GBA2Q9HCG7 927 aaPredicted RBP27.99■■■□□ 2.07
SUSD3-202ENST00000375472 TLL2Q9Y6L7 1015 aa27.99■■■□□ 2.07
SUSD3-202ENST00000375472 MROH7-TTC4A0A0A0MT08 1334 aa27.98■■■□□ 2.07
SUSD3-202ENST00000375472 DLK2Q6UY11 383 aa27.98■■■□□ 2.07
SUSD3-202ENST00000375472 SCAF8Q9UPN6 1271 aaKnown RBP27.98■■■□□ 2.07
SUSD3-202ENST00000375472 MYH2Q9UKX2 1941 aa27.97■■■□□ 2.07
SUSD3-202ENST00000375472 RASSF10A6NK89 507 aa27.97■■■□□ 2.07
SUSD3-202ENST00000375472 MAP4K4O95819 1239 aaPredicted RBP27.97■■■□□ 2.07
SUSD3-202ENST00000375472 RASA3Q14644 834 aa27.97■■■□□ 2.07
SUSD3-202ENST00000375472 SUPT20HL1Q3ZLR7 823 aa27.97■■■□□ 2.07
SUSD3-202ENST00000375472 FAM83AQ86UY5 434 aa27.97■■■□□ 2.07
SUSD3-202ENST00000375472 DNAJC5GQ8N7S2 189 aa27.97■■■□□ 2.07
SUSD3-202ENST00000375472 HHIPL1Q96JK4 782 aa27.97■■■□□ 2.07
SUSD3-202ENST00000375472 ECHDC1Q9NTX5 307 aa27.97■■■□□ 2.07
SUSD3-202ENST00000375472 IRX6P78412 446 aaPredicted RBP27.96■■■□□ 2.07
SUSD3-202ENST00000375472 DEFB115Q30KQ5 88 aa27.96■■■□□ 2.07
SUSD3-202ENST00000375472 SAPCD2Q86UD0 394 aa27.96■■■□□ 2.07
SUSD3-202ENST00000375472 KLRG1Q96E93 195 aa27.96■■■□□ 2.07
SUSD3-202ENST00000375472 GPR75-ASB3A0A0A6YYF3 556 aa27.95■■■□□ 2.06
SUSD3-202ENST00000375472 MAP3K12Q12852 859 aa27.95■■■□□ 2.06
SUSD3-202ENST00000375472 NAA16Q6N069 864 aaPredicted RBP27.95■■■□□ 2.06
SUSD3-202ENST00000375472 CDC42EP5Q6NZY7 148 aa27.95■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms