RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 PHEXP78562 749 aa17.07■□□□□ 0.32
COL5A1-201ENST00000371817 GOLGA8KD6RF30 607 aa17.07■□□□□ 0.32
COL5A1-201ENST00000371817 PPP1R21Q6ZMI0 780 aa17.07■□□□□ 0.32
COL5A1-201ENST00000371817 ABTB2Q8N961 1025 aa17.07■□□□□ 0.32
COL5A1-201ENST00000371817 RPGRIP1Q96KN7 1286 aa17.07■□□□□ 0.32
COL5A1-201ENST00000371817 MCM7P33993 719 aa17.07■□□□□ 0.32
COL5A1-201ENST00000371817 CENPKQ9BS16 269 aa17.07■□□□□ 0.32
COL5A1-201ENST00000371817 SSH1Q8WYL5 1049 aa17.07■□□□□ 0.32
COL5A1-201ENST00000371817 NCAPGQ9BPX3 1015 aa17.07■□□□□ 0.32
COL5A1-201ENST00000371817 IMPG2Q9BZV3 1241 aa17.07■□□□□ 0.32
COL5A1-201ENST00000371817 MYO10Q9HD67 2058 aa17.07■□□□□ 0.32
COL5A1-201ENST00000371817 SUPT6HQ7KZ85 1726 aaKnown RBP17.07■□□□□ 0.32
COL5A1-201ENST00000371817 PCYT1AP49585 367 aa17.07■□□□□ 0.32
COL5A1-201ENST00000371817 ASIC1P78348 528 aa17.07■□□□□ 0.32
COL5A1-201ENST00000371817 DRC3Q9H069 523 aa17.07■□□□□ 0.32
COL5A1-201ENST00000371817 TMPOP42166 694 aaKnown RBP17.07■□□□□ 0.32
COL5A1-201ENST00000371817 CFAP221Q4G0U5 840 aa17.07■□□□□ 0.32
COL5A1-201ENST00000371817 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.06■□□□□ 0.32
COL5A1-201ENST00000371817 ARHGAP42A6NI28 874 aa17.06■□□□□ 0.32
COL5A1-201ENST00000371817 KRT71Q3SY84 523 aa17.06■□□□□ 0.32
COL5A1-201ENST00000371817 MSANTD4Q8NCY6 345 aa17.06■□□□□ 0.32
COL5A1-201ENST00000371817 FAM71BQ8TC56 605 aa17.06■□□□□ 0.32
COL5A1-201ENST00000371817 NOX5Q96PH1 765 aa17.06■□□□□ 0.32
COL5A1-201ENST00000371817 SAMM50Q9Y512 469 aa17.06■□□□□ 0.32
COL5A1-201ENST00000371817 GNGT1P63211 74 aa17.06■□□□□ 0.32
COL5A1-201ENST00000371817 YY1AP1Q9H869 796 aa17.06■□□□□ 0.32
COL5A1-201ENST00000371817 PALMDQ9NP74 551 aa17.06■□□□□ 0.32
COL5A1-201ENST00000371817 AK9Q5TCS8 1911 aa17.06■□□□□ 0.32
COL5A1-201ENST00000371817 MYL5Q02045 173 aa17.06■□□□□ 0.32
COL5A1-201ENST00000371817 PDZD8Q8NEN9 1154 aa17.06■□□□□ 0.32
COL5A1-201ENST00000371817 KIF1CO43896 1103 aaKnown RBP17.06■□□□□ 0.32
COL5A1-201ENST00000371817 TSC22D3Q99576 134 aa17.06■□□□□ 0.32
COL5A1-201ENST00000371817 RILPL1Q5EBL4 403 aa17.06■□□□□ 0.32
COL5A1-201ENST00000371817 ALG1Q9BT22 464 aa17.05■□□□□ 0.32
COL5A1-201ENST00000371817 AGTPBP1Q9UPW5 1226 aa17.05■□□□□ 0.32
COL5A1-201ENST00000371817 CABP4P57796 275 aa17.05■□□□□ 0.32
COL5A1-201ENST00000371817 SMC5Q8IY18 1101 aa17.05■□□□□ 0.32
COL5A1-201ENST00000371817 IGSF22Q8N9C0 903 aa17.05■□□□□ 0.32
COL5A1-201ENST00000371817 MFSD6Q6ZSS7 791 aa17.05■□□□□ 0.32
COL5A1-201ENST00000371817 RGS16O15492 202 aaPredicted RBP17.05■□□□□ 0.32
COL5A1-201ENST00000371817 IRX5P78411 483 aaPredicted RBP17.05■□□□□ 0.32
COL5A1-201ENST00000371817 CAVIN4Q5BKX8 364 aa17.05■□□□□ 0.32
COL5A1-201ENST00000371817 RAD50Q92878 1312 aa17.05■□□□□ 0.32
COL5A1-201ENST00000371817 EVI5O60447 810 aa17.05■□□□□ 0.32
COL5A1-201ENST00000371817 MAN1A2O60476 641 aa17.05■□□□□ 0.32
COL5A1-201ENST00000371817 SYF2O95926 243 aaKnown RBP17.05■□□□□ 0.32
COL5A1-201ENST00000371817 NUTM2GQ5VZR2 741 aa17.05■□□□□ 0.32
COL5A1-201ENST00000371817 TAF7Q15545 349 aaPredicted RBP17.05■□□□□ 0.32
COL5A1-201ENST00000371817 LGSNQ5TDP6 509 aa17.05■□□□□ 0.32
COL5A1-201ENST00000371817 CCT6AP40227 531 aaKnown RBP17.04■□□□□ 0.32
COL5A1-201ENST00000371817 HAUS1Q96CS2 278 aa17.04■□□□□ 0.32
COL5A1-201ENST00000371817 SERPINB6P35237 376 aa17.04■□□□□ 0.32
COL5A1-201ENST00000371817 RBM42Q9BTD8 480 aaKnown RBP17.04■□□□□ 0.32
COL5A1-201ENST00000371817 MGARPQ8TDB4 240 aa17.04■□□□□ 0.32
COL5A1-201ENST00000371817 PPP4R1Q8TF05 950 aa17.04■□□□□ 0.32
COL5A1-201ENST00000371817 DDX41Q9UJV9 622 aaKnown RBP17.04■□□□□ 0.32
COL5A1-201ENST00000371817 PTPRCP08575 1304 aa17.04■□□□□ 0.32
COL5A1-201ENST00000371817 STX2P32856 288 aa17.04■□□□□ 0.32
COL5A1-201ENST00000371817 GABPB2Q8TAK5 448 aaPredicted RBP17.04■□□□□ 0.32
COL5A1-201ENST00000371817 PARP2Q9UGN5 583 aa17.04■□□□□ 0.32
COL5A1-201ENST00000371817 NECAB1Q8N987 351 aa17.04■□□□□ 0.32
COL5A1-201ENST00000371817 LEO1Q8WVC0 666 aaPredicted RBP17.04■□□□□ 0.32
COL5A1-201ENST00000371817 TSKSQ9UJT2 592 aa17.04■□□□□ 0.32
COL5A1-201ENST00000371817 KRT15P19012 456 aa17.04■□□□□ 0.32
COL5A1-201ENST00000371817 POLE2P56282 527 aa17.04■□□□□ 0.32
COL5A1-201ENST00000371817 VWA3BQ502W6 1294 aa17.04■□□□□ 0.32
COL5A1-201ENST00000371817 SRGAP1Q7Z6B7 1085 aa17.04■□□□□ 0.32
COL5A1-201ENST00000371817 RAB17Q9H0T7 212 aa17.04■□□□□ 0.32
COL5A1-201ENST00000371817 HOMER3Q9NSC5 361 aa17.03■□□□□ 0.32
COL5A1-201ENST00000371817 NUCB1Q02818 461 aa17.03■□□□□ 0.32
COL5A1-201ENST00000371817 FBXO41Q8TF61 875 aa17.03■□□□□ 0.32
COL5A1-201ENST00000371817 NFE2L2Q16236 605 aa17.03■□□□□ 0.32
COL5A1-201ENST00000371817 ATL3Q6DD88 541 aa17.03■□□□□ 0.32
COL5A1-201ENST00000371817 CRACR2BQ8N4Y2 399 aaPredicted RBP17.03■□□□□ 0.32
COL5A1-201ENST00000371817 SDCCAG3Q96C92 435 aa17.03■□□□□ 0.32
COL5A1-201ENST00000371817 RBSNQ9H1K0 784 aa17.03■□□□□ 0.32
COL5A1-201ENST00000371817 ABCC11Q96J66 1382 aa17.03■□□□□ 0.32
COL5A1-201ENST00000371817 ARHGAP6O43182 974 aa17.03■□□□□ 0.32
COL5A1-201ENST00000371817 INTS4Q96HW7 963 aaKnown RBP17.02■□□□□ 0.32
COL5A1-201ENST00000371817 SF3A3Q12874 501 aaKnown RBP eCLIP17.02■□□□□ 0.32
COL5A1-201ENST00000371817 DHX58Q96C10 678 aa17.02■□□□□ 0.32
COL5A1-201ENST00000371817 SPDL1Q96EA4 605 aa17.02■□□□□ 0.32
COL5A1-201ENST00000371817 CREB3O43889 395 aa17.02■□□□□ 0.31
COL5A1-201ENST00000371817 PDE4BQ07343 736 aa17.02■□□□□ 0.31
COL5A1-201ENST00000371817 WDR78Q5VTH9 848 aa17.02■□□□□ 0.31
COL5A1-201ENST00000371817 NRBF2Q96F24 287 aa17.02■□□□□ 0.31
COL5A1-201ENST00000371817 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.02■□□□□ 0.31
COL5A1-201ENST00000371817 SPOPO43791 374 aa17.02■□□□□ 0.31
COL5A1-201ENST00000371817 MRRFQ96E11 262 aaKnown RBP17.02■□□□□ 0.31
COL5A1-201ENST00000371817 FRMD4BQ9Y2L6 1034 aa17.02■□□□□ 0.31
COL5A1-201ENST00000371817 RNASE9P60153 205 aaKnown RBP17.02■□□□□ 0.31
COL5A1-201ENST00000371817 TRIM27P14373 513 aa17.01■□□□□ 0.31
COL5A1-201ENST00000371817 KAT14Q9H8E8 782 aa17.01■□□□□ 0.31
COL5A1-201ENST00000371817 EPS15L1Q9UBC2 864 aa17.01■□□□□ 0.31
COL5A1-201ENST00000371817 MYH10P35580 1976 aa17.01■□□□□ 0.31
COL5A1-201ENST00000371817 ZBTB43O43298 467 aa17.01■□□□□ 0.31
COL5A1-201ENST00000371817 CTNNA1P35221 906 aaKnown RBP17.01■□□□□ 0.31
COL5A1-201ENST00000371817 E2F4Q16254 413 aa17.01■□□□□ 0.31
COL5A1-201ENST00000371817 CCT5P48643 541 aa17.01■□□□□ 0.31
COL5A1-201ENST00000371817 HELBQ8NG08 1087 aaPredicted RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms