RNA–Protein interactions for RNA: ENST00000366977.7

NSL1-202, Transcript of NSL1, MIS12 kinetochore complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSL1, Length 2,317 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSL1-202ENST00000366977 PLA2G12BQ9BX93 195 aa12.88□□□□□ -0.35
NSL1-202ENST00000366977 AKAP2Q9Y2D5 859 aa12.88□□□□□ -0.35
NSL1-202ENST00000366977 DDX60Q8IY21 1712 aaKnown RBP12.88□□□□□ -0.35
NSL1-202ENST00000366977 NUP98P52948 1817 aa12.88□□□□□ -0.35
NSL1-202ENST00000366977 SPEF2Q9C093 1822 aa12.88□□□□□ -0.35
NSL1-202ENST00000366977 USP27XA6NNY8 438 aa12.88□□□□□ -0.35
NSL1-202ENST00000366977 ZNF213O14771 459 aa12.88□□□□□ -0.35
NSL1-202ENST00000366977 PRKAB2O43741 272 aa12.88□□□□□ -0.35
NSL1-202ENST00000366977 MARCKSP29966 332 aaPredicted RBP12.88□□□□□ -0.35
NSL1-202ENST00000366977 TRIM28Q13263 835 aaKnown RBP12.88□□□□□ -0.35
NSL1-202ENST00000366977 ZSCAN25Q6NSZ9 544 aa12.88□□□□□ -0.35
NSL1-202ENST00000366977 C8orf76Q96K31 380 aa12.88□□□□□ -0.35
NSL1-202ENST00000366977 PRDM4Q9UKN5 801 aa12.88□□□□□ -0.35
NSL1-202ENST00000366977 RIOK3O14730 519 aaKnown RBP12.87□□□□□ -0.35
NSL1-202ENST00000366977 PTPN21Q16825 1174 aa12.87□□□□□ -0.35
NSL1-202ENST00000366977 FMR1NBQ8N0W7 255 aaPredicted RBP12.87□□□□□ -0.35
NSL1-202ENST00000366977 LINC00301Q8NCQ3 95 aa12.87□□□□□ -0.35
NSL1-202ENST00000366977 ACSBG1Q96GR2 724 aa12.87□□□□□ -0.35
NSL1-202ENST00000366977 EPB41L4AQ9HCS5 686 aaPredicted RBP12.87□□□□□ -0.35
NSL1-202ENST00000366977 CLIP2Q9UDT6 1046 aa12.87□□□□□ -0.35
NSL1-202ENST00000366977 MROH7-TTC4A0A0A0MT08 1334 aa12.87□□□□□ -0.35
NSL1-202ENST00000366977 ANKRD18BA2A2Z9 1011 aa12.87□□□□□ -0.35
NSL1-202ENST00000366977 WDHD1O75717 1129 aaPredicted RBP12.87□□□□□ -0.35
NSL1-202ENST00000366977 EVCP57679 992 aa12.87□□□□□ -0.35
NSL1-202ENST00000366977 NAA30Q147X3 362 aaPredicted RBP12.87□□□□□ -0.35
NSL1-202ENST00000366977 ECM29Q5VYK3 1845 aa12.87□□□□□ -0.35
NSL1-202ENST00000366977 AOPEPQ8N6M6 819 aa12.87□□□□□ -0.35
NSL1-202ENST00000366977 NCOA7Q8NI08 942 aa12.87□□□□□ -0.35
NSL1-202ENST00000366977 C16orf45Q96MC5 204 aaPredicted RBP12.87□□□□□ -0.35
NSL1-202ENST00000366977 IQSEC3Q9UPP2 1182 aaPredicted RBP12.87□□□□□ -0.35
NSL1-202ENST00000366977 LRP6O75581 1613 aa12.86□□□□□ -0.35
NSL1-202ENST00000366977 DYNC1I1O14576 645 aa12.86□□□□□ -0.35
NSL1-202ENST00000366977 STARD3NLO95772 234 aa12.86□□□□□ -0.35
NSL1-202ENST00000366977 PDE6AP16499 860 aa12.86□□□□□ -0.35
NSL1-202ENST00000366977 DPCR1Q3MIW9 517 aa12.86□□□□□ -0.35
NSL1-202ENST00000366977 SUSD4Q5VX71 490 aa12.86□□□□□ -0.35
NSL1-202ENST00000366977 CCDC73Q6ZRK6 1079 aa12.86□□□□□ -0.35
NSL1-202ENST00000366977 MICU3Q86XE3 530 aa12.86□□□□□ -0.35
NSL1-202ENST00000366977 CMTR1Q8N1G2 835 aaKnown RBP12.86□□□□□ -0.35
NSL1-202ENST00000366977 ZKSCAN3Q9BRR0 538 aa12.86□□□□□ -0.35
NSL1-202ENST00000366977 MYH3P11055 1940 aa12.86□□□□□ -0.35
NSL1-202ENST00000366977 TCRBV5S4A2TA0A5A2 114 aa12.85□□□□□ -0.35
NSL1-202ENST00000366977 PDE8BO95263 885 aa12.85□□□□□ -0.35
NSL1-202ENST00000366977 PDIA4P13667 645 aaKnown RBP12.85□□□□□ -0.35
NSL1-202ENST00000366977 FAM160A1Q05DH4 1040 aa12.85□□□□□ -0.35
NSL1-202ENST00000366977 RALYLQ86SE5 291 aaKnown RBP12.85□□□□□ -0.35
NSL1-202ENST00000366977 DZIP3Q86Y13 1208 aaKnown RBP12.85□□□□□ -0.35
NSL1-202ENST00000366977 FBXO18Q8NFZ0 1043 aa12.85□□□□□ -0.35
NSL1-202ENST00000366977 ZNF396Q96N95 335 aaPredicted RBP12.85□□□□□ -0.35
NSL1-202ENST00000366977 ARMT1Q9H993 441 aa12.85□□□□□ -0.35
NSL1-202ENST00000366977 PODXL2Q9NZ53 605 aa12.85□□□□□ -0.35
NSL1-202ENST00000366977 RANBP6O60518 1105 aaKnown RBP12.85□□□□□ -0.35
NSL1-202ENST00000366977 KIF23Q02241 960 aaPredicted RBP12.85□□□□□ -0.35
NSL1-202ENST00000366977 STK38Q15208 465 aa12.85□□□□□ -0.35
NSL1-202ENST00000366977 MYSM1Q5VVJ2 828 aa12.85□□□□□ -0.35
NSL1-202ENST00000366977 RTEL1Q9NZ71 1219 aa12.85□□□□□ -0.35
NSL1-202ENST00000366977 CTNNA3Q9UI47 895 aa12.85□□□□□ -0.35
NSL1-202ENST00000366977 BCL9O00512 1426 aa12.85□□□□□ -0.35
NSL1-202ENST00000366977 KINO60870 393 aaKnown RBP12.84□□□□□ -0.35
NSL1-202ENST00000366977 MRPS27Q92552 414 aaKnown RBP12.84□□□□□ -0.35
NSL1-202ENST00000366977 CLIC6Q96NY7 704 aa12.84□□□□□ -0.35
NSL1-202ENST00000366977 BCL2L12Q9HB09 334 aa12.84□□□□□ -0.35
NSL1-202ENST00000366977 FAM217BQ9NTX9 383 aaPredicted RBP12.84□□□□□ -0.35
NSL1-202ENST00000366977 TAF1P21675 1872 aa12.84□□□□□ -0.35
NSL1-202ENST00000366977 CDHR2Q9BYE9 1310 aa12.84□□□□□ -0.35
NSL1-202ENST00000366977 SH2B2O14492 632 aaPredicted RBP12.84□□□□□ -0.35
NSL1-202ENST00000366977 CPLX1O14810 134 aa12.84□□□□□ -0.35
NSL1-202ENST00000366977 ZFYP08048 801 aaPredicted RBP12.84□□□□□ -0.35
NSL1-202ENST00000366977 GUCY1A2P33402 732 aa12.84□□□□□ -0.35
NSL1-202ENST00000366977 KCNQ4P56696 695 aa12.84□□□□□ -0.35
NSL1-202ENST00000366977 RASGRF1Q13972 1273 aa12.84□□□□□ -0.35
NSL1-202ENST00000366977 STX1AQ16623 288 aa12.84□□□□□ -0.35
NSL1-202ENST00000366977 FILIP1Q7Z7B0 1213 aa12.84□□□□□ -0.35
NSL1-202ENST00000366977 SMAP1Q8IYB5 467 aaPredicted RBP12.84□□□□□ -0.35
NSL1-202ENST00000366977 CCDC82Q8N4S0 544 aa12.84□□□□□ -0.35
NSL1-202ENST00000366977 MAGEB6Q8N7X4 407 aa12.84□□□□□ -0.35
NSL1-202ENST00000366977 ANKRD36CQ5JPF3 1778 aa12.84□□□□□ -0.35
NSL1-202ENST00000366977 BCAMP50895 628 aa12.83□□□□□ -0.36
NSL1-202ENST00000366977 SPECC1Q5M775 1068 aa12.83□□□□□ -0.36
NSL1-202ENST00000366977 AXDND1Q5T1B0 1012 aaPredicted RBP12.83□□□□□ -0.36
NSL1-202ENST00000366977 STRBPQ96SI9 672 aaKnown RBP12.83□□□□□ -0.36
NSL1-202ENST00000366977 SPTLC2O15270 562 aa12.83□□□□□ -0.36
NSL1-202ENST00000366977 MBD4O95243 580 aa12.83□□□□□ -0.36
NSL1-202ENST00000366977 SF3A1Q15459 793 aaKnown RBP12.83□□□□□ -0.36
NSL1-202ENST00000366977 NBPF11Q86T75 865 aa12.83□□□□□ -0.36
NSL1-202ENST00000366977 MIGA1Q8NAN2 632 aa12.83□□□□□ -0.36
NSL1-202ENST00000366977 SDF4Q9BRK5 362 aa12.83□□□□□ -0.36
NSL1-202ENST00000366977 ALG1Q9BT22 464 aa12.83□□□□□ -0.36
NSL1-202ENST00000366977 GOLGA6L6A8MZA4 724 aa12.82□□□□□ -0.36
NSL1-202ENST00000366977 GOLGA6L19H0YKK7 550 aa12.82□□□□□ -0.36
NSL1-202ENST00000366977 PDE8AO60658 829 aa12.82□□□□□ -0.36
NSL1-202ENST00000366977 FGFR2P21802 821 aa12.82□□□□□ -0.36
NSL1-202ENST00000366977 METAP2P50579 478 aaKnown RBP eCLIP12.82□□□□□ -0.36
NSL1-202ENST00000366977 EVX2Q03828 476 aa12.82□□□□□ -0.36
NSL1-202ENST00000366977 ADALQ6DHV7 355 aa12.82□□□□□ -0.36
NSL1-202ENST00000366977 APOA5Q6Q788 366 aa12.82□□□□□ -0.36
NSL1-202ENST00000366977 LCORLQ8N3X6 602 aa12.82□□□□□ -0.36
NSL1-202ENST00000366977 FBXL16Q8N461 479 aa12.82□□□□□ -0.36
NSL1-202ENST00000366977 IGDCC4Q8TDY8 1250 aa12.82□□□□□ -0.36
NSL1-202ENST00000366977 DISP2A7MBM2 1401 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms