RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 RPGRQ92834 1020 aaKnown RBP29.5■■■□□ 2.31
CTSA-203ENST00000372459 WDR19Q8NEZ3 1342 aa29.5■■■□□ 2.31
CTSA-203ENST00000372459 DTNBO60941 627 aa29.5■■■□□ 2.31
CTSA-203ENST00000372459 KLRK1P26718 216 aa29.5■■■□□ 2.31
CTSA-203ENST00000372459 SCRN1Q12765 414 aa29.5■■■□□ 2.31
CTSA-203ENST00000372459 IFNL3Q8IZI9 196 aa29.5■■■□□ 2.31
CTSA-203ENST00000372459 ZNF274Q96GC6 653 aaPredicted RBP29.5■■■□□ 2.31
CTSA-203ENST00000372459 LLPHQ9BRT6 129 aaKnown RBP29.5■■■□□ 2.31
CTSA-203ENST00000372459 CYP7A1P22680 504 aa29.49■■■□□ 2.31
CTSA-203ENST00000372459 CHMP4CQ96CF2 233 aa29.49■■■□□ 2.31
CTSA-203ENST00000372459 NAPBQ9H115 298 aa29.49■■■□□ 2.31
CTSA-203ENST00000372459 GOLGA6L3A6NEY3 463 aa29.48■■■□□ 2.31
CTSA-203ENST00000372459 PRC1O43663 620 aa29.48■■■□□ 2.31
CTSA-203ENST00000372459 CRY2Q49AN0 593 aa29.48■■■□□ 2.31
CTSA-203ENST00000372459 NBPF3Q9H094 633 aa29.48■■■□□ 2.31
CTSA-203ENST00000372459 VPS37CA5D8V6 355 aaPredicted RBP29.48■■■□□ 2.31
CTSA-203ENST00000372459 FOXD4L6Q3SYB3 417 aaPredicted RBP29.48■■■□□ 2.31
CTSA-203ENST00000372459 FOXD4L3Q6VB84 417 aaPredicted RBP29.48■■■□□ 2.31
CTSA-203ENST00000372459 LCORLQ8N3X6 602 aa29.48■■■□□ 2.31
CTSA-203ENST00000372459 NACAP1Q9BZK3 213 aa29.48■■■□□ 2.31
CTSA-203ENST00000372459 EPB41L4AQ9HCS5 686 aaPredicted RBP29.48■■■□□ 2.31
CTSA-203ENST00000372459 TFCP2L1Q9NZI6 479 aa29.48■■■□□ 2.31
CTSA-203ENST00000372459 APBA3O96018 575 aa29.47■■■□□ 2.31
CTSA-203ENST00000372459 EVCP57679 992 aa29.47■■■□□ 2.31
CTSA-203ENST00000372459 ANKIB1Q9P2G1 1089 aa29.47■■■□□ 2.31
CTSA-203ENST00000372459 LEMD3Q9Y2U8 911 aa29.47■■■□□ 2.31
CTSA-203ENST00000372459 GSG1L2A8MUP6 293 aa29.46■■■□□ 2.31
CTSA-203ENST00000372459 ZBTB22O15209 634 aa29.46■■■□□ 2.31
CTSA-203ENST00000372459 RXRBP28702 533 aa29.46■■■□□ 2.31
CTSA-203ENST00000372459 TBC1D10CQ8IV04 446 aa29.46■■■□□ 2.31
CTSA-203ENST00000372459 SLC4A4Q9Y6R1 1079 aa29.46■■■□□ 2.31
CTSA-203ENST00000372459 MIGA1Q8NAN2 632 aa29.46■■■□□ 2.31
CTSA-203ENST00000372459 MYH13Q9UKX3 1938 aa29.46■■■□□ 2.31
CTSA-203ENST00000372459 POLRMTO00411 1230 aaKnown RBP29.45■■■□□ 2.31
CTSA-203ENST00000372459 NCLP19338 710 aaKnown RBP29.45■■■□□ 2.31
CTSA-203ENST00000372459 PDIA3P30101 505 aaKnown RBP29.45■■■□□ 2.31
CTSA-203ENST00000372459 RBM17Q96I25 401 aaKnown RBP29.45■■■□□ 2.31
CTSA-203ENST00000372459 XDHP47989 1333 aa29.45■■■□□ 2.3
CTSA-203ENST00000372459 JAK2O60674 1132 aa29.44■■■□□ 2.3
CTSA-203ENST00000372459 DDR1Q08345 913 aa29.44■■■□□ 2.3
CTSA-203ENST00000372459 FAM43AQ8N2R8 423 aa29.44■■■□□ 2.3
CTSA-203ENST00000372459 SMARCC2Q8TAQ2 1214 aa29.44■■■□□ 2.3
CTSA-203ENST00000372459 ISY1Q9ULR0 285 aaKnown RBP29.44■■■□□ 2.3
CTSA-203ENST00000372459 NAP1L2Q9ULW6 460 aaPredicted RBP29.44■■■□□ 2.3
CTSA-203ENST00000372459 IRS2Q9Y4H2 1338 aa29.44■■■□□ 2.3
CTSA-203ENST00000372459 MAGEB6P1A0A0J9YX57 407 aa29.44■■■□□ 2.3
CTSA-203ENST00000372459 ANTXR2P58335 489 aa29.44■■■□□ 2.3
CTSA-203ENST00000372459 CACNA1SQ13698 1873 aa29.43■■■□□ 2.3
CTSA-203ENST00000372459 MBD3O95983 291 aa29.43■■■□□ 2.3
CTSA-203ENST00000372459 GPT2Q8TD30 523 aa29.43■■■□□ 2.3
CTSA-203ENST00000372459 PRKAB2O43741 272 aa29.43■■■□□ 2.3
CTSA-203ENST00000372459 TDO2P48775 406 aa29.43■■■□□ 2.3
CTSA-203ENST00000372459 ZNF827Q17R98 1081 aa29.43■■■□□ 2.3
CTSA-203ENST00000372459 NAA16Q6N069 864 aaPredicted RBP29.43■■■□□ 2.3
CTSA-203ENST00000372459 ADGRA1Q86SQ6 560 aa29.43■■■□□ 2.3
CTSA-203ENST00000372459 AKT1S1Q96B36 256 aa29.43■■■□□ 2.3
CTSA-203ENST00000372459 HMGN5P82970 282 aaKnown RBP29.42■■■□□ 2.3
CTSA-203ENST00000372459 TMEM87AQ8NBN3 555 aa29.42■■■□□ 2.3
CTSA-203ENST00000372459 NSUN7Q8NE18 718 aaKnown RBP29.42■■■□□ 2.3
CTSA-203ENST00000372459 CCT2P78371 535 aaKnown RBP29.41■■■□□ 2.3
CTSA-203ENST00000372459 CDC37L1Q7L3B6 337 aa29.41■■■□□ 2.3
CTSA-203ENST00000372459 TXNRD3Q86VQ6 643 aa29.41■■■□□ 2.3
CTSA-203ENST00000372459 FAM184AQ8NB25 1140 aa29.41■■■□□ 2.3
CTSA-203ENST00000372459 USP48Q86UV5 1035 aa29.41■■■□□ 2.3
CTSA-203ENST00000372459 GPHNQ9NQX3 736 aaPredicted RBP29.41■■■□□ 2.3
CTSA-203ENST00000372459 KIF3AQ9Y496 699 aa29.41■■■□□ 2.3
CTSA-203ENST00000372459 TCHHQ07283 1943 aa29.4■■■□□ 2.3
CTSA-203ENST00000372459 CAVIN1Q6NZI2 390 aaKnown RBP29.4■■■□□ 2.3
CTSA-203ENST00000372459 TIAM2Q8IVF5 1701 aa29.39■■■□□ 2.3
CTSA-203ENST00000372459 TMED8Q6PL24 325 aaPredicted RBP29.39■■■□□ 2.3
CTSA-203ENST00000372459 CNNM2Q9H8M5 875 aa29.39■■■□□ 2.3
CTSA-203ENST00000372459 GDPD2Q9HCC8 539 aa29.39■■■□□ 2.3
CTSA-203ENST00000372459 CNPY2Q9Y2B0 182 aa29.39■■■□□ 2.3
CTSA-203ENST00000372459 PTPDC1A2A3K4 754 aa29.39■■■□□ 2.29
CTSA-203ENST00000372459 CTDNEP1O95476 244 aa29.39■■■□□ 2.29
CTSA-203ENST00000372459 CHAF1AQ13111 956 aaPredicted RBP29.39■■■□□ 2.29
CTSA-203ENST00000372459 NLGN1Q8N2Q7 840 aa29.39■■■□□ 2.29
CTSA-203ENST00000372459 FLAD1Q8NFF5 587 aa29.39■■■□□ 2.29
CTSA-203ENST00000372459 DDX11Q96FC9 970 aa29.39■■■□□ 2.29
CTSA-203ENST00000372459 RIOK1Q9BRS2 568 aaKnown RBP29.39■■■□□ 2.29
CTSA-203ENST00000372459 NEDD4P46934 1319 aa29.38■■■□□ 2.29
CTSA-203ENST00000372459 KLF18A0A0U1RQI7 1052 aa29.38■■■□□ 2.29
CTSA-203ENST00000372459 B4E1Z4 1266 aa29.38■■■□□ 2.29
CTSA-203ENST00000372459 BBOX1O75936 387 aa29.38■■■□□ 2.29
CTSA-203ENST00000372459 HOXA10P31260 410 aaPredicted RBP29.38■■■□□ 2.29
CTSA-203ENST00000372459 CSPP1Q1MSJ5 1256 aa29.38■■■□□ 2.29
CTSA-203ENST00000372459 NSUN4Q96CB9 384 aaKnown RBP29.38■■■□□ 2.29
CTSA-203ENST00000372459 NCOA5Q9HCD5 579 aaKnown RBP29.38■■■□□ 2.29
CTSA-203ENST00000372459 CHD4Q14839 1912 aa29.38■■■□□ 2.29
CTSA-203ENST00000372459 XRCC6P12956 609 aaKnown RBP eCLIP29.37■■■□□ 2.29
CTSA-203ENST00000372459 CTDSPL2Q05D32 466 aa29.37■■■□□ 2.29
CTSA-203ENST00000372459 AKNAD1Q5T1N1 836 aa29.37■■■□□ 2.29
CTSA-203ENST00000372459 C15orf52Q6ZUT6 534 aaKnown RBP29.37■■■□□ 2.29
CTSA-203ENST00000372459 CYB5R4Q7L1T6 521 aa29.37■■■□□ 2.29
CTSA-203ENST00000372459 TMEM87BQ96K49 555 aa29.37■■■□□ 2.29
CTSA-203ENST00000372459 ANGEL1Q9UNK9 670 aaKnown RBP29.37■■■□□ 2.29
CTSA-203ENST00000372459 KLRG2A4D1S0 409 aaPredicted RBP29.37■■■□□ 2.29
CTSA-203ENST00000372459 COL23A1Q86Y22 540 aaPredicted RBP29.37■■■□□ 2.29
CTSA-203ENST00000372459 KRT23Q9C075 422 aa29.37■■■□□ 2.29
CTSA-203ENST00000372459 DHX16O60231 1041 aaKnown RBP29.36■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 711.2 ms