RNA–Protein interactions for RNA: ENST00000366857.9

CNIH4-202, Transcript of cornichon family AMPA receptor auxiliary protein 4, humanhuman

TSL 1 (best) BASIC

Gene CNIH4, Length 3,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4-202ENST00000366857 NEK4P51957 841 aa11.16□□□□□ -0.62
CNIH4-202ENST00000366857 TTF1Q15361 905 aaPredicted RBP11.16□□□□□ -0.62
CNIH4-202ENST00000366857 NSFL1CQ9UNZ2 370 aaKnown RBP11.16□□□□□ -0.62
CNIH4-202ENST00000366857 GPSM2P81274 684 aa11.16□□□□□ -0.62
CNIH4-202ENST00000366857 ZNF274Q96GC6 653 aaPredicted RBP11.16□□□□□ -0.62
CNIH4-202ENST00000366857 FUCA2Q9BTY2 467 aa11.16□□□□□ -0.62
CNIH4-202ENST00000366857 GPAA1O43292 621 aa11.15□□□□□ -0.62
CNIH4-202ENST00000366857 METTL24Q5JXM2 366 aa11.15□□□□□ -0.62
CNIH4-202ENST00000366857 GIMAP6Q6P9H5 292 aa11.15□□□□□ -0.62
CNIH4-202ENST00000366857 FSD1Q9BTV5 496 aa11.15□□□□□ -0.62
CNIH4-202ENST00000366857 PGAP2Q9UHJ9 254 aa11.15□□□□□ -0.62
CNIH4-202ENST00000366857 PPP4CP60510 307 aa11.15□□□□□ -0.62
CNIH4-202ENST00000366857 RPS8P62241 208 aaKnown RBP11.15□□□□□ -0.62
CNIH4-202ENST00000366857 UPF3BQ9BZI7 483 aaKnown RBP11.15□□□□□ -0.62
CNIH4-202ENST00000366857 CASTP20810 708 aaKnown RBP11.15□□□□□ -0.63
CNIH4-202ENST00000366857 METTL16Q86W50 562 aaKnown RBP11.15□□□□□ -0.63
CNIH4-202ENST00000366857 HSCBQ8IWL3 235 aa11.15□□□□□ -0.63
CNIH4-202ENST00000366857 ANKS1AQ92625 1134 aa11.15□□□□□ -0.63
CNIH4-202ENST00000366857 PATL2C9JE40 543 aaKnown RBP11.14□□□□□ -0.63
CNIH4-202ENST00000366857 LCORLQ8N3X6 602 aa11.14□□□□□ -0.63
CNIH4-202ENST00000366857 NSUN7Q8NE18 718 aaKnown RBP11.14□□□□□ -0.63
CNIH4-202ENST00000366857 LY9Q9HBG7 655 aa11.14□□□□□ -0.63
CNIH4-202ENST00000366857 SENP2Q9HC62 589 aa11.14□□□□□ -0.63
CNIH4-202ENST00000366857 ATRNL1Q5VV63 1379 aa11.14□□□□□ -0.63
CNIH4-202ENST00000366857 SBK1Q52WX2 424 aa11.14□□□□□ -0.63
CNIH4-202ENST00000366857 BRIP1Q9BX63 1249 aa11.14□□□□□ -0.63
CNIH4-202ENST00000366857 PDIA3P30101 505 aaKnown RBP11.14□□□□□ -0.63
CNIH4-202ENST00000366857 RBM43Q6ZSC3 357 aaKnown RBP11.14□□□□□ -0.63
CNIH4-202ENST00000366857 CHAMP1Q96JM3 812 aa11.14□□□□□ -0.63
CNIH4-202ENST00000366857 SETDB2Q96T68 719 aa11.14□□□□□ -0.63
CNIH4-202ENST00000366857 RHBDL3P58872 404 aa11.13□□□□□ -0.63
CNIH4-202ENST00000366857 SH2B1Q9NRF2 756 aaPredicted RBP11.13□□□□□ -0.63
CNIH4-202ENST00000366857 DIAPH3Q9NSV4 1193 aa11.13□□□□□ -0.63
CNIH4-202ENST00000366857 LEMD3Q9Y2U8 911 aa11.13□□□□□ -0.63
CNIH4-202ENST00000366857 FKBP1AP62942 108 aaKnown RBP11.13□□□□□ -0.63
CNIH4-202ENST00000366857 DHX32Q7L7V1 743 aaKnown RBP11.13□□□□□ -0.63
CNIH4-202ENST00000366857 HELBQ8NG08 1087 aaPredicted RBP11.13□□□□□ -0.63
CNIH4-202ENST00000366857 CCDC85AQ96PX6 553 aaPredicted RBP11.13□□□□□ -0.63
CNIH4-202ENST00000366857 SH2B2O14492 632 aaPredicted RBP11.13□□□□□ -0.63
CNIH4-202ENST00000366857 ST18O60284 1047 aa11.13□□□□□ -0.63
CNIH4-202ENST00000366857 SERPINB2P05120 415 aa11.13□□□□□ -0.63
CNIH4-202ENST00000366857 CCDC158Q5M9N0 1113 aa11.13□□□□□ -0.63
CNIH4-202ENST00000366857 SP8Q8IXZ3 490 aa11.13□□□□□ -0.63
CNIH4-202ENST00000366857 LLPHQ9BRT6 129 aaKnown RBP11.13□□□□□ -0.63
CNIH4-202ENST00000366857 HSP90B1P14625 803 aaKnown RBP11.12□□□□□ -0.63
CNIH4-202ENST00000366857 RCAN1P53805 252 aa11.12□□□□□ -0.63
CNIH4-202ENST00000366857 RESTQ13127 1097 aa11.12□□□□□ -0.63
CNIH4-202ENST00000366857 NPY5RQ15761 445 aa11.12□□□□□ -0.63
CNIH4-202ENST00000366857 TPTE2Q6XPS3 522 aa11.12□□□□□ -0.63
CNIH4-202ENST00000366857 SYT1P21579 422 aa11.12□□□□□ -0.63
CNIH4-202ENST00000366857 GYG1P46976 350 aa11.12□□□□□ -0.63
CNIH4-202ENST00000366857 NEK1Q96PY6 1258 aa11.12□□□□□ -0.63
CNIH4-202ENST00000366857 MYH7BA7E2Y1 1941 aa11.12□□□□□ -0.63
CNIH4-202ENST00000366857 ANKRD18AQ8IVF6 992 aa11.12□□□□□ -0.63
CNIH4-202ENST00000366857 PDRG1Q9NUG6 133 aa11.12□□□□□ -0.63
CNIH4-202ENST00000366857 ATP6V0A2Q9Y487 856 aa11.12□□□□□ -0.63
CNIH4-202ENST00000366857 ELP1O95163 1332 aa11.11□□□□□ -0.63
CNIH4-202ENST00000366857 IFNL3Q8IZI9 196 aa11.11□□□□□ -0.63
CNIH4-202ENST00000366857 ZSCAN31Q96LW9 406 aaPredicted RBP11.11□□□□□ -0.63
CNIH4-202ENST00000366857 COL11A1P12107 1806 aaPredicted RBP11.11□□□□□ -0.63
CNIH4-202ENST00000366857 IGKV6D-41A0A0C4DH26 115 aa11.11□□□□□ -0.63
CNIH4-202ENST00000366857 KRT32Q14532 448 aa11.11□□□□□ -0.63
CNIH4-202ENST00000366857 SLC35G1Q2M3R5 365 aa11.11□□□□□ -0.63
CNIH4-202ENST00000366857 TTC39AQ5SRH9 613 aa11.11□□□□□ -0.63
CNIH4-202ENST00000366857 TBC1D16Q8TBP0 767 aa11.11□□□□□ -0.63
CNIH4-202ENST00000366857 JAKMIP1Q96N16 626 aaKnown RBP11.11□□□□□ -0.63
CNIH4-202ENST00000366857 DNAJC2Q99543 621 aaKnown RBP11.11□□□□□ -0.63
CNIH4-202ENST00000366857 MRIQ9BWK5 157 aa11.11□□□□□ -0.63
CNIH4-202ENST00000366857 M0R2N6 131 aa11.11□□□□□ -0.63
CNIH4-202ENST00000366857 ANKRD2Q9GZV1 360 aa11.11□□□□□ -0.63
CNIH4-202ENST00000366857 GPHNQ9NQX3 736 aaPredicted RBP11.11□□□□□ -0.63
CNIH4-202ENST00000366857 XDHP47989 1333 aa11.11□□□□□ -0.63
CNIH4-202ENST00000366857 OS9Q13438 667 aaPredicted RBP11.1□□□□□ -0.63
CNIH4-202ENST00000366857 RCSD1Q6JBY9 416 aa11.1□□□□□ -0.63
CNIH4-202ENST00000366857 CERS5Q8N5B7 392 aa11.1□□□□□ -0.63
CNIH4-202ENST00000366857 LIFRP42702 1097 aa11.1□□□□□ -0.63
CNIH4-202ENST00000366857 MECOMQ03112 1051 aa11.1□□□□□ -0.63
CNIH4-202ENST00000366857 GABPAQ06546 454 aa11.1□□□□□ -0.63
CNIH4-202ENST00000366857 CTR9Q6PD62 1173 aa11.1□□□□□ -0.63
CNIH4-202ENST00000366857 GAS2L3Q86XJ1 694 aa11.1□□□□□ -0.63
CNIH4-202ENST00000366857 PDGFDQ9GZP0 370 aaPredicted RBP11.1□□□□□ -0.63
CNIH4-202ENST00000366857 PRKAB2O43741 272 aa11.1□□□□□ -0.63
CNIH4-202ENST00000366857 RANBP6O60518 1105 aaKnown RBP11.1□□□□□ -0.63
CNIH4-202ENST00000366857 HMGB1P09429 215 aaKnown RBP11.1□□□□□ -0.63
CNIH4-202ENST00000366857 ZNF445P59923 1031 aa11.1□□□□□ -0.63
CNIH4-202ENST00000366857 SLKQ9H2G2 1235 aaPredicted RBP11.1□□□□□ -0.63
CNIH4-202ENST00000366857 FAM237AA0A1B0GTK4 181 aa11.09□□□□□ -0.63
CNIH4-202ENST00000366857 Q6ZUG5 572 aa11.09□□□□□ -0.63
CNIH4-202ENST00000366857 TNFRSF25Q93038 417 aa11.09□□□□□ -0.63
CNIH4-202ENST00000366857 CYP46A1Q9Y6A2 500 aa11.09□□□□□ -0.63
CNIH4-202ENST00000366857 KLHL40Q2TBA0 621 aa11.09□□□□□ -0.63
CNIH4-202ENST00000366857 SLC9C2Q5TAH2 1124 aa11.09□□□□□ -0.63
CNIH4-202ENST00000366857 STYK1Q6J9G0 422 aa11.09□□□□□ -0.63
CNIH4-202ENST00000366857 TMC4Q7Z404 712 aa11.09□□□□□ -0.63
CNIH4-202ENST00000366857 ZBED3Q96IU2 234 aaPredicted RBP11.09□□□□□ -0.63
CNIH4-202ENST00000366857 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.09□□□□□ -0.63
CNIH4-202ENST00000366857 GPR75-ASB3A0A0A6YYF3 556 aa11.09□□□□□ -0.63
CNIH4-202ENST00000366857 ORC4O43929 436 aa11.09□□□□□ -0.63
CNIH4-202ENST00000366857 BBOX1O75936 387 aa11.09□□□□□ -0.63
CNIH4-202ENST00000366857 RXRBP28702 533 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms